Experiment set1S93 for Enterobacter sp. TBS_079

Compare to:

Outgrowth from agar plate co-culture with Enterobacter sp. TBS_079

200 most important genes:

  gene name fitness t score description  
MPMX20_01367 -6.0 -4.1 Tol-Pal system protein TolR compare
MPMX20_01950 -5.6 -3.9 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_04768 -5.4 -24.2 hypothetical protein compare
MPMX20_01368 -4.9 -5.8 hypothetical protein compare
MPMX20_04443 -4.5 -3.1 Sec-independent protein translocase protein TatB compare
MPMX20_02591 -4.4 -6.8 DNA-binding protein H-NS compare
MPMX20_01366 -4.3 -5.9 Tol-Pal system protein TolQ compare
MPMX20_00453 -4.3 -2.9 RNA-binding protein Hfq compare
MPMX20_01355 -4.2 -1.5 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_01370 -3.8 -5.3 Peptidoglycan-associated lipoprotein compare
MPMX20_00749 -3.5 -7.8 Chaperone SurA compare
MPMX20_01369 -3.4 -10.4 Tol-Pal system protein TolB compare
MPMX20_01901 -3.3 -3.4 Integration host factor subunit alpha compare
MPMX20_02574 -3.1 -2.1 putative intracellular septation protein A compare
MPMX20_03018 -3.0 -3.6 hypothetical protein compare
MPMX20_01570 -3.0 -3.3 Integration host factor subunit beta compare
MPMX20_00807 -3.0 -3.5 Pyruvate dehydrogenase E1 component compare
MPMX20_03390 -2.9 -9.5 Outer membrane protein assembly factor BamB compare
MPMX20_04642 -2.9 -2.0 Phosphate import ATP-binding protein PstB compare
MPMX20_00745 -2.9 -5.5 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_04530 -2.9 -11.2 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_04442 -2.9 -6.1 Sec-independent protein translocase protein TatC compare
MPMX20_03010 -2.9 -2.8 UDP-glucose 4-epimerase compare
MPMX20_04440 -2.9 -1.9 Transcription antitermination protein RfaH compare
MPMX20_03021 -2.8 -7.6 hypothetical protein compare
MPMX20_01334 -2.7 -8.9 Phosphoglucomutase compare
MPMX20_03986 -2.6 -3.2 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_04444 -2.5 -1.5 Sec-independent protein translocase protein TatA compare
MPMX20_00106 -2.5 -2.9 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_03309 -2.5 -3.3 Phosphocarrier protein HPr compare
MPMX20_04595 -2.5 -1.7 Glutamine synthetase compare
MPMX20_04641 -2.4 -2.8 Phosphate transport system permease protein PstA compare
MPMX20_04483 -2.4 -1.7 Lipid III flippase compare
MPMX20_02767 -2.4 -3.0 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_02701 -2.4 -2.9 Fatty acid metabolism regulator protein compare
MPMX20_04640 -2.4 -4.2 Phosphate transport system permease protein PstC compare
MPMX20_03019 -2.3 -12.8 hypothetical protein compare
MPMX20_04278 -2.3 -5.4 3-dehydroquinate synthase compare
MPMX20_02766 -2.3 -4.3 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_04119 -2.2 -2.6 DNA polymerase III subunit chi compare
MPMX20_04463 -2.2 -6.8 DNA helicase II compare
MPMX20_04626 -2.2 -2.6 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_01768 -2.2 -3.2 Large ribosomal RNA subunit accumulation protein YceD compare
MPMX20_01972 -2.2 -1.6 tRNA-Val compare
MPMX20_01552 -2.2 -5.1 hypothetical protein compare
MPMX20_01354 -2.1 -2.2 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_01030 -2.1 -7.5 Lon protease compare
MPMX20_04639 -2.1 -1.6 Phosphate-binding protein PstS compare
MPMX20_00109 -2.1 -13.3 hypothetical protein compare
MPMX20_00720 -2.1 -1.8 Chaperone protein DnaK compare
MPMX20_04197 -2.1 -4.8 Trk system potassium uptake protein TrkA compare
MPMX20_00812 -2.1 -7.1 Aconitate hydratase B compare
MPMX20_04489 -2.1 -12.9 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_00747 -2.1 -4.7 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_03685 -2.0 -3.4 RecBCD enzyme subunit RecC compare
MPMX20_03683 -2.0 -1.4 RecBCD enzyme subunit RecB compare
MPMX20_03408 -2.0 -2.5 Co-chaperone protein HscB compare
MPMX20_04532 -2.0 -2.2 Met repressor compare
MPMX20_04137 -2.0 -3.9 Inner membrane protein YhcB compare
MPMX20_02929 -2.0 -2.2 hypothetical protein compare
MPMX20_04650 -2.0 -3.5 tRNA modification GTPase MnmE compare
MPMX20_00721 -2.0 -3.3 Chaperone protein DnaJ compare
MPMX20_03022 -2.0 -1.4 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_04140 -2.0 -6.7 Malate dehydrogenase compare
