Experiment set21IT020 for Burkholderia phytofirmans PsJN

200 most detrimental genes:

gene	name	fitness	t score	description
BPHYT_RS20380		+3.7	9.5	LysR family transcriptional regulator
BPHYT_RS07920		+2.7	6.7	hypothetical protein
BPHYT_RS07400		+2.5	6.8	hypothetical protein
BPHYT_RS13565		+2.2	2.2	bacterioferritin
BPHYT_RS31890		+2.2	3.0	transposase
BPHYT_RS08030		+2.1	1.9	transposase
BPHYT_RS26105		+2.0	5.6	hypothetical protein
BPHYT_RS23645		+2.0	3.1	phosphohydrolase
BPHYT_RS10690		+1.9	2.3	Rieske (2Fe-2S) protein
BPHYT_RS05705		+1.9	2.3	hypothetical protein
BPHYT_RS08615		+1.8	2.4	hypothetical protein
BPHYT_RS17590		+1.7	5.6	hypothetical protein
BPHYT_RS19325		+1.7	1.4	glycine cleavage system H protein
BPHYT_RS26715		+1.7	1.7	GTP-binding protein
BPHYT_RS10260		+1.7	2.7	hypothetical protein
BPHYT_RS02660		+1.6	2.2	membrane protein
BPHYT_RS28660		+1.6	2.2	polyvinylalcohol dehydrogenase
BPHYT_RS05620		+1.6	1.8	CsbD family protein
BPHYT_RS11965		+1.5	4.5	alkylhydroperoxidase
BPHYT_RS34500		+1.5	1.4	hypothetical protein
BPHYT_RS26075		+1.5	1.0	ABC transporter permease
BPHYT_RS28910		+1.5	2.6	diguanylate phosphodiesterase
BPHYT_RS13470		+1.4	1.2	arylsulfate sulfotransferase
BPHYT_RS29175		+1.4	2.9	ABC transporter ATP-binding protein
BPHYT_RS22500		+1.4	1.2	transcriptional regulator
BPHYT_RS10500		+1.4	1.7	acetolactate synthase
BPHYT_RS33070		+1.4	2.3	haloacid dehalogenase
BPHYT_RS09510		+1.4	4.4	amino acid dehydrogenase
BPHYT_RS25770		+1.4	1.9	hypothetical protein
BPHYT_RS24065		+1.4	1.9	glucose-methanol-choline oxidoreductase
BPHYT_RS12280		+1.4	2.2	RNA helicase
BPHYT_RS35230		+1.4	1.9	type 11 methyltransferase
BPHYT_RS20465		+1.4	1.2	LysR family transcriptional regulator
BPHYT_RS35675		+1.3	1.7	short-chain dehydrogenase
BPHYT_RS08250		+1.3	1.2	hypothetical protein
BPHYT_RS17490		+1.3	0.8	haloacid dehalogenase
BPHYT_RS19435		+1.3	2.6	16S rRNA methyltransferase
BPHYT_RS15015		+1.3	1.6	ArsR family transcriptional regulator
BPHYT_RS07660		+1.3	3.0	sulfonate ABC transporter substrate-binding protein
BPHYT_RS11680		+1.3	1.9	protein-L-isoaspartate O-methyltransferase
BPHYT_RS07900		+1.3	1.7	hypothetical protein
BPHYT_RS29065		+1.3	1.8	hypothetical protein
BPHYT_RS30440		+1.3	1.1	short-chain dehydrogenase
BPHYT_RS27060		+1.3	1.8	photosystem reaction center subunit H
BPHYT_RS24975		+1.2	2.1	RNA polymerase sigma24 factor
BPHYT_RS22685		+1.2	2.4	shikimate 5-dehydrogenase
BPHYT_RS25875		+1.2	1.6	type III secretion protein
BPHYT_RS35605		+1.2	1.2	LysR family transcriptional regulator
BPHYT_RS03455		+1.2	2.0	paraquat-inducible protein A
