Experiment set20IT035 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Post-colonization (Day 12) - Cage3;Mouse1

200 most important genes:

  gene name fitness t score description  
BT0892 -5.3 -3.6 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT3933 -4.9 -5.9 prephenate dehydrogenase (EC 1.3.1.13) (from data) compare
BT1843 -4.9 -3.4 adenylosuccinate synthetase (NCBI ptt file) compare
BT3688 -4.8 -8.7 putative acetyltransferase (NCBI ptt file) compare
BT1607 -4.8 -3.3 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT3320 -4.8 -3.3 dihydrodipicolinate reductase (NCBI ptt file) compare
BT1757 -4.6 -7.6 fructokinase (NCBI ptt file) compare
BT1374 -4.3 -3.0 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) compare
BT2396 -4.3 -5.1 putative membrane transporter involved in nicotinamide mononucleotide transport (NCBI ptt file) compare
BT0547 -3.9 -2.7 aspartate aminotransferase (NCBI ptt file) compare
BT3253 -3.9 -2.7 phosphoribosylamine--glycine ligase (NCBI ptt file) compare
BT1375 -3.8 -4.6 aspartokinase (NCBI ptt file) compare
BT0700 -3.8 -2.6 GTP pyrophosphokinase (NCBI ptt file) compare
BT0155 -3.8 -3.7 putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) compare
BT0556 -3.8 -2.6 carbamoyl phosphate synthetase III (glutamine-hydrolyzing) (NCBI ptt file) compare
BT2390 -3.7 -12.5 conserved hypothetical protein (NCBI ptt file) compare
BT1746 -3.7 -2.5 conserved hypothetical protein (NCBI ptt file) compare
BT1758 -3.7 -3.6 fructose transporter (from data) compare
BT0555 -3.7 -5.6 amidophosphoribosyltransferase (NCBI ptt file) compare
BT0891 -3.6 -2.5 dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) compare
BT3821 -3.6 -12.0 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) compare
BT3733 -3.5 -11.9 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
p5482_02 -3.5 -5.3 hypothetical protein (NCBI) compare
BT0557 -3.5 -7.1 carbamyl phosphate synthetase (NCBI ptt file) compare
BT0180 -3.5 -8.1 5-methyltetrahydrofolate-homocysteine methyltransferase (NCBI ptt file) compare
BT1733 -3.4 -2.4 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) compare
BT2397 -3.4 -8.3 conserved hypothetical protein (NCBI ptt file) compare
BT0156 -3.3 -2.3 transcriptional regulator (NCBI ptt file) compare
BT1747 -3.3 -2.3 pyruvate-flavodoxin oxidoreductase (NCBI ptt file) compare
BT2843 -3.2 -2.2 integrase (NCBI ptt file) compare
BT0370 -3.2 -5.3 galactokinase (NCBI ptt file) compare
BT4191 -3.2 -6.4 hypothetical protein (NCBI ptt file) compare
BT1222 -3.1 -2.1 6-phosphogluconate dehydrogenase,decarboxylating (NCBI ptt file) compare
BT4211 -3.1 -2.1 putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) compare
BT1082 -3.1 -12.7 Na+/solute symporter (NCBI ptt file) compare
BT1536 -3.1 -4.6 ABC transporter permease (NCBI ptt file) compare
BT0548 -3.0 -2.1 diaminopimelate epimerase (NCBI ptt file) compare
BT1347 -2.9 -3.5 conserved hypothetical protein (NCBI ptt file) compare
BT1954 -2.9 -4.0 putative surface layer protein (NCBI ptt file) compare
BT4610 -2.9 -2.8 RecA (NCBI ptt file) compare
BT3936 -2.8 -1.9 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) compare
BT2938 -2.8 -3.3 putative glycosyltransferase (NCBI ptt file) compare
BT1955 -2.7 -9.3 putative cell wall biogenesis protein (NCBI ptt file) compare
BT3981 -2.7 -1.9 hypothetical protein (NCBI ptt file) compare
BT0527 -2.7 -4.0 tryptophan synthase alpha chain (NCBI ptt file) compare
BT2415 -2.6 -11.9 aspartate aminotransferase (NCBI ptt file) compare
BT3712 -2.6 -5.5 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) compare
BT0529 -2.6 -3.9 indole-3-glycerol phosphate synthase (NCBI ptt file) compare
BT3935 -2.6 -4.3 aminotransferase (NCBI ptt file) compare
BT2167 -2.6 -12.4 elongation factor G (NCBI ptt file) compare