MPMX20_03211 -2.0 -5.0 NADH-quinone oxidoreductase subunit I compare
MPMX20_00108 -1.9 -13.0 hypothetical protein compare
MPMX20_03020 -1.9 -5.5 hypothetical protein compare
MPMX20_00110 -1.9 -11.6 hypothetical protein compare
MPMX20_04469 -1.9 -3.3 Adenylate cyclase compare
MPMX20_02896 -1.9 -12.1 Lysozyme RrrD compare
MPMX20_04038 -1.9 -4.5 Glucitol operon repressor compare
MPMX20_04465 -1.8 -4.8 Tyrosine recombinase XerC compare
MPMX20_02869 -1.8 -13.5 hypothetical protein compare
MPMX20_01029 -1.8 -3.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_01352 -1.7 -5.7 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_01382 -1.7 -3.0 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_04170 -1.7 -2.1 DNA-binding protein Fis compare
MPMX20_03490 -1.7 -4.4 SsrA-binding protein compare
MPMX20_03308 -1.7 -5.6 Cysteine synthase A compare
MPMX20_02768 -1.6 -2.2 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_01028 -1.6 -1.9 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_03264 -1.6 -4.4 Chorismate synthase compare
MPMX20_03440 -1.6 -3.6 Elongation factor 4 compare
MPMX20_03407 -1.6 -2.4 Chaperone protein HscA compare
MPMX20_04518 -1.6 -5.1 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_00480 -1.6 -2.2 50S ribosomal protein L9 compare
MPMX20_04309 -1.6 -5.2 Aerobic glycerol-3-phosphate dehydrogenase compare
MPMX20_00105 -1.6 -8.8 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_02576 -1.6 -2.6 Protein TonB compare
MPMX20_03012 -1.6 -8.1 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_04301 -1.6 -2.0 Fe/S biogenesis protein NfuA compare
MPMX20_01286 -1.6 -1.3 Sec-independent protein translocase protein TatE compare
MPMX20_03753 -1.6 -4.5 Tyrosine recombinase XerD compare
MPMX20_03409 -1.6 -2.1 Iron-binding protein IscA compare
MPMX20_03217 -1.6 -3.6 NADH-quinone oxidoreductase subunit B compare
MPMX20_04110 -1.6 -3.5 Nitrogen regulatory protein compare
MPMX20_02864 -1.5 -4.6 hypothetical protein compare
MPMX20_00102 -1.5 -1.5 hypothetical protein compare
MPMX20_01156 -1.5 -2.8 hypothetical protein compare
MPMX20_02887 -1.5 -3.6 hypothetical protein compare
MPMX20_02919 -1.5 -5.6 hypothetical protein compare
MPMX20_00086 -1.5 -3.3 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_02879 -1.5 -2.8 hypothetical protein compare
MPMX20_02997 -1.5 -6.0 Exodeoxyribonuclease I compare
MPMX20_00570 -1.5 -8.5 putative BsuMI modification methylase subunit YdiO compare
MPMX20_03580 -1.5 -4.2 Protein RecA compare
MPMX20_02892 -1.5 -7.7 hypothetical protein compare
MPMX20_00899 -1.4 -1.5 Ribonuclease HI compare
MPMX20_01351 -1.4 -2.7 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_03017 -1.4 -6.7 hypothetical protein compare
MPMX20_03767 -1.4 -3.7 Xaa-Pro aminopeptidase compare
MPMX20_02872 -1.4 -4.1 hypothetical protein compare
MPMX20_01350 -1.4 -3.5 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_03851 -1.4 -5.7 Biopolymer transport protein ExbB compare
MPMX20_01356 -1.4 -6.3 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_04272 -1.3 -1.3 hypothetical protein compare
MPMX20_04374 -1.3 -2.6 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_02920 -1.3 -5.0 hypothetical protein compare
MPMX20_00136 -1.3 -1.1 hypothetical protein compare
MPMX20_02861 -1.3 -8.2 hypothetical protein compare
MPMX20_02918 -1.3 -5.0 hypothetical protein compare
MPMX20_01765 -1.3 -2.8 Ribonuclease E compare
MPMX20_02203 -1.3 -2.2 hypothetical protein compare
MPMX20_02102 -1.3 -1.2 hypothetical protein compare
MPMX20_02888 -1.3 -5.7 hypothetical protein compare
MPMX20_03498 -1.3 -2.0 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_04253 -1.3 -0.7 Malonate decarboxylase acyl carrier protein compare
MPMX20_03208 -1.3 -4.0 NADH-quinone oxidoreductase subunit L compare
MPMX20_00133 -1.3 -4.5 Mannitol operon repressor compare
MPMX20_02645 -1.2 -5.0 Ribosome-binding ATPase YchF compare
MPMX20_02894 -1.2 -2.9 hypothetical protein compare
MPMX20_03285 -1.2 -1.2 hypothetical protein compare
MPMX20_00441 -1.2 -0.8 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_01357 -1.2 -4.7 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_02757 -1.2 -2.1 Glucose-6-phosphate 1-dehydrogenase compare