BPHYT_RS30265		+1.2	1.4	hypothetical protein
BPHYT_RS18990		+1.2	2.4	chemotaxis protein
BPHYT_RS00885		+1.2	2.6	chemotaxis protein CheY
BPHYT_RS25815		+1.2	1.2	deoxyribose-phosphate aldolase
BPHYT_RS33135		+1.2	2.5	LysR family transcriptional regulator
BPHYT_RS22055		+1.2	2.4	DNA-binding protein
BPHYT_RS08360		+1.2	2.2	LysR family transcriptional regulator
BPHYT_RS09850		+1.2	1.1	molybdopterin oxidoreductase
BPHYT_RS15565		+1.2	2.9	membrane protein
BPHYT_RS36540		+1.2	1.2	hypothetical protein
BPHYT_RS03025		+1.2	2.3	methyl-accepting chemotaxis protein
BPHYT_RS36175		+1.1	2.5	hypothetical protein
BPHYT_RS29820		+1.1	1.4	hypothetical protein
BPHYT_RS20185		+1.1	1.5	sugar transferase
BPHYT_RS20095		+1.1	0.7	transcriptional regulator
BPHYT_RS03925		+1.1	1.3	LysR family transcriptional regulator
BPHYT_RS03830		+1.1	1.7	hypothetical protein
BPHYT_RS31400		+1.1	1.0	methyl-accepting chemotaxis protein
BPHYT_RS21575		+1.1	2.3	hypothetical protein
BPHYT_RS31240		+1.1	1.9	cytochrome C550
BPHYT_RS25970		+1.1	1.0	urea amidolyase
BPHYT_RS34295		+1.1	1.0	fimbrial protein
BPHYT_RS10115		+1.1	1.1	hypothetical protein
BPHYT_RS34700		+1.1	1.8	arsenate reductase
BPHYT_RS27145		+1.1	2.0	TetR family transcriptional regulator
BPHYT_RS27065		+1.1	1.4	hypothetical protein
BPHYT_RS04995		+1.1	2.9	hypothetical protein
BPHYT_RS29720		+1.1	1.3	molybdopterin-guanine dinucleotide biosynthesis protein MobA
BPHYT_RS02875		+1.1	1.8	adenine glycosylase
BPHYT_RS22045		+1.1	1.4	peptide ABC transporter permease
BPHYT_RS20665		+1.0	1.2	LysR family transcriptional regulator
BPHYT_RS11540		+1.0	1.4	ureidoglycolate hydrolase
BPHYT_RS02755		+1.0	1.1	cyd operon protein YbgT
BPHYT_RS05285		+1.0	1.4	hypothetical protein
BPHYT_RS08765		+1.0	0.9	ABC transporter ATP-binding protein
BPHYT_RS18710		+1.0	1.0	membrane protein
BPHYT_RS10435		+1.0	2.4	ThiJ/PfpI domain-containing protein
BPHYT_RS25325		+1.0	1.9	SARP family transcriptional regulator
BPHYT_RS25210		+1.0	1.3	drug:proton antiporter
BPHYT_RS28965		+1.0	1.2	hypothetical protein
BPHYT_RS32525		+1.0	1.4	hypothetical protein
BPHYT_RS10470		+1.0	1.9	hypothetical protein
BPHYT_RS22835		+1.0	0.7	flagellar motor protein MotA
BPHYT_RS26185		+1.0	1.2	thioesterase
BPHYT_RS04035		+1.0	1.5	transferase
BPHYT_RS02070		+1.0	2.1	hypothetical protein
BPHYT_RS13835		+1.0	0.9	S-adenosylhomocysteine nucleosidase
BPHYT_RS03280		+1.0	1.4	mannose-1-phosphate guanylyltransferase
BPHYT_RS04715		+1.0	1.9	branched-chain amino acid ABC transporter substrate-binding protein
BPHYT_RS25065		+1.0	1.2	glycine/betaine ABC transporter ATPase
