Experiment set20IT020 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Post-colonization (Day 6) - Cage1;Mouse3

200 most detrimental genes:

  gene name fitness t score description  
BT0414 +2.3 2.9 sulfate adenylyltransferase subunit 2 (NCBI ptt file) compare
BT1876 +2.2 6.3 putative anti-sigma factor (NCBI ptt file) compare
BT1874 +2.1 7.4 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT2744 +1.9 8.6 acetyltransferase (NCBI ptt file) compare
BT1872 +1.8 4.0 periplasmic beta-glucosidase precursor (NCBI ptt file) compare
BT0844 +1.8 3.4 hypothetical protein (NCBI ptt file) compare
BT3133 +1.6 7.0 alpha-galactosidase (NCBI ptt file) compare
BT2853 +1.6 1.0 hypothetical protein (NCBI ptt file) compare
BT2856 +1.5 4.4 hypothetical protein (NCBI ptt file) compare
BT3691 +1.4 3.6 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT0376 +1.4 2.6 putative transcriptional regulator (NCBI ptt file) compare
BT0409 +1.4 4.7 putative short-chain dehydrogenase (NCBI ptt file) compare
BT0067 +1.3 2.4 hypothetical protein (NCBI ptt file) compare
BT1058 +1.3 8.8 two-component system sensor histidine kinase (NCBI ptt file) compare
BT3690 +1.3 3.5 putative membrane protein (NCBI ptt file) compare
BT2760 +1.3 2.4 conserved hypothetical protein (NCBI ptt file) compare
BT1877 +1.3 3.0 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0498 +1.2 3.3 hypothetical protein (NCBI ptt file) compare
BT1202 +1.2 1.8 UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT1873 +1.2 2.6 endo-arabinase (NCBI ptt file) compare
BT1532 +1.2 6.0 ABC transporter permease (NCBI ptt file) compare
BT2034 +1.1 2.4 two-component system response regulator (NCBI ptt file) compare
BT1656 +1.1 2.7 putative transcriptional regulator (NCBI ptt file) compare
BT0188 +1.1 2.9 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0937 +1.1 2.1 hypothetical protein (NCBI ptt file) compare
BT1849 +1.0 2.5 hypothetical protein (NCBI ptt file) compare
BT0443 +1.0 2.0 thermostable beta-glucosidase B (NCBI ptt file) compare
BT3926 +1.0 3.1 putative peptidase (NCBI ptt file) compare
BT0585 +1.0 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT1071 +1.0 2.1 hypothetical protein (NCBI ptt file) compare
BT0007 +1.0 1.9 hypothetical protein (NCBI ptt file) compare
BT3705 SusR +1.0 7.6 regulatory protein SusR (NCBI ptt file) compare
BT1088 +1.0 2.9 hypothetical protein (NCBI ptt file) compare
BT4249 +1.0 1.8 hypothetical protein (NCBI ptt file) compare
BT2743 +1.0 5.4 putative aminopeptidase (NCBI ptt file) compare
BT3702 SusC +0.9 7.0 SusC, outer membrane protein involved in starch binding (NCBI ptt file) compare
BT2685 +0.9 2.4 hypothetical protein (NCBI ptt file) compare
BT1183 +0.9 5.3 two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) compare
BT0602 +0.9 3.3 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI ptt file) compare
BT0215 +0.9 1.4 iron uptake regulatory protein (NCBI ptt file) compare
BT0063 +0.9 0.9 hypothetical protein (NCBI ptt file) compare
BT3323 +0.9 3.7 hypothetical protein (NCBI ptt file) compare
BT2010 +0.9 0.8 hypothetical protein (NCBI ptt file) compare
BT0462 +0.9 2.1 putative transcriptional regulator (NCBI ptt file) compare
BT1534 +0.9 2.1 hypothetical protein (NCBI ptt file) compare
BT1249 +0.9 3.4 putative multidrug resistance protein (NCBI ptt file) compare
BT0429 +0.8 1.5 indolepyruvate oxidoreductase subunit iorB (NCBI ptt file) compare
BT2854 +0.8 3.4 periplasmic beta-glucosidase precursor (NCBI ptt file) compare
BT3701 SusD +0.8 5.7 SusD, outer membrane protein (NCBI ptt file) compare