BT4049 -2.6 -6.3 putative ArgK protein with ATPase and kinase domains (NCBI ptt file) compare
BT4720 -2.6 -4.5 putative RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1355 -2.6 -4.7 hypothetical protein (NCBI ptt file) compare
BT3072 -2.5 -5.6 collagenase precursor (NCBI ptt file) compare
BT1956 -2.5 -5.6 putative cell surface protein (NCBI ptt file) compare
BT1953 -2.5 -7.0 putative TonB-linked outer membrane receptor (NCBI ptt file) compare
BT4551 -2.5 -1.7 putative GTPase, ThdF family (NCBI ptt file) compare
BT1270 -2.5 -5.5 putative Na+/H+ antiporter (NCBI ptt file) compare
BT0619 -2.5 -1.7 Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfD (NCBI ptt file) compare
BT4644 -2.5 -2.4 putative anti-sigma factor (NCBI ptt file) compare
BT1339 -2.4 -5.4 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase (NCBI ptt file) compare
BT1127 -2.4 -2.4 mobilization protein BmgB (NCBI ptt file) compare
BT4599 -2.4 -5.9 putative transcriptional regulator (NCBI ptt file) compare
BT4322 -2.4 -2.8 conserved hypothetical protein, with a diacylglycerol kinase catalytic domain (NCBI ptt file) compare
BT1346 -2.4 -4.0 capsule biosynthesis protein capA (NCBI ptt file) compare
BT0728 -2.4 -4.2 transcriptional regulator (NCBI ptt file) compare
BT0352 -2.4 -2.3 conserved hypothetical protein (NCBI ptt file) compare
BT0771 -2.4 -3.6 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) (NCBI ptt file) compare
BT3363 -2.4 -2.2 lipopolysaccharide core biosynthesis protein LpsA (NCBI ptt file) compare
BT1345 -2.3 -3.2 glycosyltransferase (NCBI ptt file) compare
BT2403 -2.3 -12.1 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) compare
BT1957 -2.3 -9.1 hypothetical protein (NCBI ptt file) compare
BT0146 -2.3 -9.1 unsaturated glucuronyl hydrolase (NCBI ptt file) compare
BT1356 -2.3 -3.1 putative capsule polysaccharide export protein (NCBI ptt file) compare
BT1342 -2.3 -4.8 putative UDP-glucuronic acid epimerase (NCBI ptt file) compare
BT1343 -2.3 -4.1 putative capsule biosynthesis protein (NCBI ptt file) compare
BT3220 -2.3 -8.6 TPR-repeat-containing protein (NCBI ptt file) compare
BT3395 -2.3 -8.4 N-succinylglutamate kinase (EC 2.7.2.-) (from data) compare
BT0351 -2.3 -4.8 L-arabinose isomerase (NCBI ptt file) compare
BT1221 -2.3 -2.7 glucose-6-phosphate 1-dehydrogenase (NCBI ptt file) compare
BT1352 -2.3 -3.1 putative glycosyltransferase HI1698 (NCBI ptt file) compare
BT1530 -2.3 -5.0 putative outer membrane protein OprM precursor (NCBI ptt file) compare
BT2136 -2.3 -5.3 putative purple acid phosphatase (NCBI ptt file) compare
BT3717 -2.2 -5.7 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) compare
BT0617 -2.2 -2.6 Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfB (NCBI ptt file) compare
BT_2008 -2.2 -1.7 hypothetical protein (RefSeq) compare
BT0249 -2.2 -2.1 5-methyltetrahydrofolate--homocysteine methyltransferase or methionine synthase (NCBI ptt file) compare
BT2413 -2.2 -9.5 homoserine O-succinyltransferase (NCBI ptt file) compare
BT2684 -2.2 -2.5 hypothetical protein (NCBI ptt file) compare
BT1358 -2.2 -3.3 putative transcriptional regulator (NCBI ptt file) compare
BT4339 -2.2 -3.8 glutamine synthetase (NCBI ptt file) compare
BT0519 -2.2 -4.9 hypothetical protein (NCBI ptt file) compare
BT1354 -2.1 -5.6 putative flippase (NCBI ptt file) compare
BT3438 -2.1 -4.0 hypothetical protein (NCBI ptt file) compare
BT2091 -2.1 -7.1 methylmalonyl-CoA mutase small subunit (NCBI ptt file) compare
BT2386 -2.1 -7.6 AsnC family transcriptional regulator (NCBI ptt file) compare
BT3342 -2.1 -3.6 hypothetical protein (NCBI ptt file) compare
BT1350 -2.1 -5.4 CDP-glucose 4,6-dehydratase (NCBI ptt file) compare
BT1340 -2.1 -3.7 putative lipopolysaccharide biosynthesis glycosyltransferase (NCBI ptt file) compare