MPMX20_02478 -1.2 -4.1 Putrescine export system ATP-binding protein SapF compare
MPMX20_00388 -1.2 -0.8 hypothetical protein compare
MPMX20_02886 -1.2 -8.2 hypothetical protein compare
MPMX20_02901 -1.2 -7.1 hypothetical protein compare
MPMX20_03206 -1.2 -5.8 NADH-quinone oxidoreductase subunit N compare
MPMX20_01607 -1.2 -3.2 Outer membrane protein A compare
MPMX20_02732 -1.2 -2.1 PhoP/PhoQ regulator MgrB compare
MPMX20_02875 -1.2 -7.0 hypothetical protein compare
MPMX20_02891 -1.2 -7.0 hypothetical protein compare
MPMX20_02826 -1.2 -1.5 Cold shock-like protein CspB compare
MPMX20_02881 -1.2 -2.0 hypothetical protein compare
MPMX20_02863 -1.2 -8.3 hypothetical protein compare
MPMX20_03013 -1.2 -5.7 dTDP-glucose 4,6-dehydratase compare
MPMX20_02882 -1.2 -5.6 hypothetical protein compare
MPMX20_02880 -1.2 -8.4 hypothetical protein compare
MPMX20_04393 -1.2 -3.6 Low-affinity inorganic phosphate transporter 1 compare
MPMX20_01969 -1.2 -2.9 Carbonic anhydrase 1 compare
MPMX20_02635 -1.2 -1.7 Release factor glutamine methyltransferase compare
MPMX20_02916 -1.1 -3.3 hypothetical protein compare
MPMX20_02898 -1.1 -6.4 hypothetical protein compare
MPMX20_02862 -1.1 -7.2 hypothetical protein compare
MPMX20_02885 -1.1 -6.4 hypothetical protein compare
MPMX20_02890 -1.1 -7.1 hypothetical protein compare
MPMX20_02884 -1.1 -6.6 hypothetical protein compare
MPMX20_02309 -1.1 -3.1 hypothetical protein compare
MPMX20_02883 -1.1 -5.9 hypothetical protein compare
MPMX20_02860 -1.1 -6.5 hypothetical protein compare
MPMX20_00107 -1.1 -3.8 Lipopolysaccharide core heptosyltransferase RfaQ compare
MPMX20_02866 -1.1 -7.5 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase compare
MPMX20_02895 -1.1 -4.8 hypothetical protein compare
MPMX20_02546 -1.1 -2.2 hypothetical protein compare
MPMX20_02870 -1.1 -8.1 hypothetical protein compare
MPMX20_04730 -1.1 -3.4 hypothetical protein compare
MPMX20_01181 -1.1 -2.5 Putative transferase YhbX compare
MPMX20_02737 -1.1 -6.7 Tail-specific protease compare
MPMX20_02915 -1.1 -6.0 hypothetical protein compare
MPMX20_02475 -1.1 -2.9 Putrescine export system permease protein SapB compare
MPMX20_03447 -1.1 -4.3 ATP-dependent RNA helicase SrmB compare
MPMX20_00419 -1.1 -6.4 Aspartate ammonia-lyase compare
MPMX20_03338 -1.0 -2.5 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_02878 -1.0 -4.7 hypothetical protein compare
MPMX20_02772 -1.0 -3.1 Isochorismatase family protein YecD compare
MPMX20_04670 -1.0 -1.1 hypothetical protein compare
MPMX20_02825 -1.0 -2.0 Cold shock-like protein CspB compare
MPMX20_02710 -1.0 -4.6 Ribonuclease D compare
MPMX20_03946 -1.0 -2.6 hypothetical protein compare
MPMX20_04731 -1.0 -4.2 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_02116 -1.0 -1.5 hypothetical protein compare
MPMX20_00775 -1.0 -2.3 Ribosomal RNA small subunit methyltransferase H compare
MPMX20_03207 -1.0 -3.6 NADH-quinone oxidoreductase subunit M compare
MPMX20_01019 -1.0 -3.9 Protoheme IX farnesyltransferase compare
MPMX20_03216 -1.0 -5.1 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_02871 -1.0 -5.2 hypothetical protein compare
MPMX20_02905 -1.0 -5.2 hypothetical protein compare
MPMX20_02907 -1.0 -4.6 hypothetical protein compare
MPMX20_04009 -1.0 -1.7 hypothetical protein compare
MPMX20_02903 -0.9 -2.5 hypothetical protein compare
MPMX20_04601 -0.9 -1.1 DNA polymerase I compare
MPMX20_03382 -0.9 -0.6 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_03479 -0.9 -1.7 30S ribosomal protein S16 compare
MPMX20_01942 -0.9 -3.5 HTH-type transcriptional repressor BluR compare
MPMX20_04141 -0.9 -3.1 Arginine repressor compare
MPMX20_02877 -0.9 -3.6 hypothetical protein compare
MPMX20_00087 -0.9 -1.5 DNA-directed RNA polymerase subunit omega compare
MPMX20_03487 -0.9 -3.4 Outer membrane protein assembly factor BamE compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in mixed community experiments

For mixed community Mixed culture; Enterobacter sp. TBS_079 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=outgrowth_in_LB_with_kan50 across organisms