BT0479 +0.8 1.9 putative glycosyltransferase (NCBI ptt file) compare
BT0831 +0.8 3.9 ATP-dependent RNA helicase (NCBI ptt file) compare
BT4670 +0.8 4.4 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT0925 +0.8 1.8 ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT2018 +0.8 3.1 conserved hypothetical protein (NCBI ptt file) compare
BT0740 +0.8 1.2 flavoredoxin (NCBI ptt file) compare
BT1875 +0.8 3.9 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT2281 +0.8 2.1 hypothetical protein (NCBI ptt file) compare
BT2027 +0.8 2.1 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT1059 +0.8 4.0 putative UDP-glucose 4-epimerase (NCBI ptt file) compare
BT3703 SusB +0.8 5.2 alpha-glucosidase SusB (NCBI ptt file) compare
p5482_21 +0.8 1.4 hypothetical protein (NCBI) compare
BT3919 +0.8 2.9 putative biopolymer transport protein (NCBI ptt file) compare
BT1229 +0.8 1.3 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT3197 +0.8 1.1 hypothetical protein (NCBI ptt file) compare
BT0945 +0.8 2.5 hypothetical protein (NCBI ptt file) compare
BT0474 +0.7 2.5 D-glycero-D-manno-heptose 1-phosphate kinase (NCBI ptt file) compare
BT2445 +0.7 2.7 hypothetical protein (NCBI ptt file) compare
BT1982 +0.7 1.5 hypothetical protein (NCBI ptt file) compare
BT1529 +0.7 4.0 two-component system response regulator (NCBI ptt file) compare
BT1072 +0.7 2.0 hypothetical protein (NCBI ptt file) compare
BT3755 +0.7 4.5 acetyl-coenzyme A synthetase (NCBI ptt file) compare
BT0877 +0.7 1.6 ferredoxin domain containing protein (NCBI ptt file) compare
BT3700 SusE +0.7 4.1 SusE: Outer membrane amylopectin-binding protein (from data) compare
BT0001 +0.7 3.1 conserved hypothetical protein (NCBI ptt file) compare
BT1329 +0.7 1.9 putative thiol peroxidase (NCBI ptt file) compare
BT0616 +0.7 1.7 conserved hypothetical protein (NCBI ptt file) compare
BT0475 +0.7 1.3 putative phosphoheptose isomerase (NCBI ptt file) compare
BT0902 +0.7 1.3 hypothetical protein (NCBI ptt file) compare
BT3794 +0.7 2.1 hypothetical protein (NCBI ptt file) compare
BT1984 +0.7 1.6 transcriptional regulator (NCBI ptt file) compare
BT0511 +0.7 2.4 hypothetical protein (NCBI ptt file) compare
BT0232 +0.7 2.0 putative protein involved in transposition (NCBI ptt file) compare
BT0752 +0.7 2.0 putative RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT3317 +0.7 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT1126 +0.7 1.1 mobilization protein BmgA (NCBI ptt file) compare
BT4031 +0.7 1.4 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT1185 +0.7 5.9 OmpA-related protein (NCBI ptt file) compare
BT2852 +0.7 3.1 putative beta-xylosidase (NCBI ptt file) compare
BT2604 +0.7 1.9 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1093 +0.7 2.5 conserved hypothetical protein, putative TonB-dependent outer membrane receptor protein (NCBI ptt file) compare
BT0934 +0.7 1.6 hypothetical protein (NCBI ptt file) compare
BT1948 +0.7 1.4 hypothetical protein (NCBI ptt file) compare
BT1200 +0.7 2.0 hypothetical protein (NCBI ptt file) compare
BT1556 +0.7 1.6 hypothetical protein (NCBI ptt file) compare
BT2282 +0.6 2.5 conserved hypothetical protein (NCBI ptt file) compare
BT0185 +0.6 0.9 conserved hypothetical protein (NCBI ptt file) compare
BT2035 +0.6 2.8 putative ABC transporter ATP-binding protein (NCBI ptt file) compare
BT0378 +0.6 1.6 capsular polysaccharide biosynthesis protein capD (NCBI ptt file) compare
BT1084 +0.6 1.5 hypothetical protein (NCBI ptt file) compare
BT4123 +0.6 4.4 exo-poly-alpha-D-galacturonosidase precursor (NCBI ptt file) compare