BT4572 -2.0 -7.3 enolase (NCBI ptt file) compare
BT2090 -2.0 -8.5 methylmalonyl-CoA mutase large subunit (NCBI ptt file) compare
BT0122 -2.0 -4.3 3-oxoacyl-[acyl-carrier-protein] synthase III (NCBI ptt file) compare
BT2387 -2.0 -9.9 O-acetylhomoserine (thiol)-lyase (NCBI ptt file) compare
BT0134 -2.0 -2.9 conserved hypothetical protein (NCBI ptt file) compare
BT4265 -2.0 -2.6 GMP synthase (glutamine-hydrolyzing) (NCBI ptt file) compare
BT1351 -2.0 -2.3 glucose-1-phosphate cytidylyltransferase (NCBI ptt file) compare
BT0544 -2.0 -4.9 ammonium transporter (NCBI ptt file) compare
BT1341 -1.9 -4.2 UDP-glucose 6-dehydrogenase (NCBI ptt file) compare
BT3223 -1.9 -2.9 hypothetical protein (NCBI ptt file) compare
BT1857 -1.9 -7.7 3-isopropylmalate dehydrogenase (NCBI ptt file) compare
BT1859 -1.9 -5.2 3-isopropylmalate dehydratase small subunit (NCBI ptt file) compare
BT3549 -1.9 -7.2 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) compare
BT3550 -1.9 -4.8 putative long-chain-fatty-acid--CoA ligase (NCBI ptt file) compare
BT3915 -1.9 -1.8 hypothetical protein (NCBI ptt file) compare
BT1348 -1.9 -2.6 CDP-abequose synthase (NCBI ptt file) compare
BT3268 -1.9 -1.3 glucose-inhibited division protein A (NCBI ptt file) compare
BT2944 -1.9 -5.6 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT1081 -1.9 -2.4 recombination protein recR (NCBI ptt file) compare
BT0173 -1.9 -2.5 conserved hypothetical protein (NCBI ptt file) compare
BT1220 -1.9 -1.3 6-phosphogluconolactonase (NCBI ptt file) compare
BT0356 -1.9 -3.9 aldose 1-epimerase precursor (NCBI ptt file) compare
BT4658 -1.9 -4.4 glucuronyl hydrolase (NCBI ptt file) compare
BT3980 -1.9 -1.7 hypothetical protein (NCBI ptt file) compare
BT0353 -1.9 -4.2 putative sugar epimerase/aldolase (NCBI ptt file) compare
BT0546 -1.8 -3.4 conserved hypothetical protein (NCBI ptt file) compare
BT3260 -1.8 -2.7 DNA polymerase I (NCBI ptt file) compare
BT2153 -1.8 -2.4 putative Fe-S oxidoreductases (NCBI ptt file) compare
BT0350 -1.8 -4.7 ribulokinase (EC 2.7.1.16) (from data) compare
BT0621 -1.8 -2.3 Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfE (NCBI ptt file) compare
BT0730 -1.8 -3.5 putative mRNA-binding protein (NCBI ptt file) compare
BT1439 -1.8 -9.7 Outer membrane binding protein for vancomycin (SusD-like) (from data) compare
BT3195 -1.8 -4.3 conserved hypothetical protein (NCBI ptt file) compare
BT1759 -1.7 -4.2 levanase precursor (2,6-beta-D-fructofuranosidase) (NCBI ptt file) compare
BT2074 -1.7 -6.9 ketol-acid reductoisomerase (NCBI ptt file) compare
BT4667 -1.7 -8.1 beta-galactosidase (NCBI ptt file) compare
BT1952 -1.7 -7.2 Fe3+ ABC transporter, periplasmic iron-binding protein (NCBI ptt file) compare
BT4300 -1.7 -3.7 transcription regulator, CRP family (NCBI ptt file) compare
BT4174 -1.7 -5.7 conserved hypothetical protein (NCBI ptt file) compare
BT2945 -1.7 -6.9 UDP-N-acetyl-D-mannosamine dehydrogenase (NCBI ptt file) compare
BT4305 -1.7 -9.8 putative alpha-amylase (NCBI ptt file) compare
BT3758 -1.7 -3.6 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
BT0882 -1.6 -2.2 conserved hypothetical protein (NCBI ptt file) compare
BT0258 -1.6 -8.8 glucosamine-6-phosphate isomerase (NCBI ptt file) compare
BT3337 -1.6 -8.6 RND efflux system, outer membrane component BipA (from data) compare
BT0177 -1.6 -3.3 hypothetical protein (NCBI ptt file) compare
BT0367 -1.6 -6.3 putative endo-arabinase (NCBI ptt file) compare
BT1515 -1.6 -3.0 conserved hypothetical protein (NCBI ptt file) compare
BT2185 -1.6 -4.4 hypothetical protein (NCBI ptt file) compare
BT0900 -1.6 -1.8 putative tetratricopeptide repeat family protein (NCBI ptt file) compare
BT2062 -1.5 -7.1 6-phosphofructokinase (NCBI ptt file) compare
BT1153 -1.5 -6.4 phosphoserine aminotransferase (NCBI ptt file) compare