BPHYT_RS09280		+1.0	1.0	pyridoxal-5'-phosphate-dependent protein subunit beta
BPHYT_RS22195		+1.0	1.1	hypothetical protein
BPHYT_RS20840		+1.0	1.5	beta-lactamase
BPHYT_RS25145		+1.0	2.3	cupin
BPHYT_RS24925		+1.0	1.1	cytochrome O ubiquinol oxidase
BPHYT_RS29825		+1.0	1.3	glycosyl transferase family 1
BPHYT_RS21630		+1.0	2.5	NmrA family transcriptional regulator
BPHYT_RS14900		+1.0	2.0	prephenate dehydrogenase
BPHYT_RS27830		+1.0	2.0	universal stress protein A
BPHYT_RS07605		+1.0	1.7	hypothetical protein
BPHYT_RS32925		+1.0	0.9	nitrilotriacetate monooxygenase component A
BPHYT_RS31785		+0.9	2.1	hypothetical protein
BPHYT_RS35480		+0.9	2.1	salicylyl-CoA 5-hydroxylase
BPHYT_RS21725		+0.9	1.1	taurine ABC transporter substrate-binding protein
BPHYT_RS17505		+0.9	2.7	transcriptional regulator
BPHYT_RS07385		+0.9	1.5	glycosyl transferase family 1
BPHYT_RS23630		+0.9	2.3	hypothetical protein
BPHYT_RS29915		+0.9	1.9	GntR family transcriptional regulator
BPHYT_RS36480		+0.9	1.3	hypothetical protein
BPHYT_RS08405		+0.9	1.0	hypothetical protein
BPHYT_RS25370		+0.9	1.5	acyl-CoA dehydrogenase
BPHYT_RS15985		+0.9	1.9	thioredoxin
BPHYT_RS10400		+0.9	0.8	taurine ABC transporter permease
BPHYT_RS13320		+0.9	0.9	allantoate amidohydrolase
BPHYT_RS21080		+0.9	2.3	(2Fe-2S)-binding protein
BPHYT_RS12530		+0.9	1.8	ATP phosphoribosyltransferase regulatory subunit
BPHYT_RS27155		+0.9	1.2	peroxiredoxin
BPHYT_RS24170		+0.9	1.2	gluconolactonase
BPHYT_RS17405		+0.9	0.8	indole-3-glycerol phosphate synthase
BPHYT_RS29540		+0.9	0.9	aldolase
BPHYT_RS25140		+0.9	2.9	hypothetical protein
BPHYT_RS19925		+0.9	1.7	peptidase C39
BPHYT_RS30485		+0.9	1.0	ABC transporter ATP-binding protein
BPHYT_RS36220		+0.9	0.9	hypothetical protein
BPHYT_RS00920		+0.9	2.3	transposase
BPHYT_RS35545		+0.9	1.7	cobalt-containing nitrile hydratase subunit alpha
BPHYT_RS25830		+0.9	1.2	sugar ABC transporter substrate-binding protein
BPHYT_RS11515		+0.9	1.9	LysR family transcriptional regulator
BPHYT_RS04140		+0.9	1.7	polysaccharide biosynthesis protein
BPHYT_RS03520		+0.9	0.9	ATP--cobalamin adenosyltransferase
BPHYT_RS06390		+0.9	1.3	ribosome-associated protein IOJAP
BPHYT_RS27270		+0.9	1.7	photosystem reaction center subunit H
BPHYT_RS13940		+0.9	2.4	ABC transporter
BPHYT_RS00770		+0.9	0.8	conjugal transfer protein TraC
BPHYT_RS21215		+0.9	2.0	Crp/Fnr family transcriptional regulator
BPHYT_RS25075		+0.9	0.7	AraC family transcriptional regulator
BPHYT_RS08745		+0.8	2.1	hypothetical protein
BPHYT_RS08410		+0.8	0.9	dehydrogenase
BPHYT_RS02410		+0.8	2.4	alpha/beta hydrolase
BPHYT_RS07795		+0.8	1.4	IclR family transcriptional regulator