BT1437 +0.6 2.6 conserved hypothetical protein (NCBI ptt file) compare
BT1219 +0.6 3.7 conserved hypothetical protein (NCBI ptt file) compare
BT0697 +0.6 0.8 putative phosphatase/phosphohexomutase (NCBI ptt file) compare
BT1817 +0.6 2.0 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT4673 +0.6 4.6 two-component system sensor histidine kinase (NCBI ptt file) compare
BT2407 +0.6 2.5 NAD-utilizing dehydrogenases (NCBI ptt file) compare
BT3044 +0.6 4.0 hypothetical protein (NCBI ptt file) compare
BT1946 +0.6 1.5 hypothetical protein (NCBI ptt file) compare
BT2610 +0.6 2.1 hypothetical protein (NCBI ptt file) compare
BT2302 +0.6 0.8 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1203 +0.6 1.6 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT0175 +0.6 1.0 conserved hypothetical protein (NCBI ptt file) compare
BT4380 +0.6 1.5 conserved hypothetical protein (NCBI ptt file) compare
BT2283 +0.6 0.9 hypothetical protein (NCBI ptt file) compare
BT1469 +0.6 2.8 two-component system response regulator (NCBI ptt file) compare
BT1069 +0.6 2.0 conserved hypothetical protein, putative transcriptional regulator (NCBI ptt file) compare
BT1567 +0.6 1.5 conserved hypothetical protein (NCBI ptt file) compare
BT2857 +0.6 2.3 hypothetical protein (NCBI ptt file) compare
BT0167 +0.6 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT1466 +0.6 1.4 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT1470 +0.6 1.5 putative two-component system sensor histidine kinase (NCBI ptt file) compare
BT3908 +0.6 2.6 conserved hypothetical protein (NCBI ptt file) compare
BT3832 +0.6 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT0846 +0.6 1.8 hypothetical protein (NCBI ptt file) compare
BT4384 +0.6 2.0 hypothetical protein (NCBI ptt file) compare
BT0793 +0.6 1.9 xylose isomerase (NCBI ptt file) compare
BT3839 +0.6 1.0 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT1111 +0.6 1.8 hypothetical protein (NCBI ptt file) compare
p5482_04 +0.6 3.7 hypothetical protein (NCBI) compare
BT1544 +0.6 1.8 NADH pyrophosphatase, MutT family hydrolase (NCBI ptt file) compare
BT2294 +0.6 1.2 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT3318 +0.6 2.6 signal peptidase I (NCBI ptt file) compare
BT1388 +0.6 1.5 integral membrane protein (NCBI ptt file) compare
BT1885 +0.6 2.4 putative ATP-dependent RNA helicase (NCBI ptt file) compare
BT3326 +0.6 2.2 putative nifR3 family TIM-barrel enzyme with dihydrouridine synthase domain (NCBI ptt file) compare
BT3022 +0.6 1.1 hypothetical protein (NCBI ptt file) compare
BT3770 +0.5 1.1 transcriptional regulator (NCBI ptt file) compare
BT0531 +0.5 1.0 anthranilate synthase component II (NCBI ptt file) compare
BT1213 +0.5 2.0 periplasmic component of efflux system (NCBI ptt file) compare
BT0878 +0.5 1.1 ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT2121 +0.5 3.3 putative Na+-driven multidrug efflux pump (NCBI ptt file) compare
BT0830 +0.5 2.9 hypothetical protein (NCBI ptt file) compare
BT2858 +0.5 3.0 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT2315 +0.5 1.9 hypothetical protein (NCBI ptt file) compare
BT4003 +0.5 1.4 stationary-phase survival protein SurE (NCBI ptt file) compare
BT4693 +0.5 1.2 cation efflux system protein (NCBI ptt file) compare
BT0106 +0.5 1.0 conserved hypothetical protein (NCBI ptt file) compare
BT2311 +0.5 2.5 conserved hypothetical protein (NCBI ptt file) compare
BT1867 +0.5 1.4 hypothetical protein (NCBI ptt file) compare
BT0415 +0.5 2.1 sulfate adenylyltransferase subunit 1/adenylylsulfate kinase (NCBI ptt file) compare