BT1169 -1.5 -2.6 hypothetical protein (NCBI ptt file) compare
BT3760 -1.5 -5.2 arginosuccinate synthetase (EC 6.3.4.5) (from data) compare
BT1344 -1.5 -4.8 putative glycosyltransferase (NCBI ptt file) compare
BT1476 -1.5 -4.4 aspartate aminotransferase (NCBI ptt file) compare
BT2899 -1.5 -9.4 hypothetical protein (NCBI ptt file) compare
BT1912 -1.5 -1.5 hypothetical protein (NCBI ptt file) compare
BT2049 -1.5 -2.1 transcriptional regulator (NCBI ptt file) compare
BT4403 -1.5 -3.1 putative anti-sigma factor (NCBI ptt file) compare
BT1739 -1.4 -9.0 excinuclease ABC subunit A (NCBI ptt file) compare
BT3462 -1.4 -4.3 TPR domain protein (NCBI ptt file) compare
BT3973 -1.4 -3.0 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI ptt file) compare
BT2145 -1.4 -8.3 ribonucleoside-diphosphate reductase alpha chain (NCBI ptt file) compare
BT0543 -1.4 -4.6 glutamine synthetase (NCBI ptt file) compare
BT1641 -1.4 -1.8 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT4349 -1.4 -3.0 hypothetical protein (NCBI ptt file) compare
BT2798 -1.4 -9.5 carboxy-terminal processing protease precursor (NCBI ptt file) compare
BT3727 -1.4 -4.6 hypothetical protein (NCBI ptt file) compare
BT2977 -1.4 -8.6 peptidylprolyl isomerase (NCBI ptt file) compare
BT1860 -1.4 -4.6 3-isopropylmalate dehydratase large subunit (NCBI ptt file) compare
BT1363 -1.4 -0.9 DNA Pol III Epsilon Chain (NCBI ptt file) compare
BT1353 -1.4 -0.9 glycosyltransferase (NCBI ptt file) compare
BT2299 -1.4 -2.1 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0570 -1.4 -4.6 excinuclease ABC subunit B (NCBI ptt file) compare
BT1304 -1.4 -1.7 putative transcriptional regulator (NCBI ptt file) compare
BT3348 -1.4 -6.1 unsaturated glucuronide lyase acting on chondroitin/heparin disaccharides (EC 3.2.1.180) (from data) compare
BT3730 -1.4 -1.7 putative regulatory protein (NCBI ptt file) compare
BT3770 -1.4 -1.7 transcriptional regulator (NCBI ptt file) compare
BT1689 -1.3 -2.5 oxaloacetate decarboxylase beta chain (NCBI ptt file) compare
BT4025 -1.3 -1.9 hypothetical protein (NCBI ptt file) compare
BT2467 -1.3 -3.6 hypothetical protein (NCBI ptt file) compare
BT0554 -1.3 -3.8 glucosamine--fructose-6-phosphate aminotransferase (NCBI ptt file) compare
BT1068 -1.3 -2.7 hypothetical protein (NCBI ptt file) compare
BT4043 -1.3 -5.7 dimethyladenosine transferase (NCBI ptt file) compare
BT1168 -1.3 -2.3 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT3759 -1.3 -7.6 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) compare
BT4341 -1.3 -6.0 hypothetical protein (NCBI ptt file) compare
BT0551 -1.3 -6.4 asparagine synthetase B [glutamine-hydrolyzing] (NCBI ptt file) compare
BT4723 -1.3 -2.7 putative anti-sigma factor (NCBI ptt file) compare
BT3819 -1.3 -2.6 conserved hypothetical protein (NCBI ptt file) compare
BT4303 -1.3 -8.4 glycogen debranching enzyme-related protein (4-alpha-glucanotransferase) (NCBI ptt file) compare
BT0572 -1.3 -2.1 conserved hypothetical protein (NCBI ptt file) compare
BT1558 -1.3 -3.6 hypothetical protein (NCBI ptt file) compare
BT2076 -1.3 -5.4 acetohydroxybutanoate synthase regulatory subunit (EC 2.2.1.6) (from data) compare
BT4048 -1.3 -4.3 hypothetical protein (NCBI ptt file) compare
BT0372 -1.3 -3.2 aldose 1-epimerase precursor (NCBI ptt file) compare
BT2146 -1.3 -7.5 4-alpha-glucanotransferase (NCBI ptt file) compare
BT3762 -1.2 -4.7 arginine repressor, transcriptional regulator of arginine metabolism (NCBI ptt file) compare
BT3912 -1.2 -2.8 conserved hypothetical protein (NCBI ptt file) compare
BT0738 -1.2 -3.3 serine hydroxymethyltransferase (NCBI ptt file) compare


Specific Phenotypes

None in this experiment

For Bacteroides thetaiotaomicron VPI-5482 in mouse_post_colonization experiments