BPHYT_RS09525		+0.8	3.2	toxin HipA
BPHYT_RS04010		+0.8	0.8	glycosyl transferase
BPHYT_RS07080		+0.8	1.9	glutathione S-transferase
BPHYT_RS36580		+0.8	2.3	hypothetical protein
BPHYT_RS18890		+0.8	2.8	flagellar basal body rod protein FlgC
BPHYT_RS19760		+0.8	1.7	AraC family transcriptional regulator
BPHYT_RS01790		+0.8	5.4	LuxR family transcriptional regulator
BPHYT_RS02435		+0.8	0.9	hypothetical protein
BPHYT_RS10230		+0.8	2.2	hypothetical protein
BPHYT_RS24690		+0.8	3.5	ionic transporter y4hA
BPHYT_RS20165		+0.8	0.7	UDP-N-acetyl-D-mannosamine dehydrogenase
BPHYT_RS26200		+0.8	1.9	acetate kinase
BPHYT_RS26995		+0.8	2.4	peptidase S10
BPHYT_RS03730		+0.8	1.5	transcriptional repressor NrdR
BPHYT_RS04910		+0.8	1.0	phenylacetic acid degradation protein
BPHYT_RS27865		+0.8	1.8	ATPase
BPHYT_RS10915		+0.8	2.1	radical SAM protein
BPHYT_RS32470		+0.8	1.1	membrane protein
BPHYT_RS07325		+0.8	0.6	GntR family transcriptional regulator
BPHYT_RS30880		+0.8	1.5	peptidase S13
BPHYT_RS31830		+0.8	1.6	hypothetical protein
BPHYT_RS20150		+0.8	0.9	glycosyl transferase family 1
BPHYT_RS04985		+0.8	1.5	hypothetical protein
BPHYT_RS30260		+0.8	1.6	hypothetical protein
BPHYT_RS26055		+0.8	1.1	ABC transporter substrate-binding protein
BPHYT_RS24740		+0.8	2.2	RNA polymerase subunit sigma-24
BPHYT_RS11005		+0.8	1.4	chromate transporter
BPHYT_RS24630		+0.8	1.0	(2Fe-2S)-binding protein
BPHYT_RS20475		+0.8	1.5	hypothetical protein
BPHYT_RS08135		+0.8	0.8	hypothetical protein
BPHYT_RS21955		+0.8	1.8	acetyl-CoA acetyltransferase
BPHYT_RS30635		+0.8	1.6	D-aminopeptidase
BPHYT_RS28215		+0.8	1.1	D-ribose transporter ATP binding protein
BPHYT_RS09905		+0.8	0.9	hypothetical protein
BPHYT_RS01395		+0.8	2.7	tRNA-Arg
BPHYT_RS07545		+0.8	1.5	epimerase
BPHYT_RS03495		+0.8	1.7	hypothetical protein
BPHYT_RS31205		+0.8	1.4	peptide ABC transporter ATP-binding protein
BPHYT_RS22340		+0.8	2.1	methionine sulfoxide reductase A
BPHYT_RS15010		+0.8	2.1	cation transporter
BPHYT_RS13105		+0.8	1.1	LacI family transcription regulator
BPHYT_RS26730		+0.8	1.8	membrane protein
BPHYT_RS22820		+0.8	0.8	hydrolase
BPHYT_RS23100		+0.8	1.2	sugar ABC transporter substrate-binding protein
BPHYT_RS06050		+0.8	2.7	membrane protein
BPHYT_RS30675		+0.8	2.2	LysR family transcriptional regulator
BPHYT_RS07690		+0.7	0.8	AraC family transcriptional regulator
BPHYT_RS10560		+0.7	1.4	hypothetical protein
BPHYT_RS00105		+0.7	1.6	ethanolamine ammonia lyase large subunit
BPHYT_RS12265		+0.7	0.6	alanine acetyltransferase
BPHYT_RS22635		+0.7	1.9	dihydrodipicolinate synthase

Specific Phenotypes

For 3 genes in this experiment