BT2855 +0.5 3.7 beta-mannosidase precursor (NCBI ptt file) compare
BT2304 +0.5 2.0 hypothetical protein (NCBI ptt file) compare
BT1513 +0.5 2.4 integrase (NCBI ptt file) compare
BT2312 +0.5 2.1 hypothetical protein (NCBI ptt file) compare
BT2208 +0.5 1.8 hypothetical protein (NCBI ptt file) compare
BT0777 +0.5 1.0 hypothetical protein (NCBI ptt file) compare
BT0991 +0.5 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT1737 +0.5 3.2 conserved hypothetical protein, putative secreted protein (NCBI ptt file) compare
BT4749 +0.5 3.0 putative DNA methylase (NCBI ptt file) compare
BT2116 +0.5 1.2 conserved hypothetical protein (NCBI ptt file) compare
BT3720 +0.5 2.6 putative aspartate aminotransferase (NCBI ptt file) compare
BT1161 +0.5 1.8 putative aminopeptidase C (NCBI ptt file) compare
BT0820 +0.5 1.2 conserved hypothetical protein (NCBI ptt file) compare
BT0098 +0.5 0.8 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT2309 +0.5 1.3 hypothetical protein (NCBI ptt file) compare
BT0494 +0.5 2.6 protoporphyrin IX magnesium chelatase (NCBI ptt file) compare
BT0646 +0.5 2.2 hypothetical protein (NCBI ptt file) compare
BT2612 +0.5 1.3 hypothetical protein (NCBI ptt file) compare
BT1187 +0.5 1.7 transcriptional regulator (NCBI ptt file) compare
BT3896 +0.5 2.2 TonB (NCBI ptt file) compare
BT1080 +0.5 0.9 hypothetical protein (NCBI ptt file) compare
BT2044 +0.5 2.2 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT4033 +0.5 1.2 hypothetical protein (NCBI ptt file) compare
BT1107 +0.5 1.4 ferritin A (NCBI ptt file) compare
BT1736 +0.5 1.4 chromate transport protein (NCBI ptt file) compare
BT4469 +0.5 1.2 conserved hypothetical protein (NCBI ptt file) compare
BT2366 +0.5 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT4774 +0.5 1.0 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT2318 +0.5 1.8 hypothetical protein (NCBI ptt file) compare
BT4250 +0.5 2.3 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0015 +0.5 1.2 rteB, two-component system response regulator (NCBI ptt file) compare
BT1016 +0.5 2.0 conserved protein with a conserved patatin-like phospholipase domain (NCBI ptt file) compare
BT2593 +0.5 1.8 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT2388 +0.5 2.3 hypothetical protein (NCBI ptt file) compare
BT1308 +0.5 2.1 clostripain-related protein (NCBI ptt file) compare
BT0418 +0.5 1.0 outer membrane porin F precursor (NCBI ptt file) compare
BT3799 +0.5 2.8 putative sulfatase yidJ (NCBI ptt file) compare
BT1112 +0.5 0.9 transposase (NCBI ptt file) compare
BT2596 +0.5 2.5 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT2335 +0.5 2.1 integrase protein (NCBI ptt file) compare
BT1148 +0.5 1.4 putative NADH dehydrogenase/NAD(P)H nitroreductase (NCBI ptt file) compare
BT4002 +0.5 0.6 ATPase, ParA family (NCBI ptt file) compare
BT0779 +0.5 1.4 hypothetical protein (NCBI ptt file) compare
BT1449 +0.5 2.0 biotin carboxylase (NCBI ptt file) compare
BT2929 +0.5 1.1 putative non-specific DNA-binding protein (NCBI ptt file) compare
p5482_36 +0.5 2.8 hypothetical protein (NCBI) compare
BT0472 +0.5 1.4 putative acyltransferase in colanic acid biosynthesis (NCBI ptt file) compare
BT2962 +0.5 2.5 hypothetical protein (NCBI ptt file) compare
BT3250 +0.5 2.8 conserved hypothetical protein (NCBI ptt file) compare
BT1832 +0.5 2.1 conserved hypothetical protein (NCBI ptt file) compare


Specific Phenotypes

None in this experiment

For Bacteroides thetaiotaomicron VPI-5482 in mouse_post_colonization experiments