Experiment set1S89 for Enterobacter sp. TBS_079

Compare to:

Outgrowth from agar plate co-culture with Achromobacter sp. TBS_048

200 most important genes:

  gene name fitness t score description  
MPMX20_04768 -5.5 -25.2 hypothetical protein compare
MPMX20_01368 -5.2 -6.1 hypothetical protein compare
MPMX20_01901 -5.1 -3.4 Integration host factor subunit alpha compare
MPMX20_01950 -4.8 -5.7 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_00453 -4.7 -3.2 RNA-binding protein Hfq compare
MPMX20_01370 -4.3 -4.5 Peptidoglycan-associated lipoprotein compare
MPMX20_03408 -4.0 -2.7 Co-chaperone protein HscB compare
MPMX20_04444 -4.0 -1.7 Sec-independent protein translocase protein TatA compare
MPMX20_04442 -4.0 -6.6 Sec-independent protein translocase protein TatC compare
MPMX20_01286 -3.9 -2.8 Sec-independent protein translocase protein TatE compare
MPMX20_01366 -3.8 -5.4 Tol-Pal system protein TolQ compare
MPMX20_02591 -3.8 -6.5 DNA-binding protein H-NS compare
MPMX20_01367 -3.7 -7.5 Tol-Pal system protein TolR compare
MPMX20_03390 -3.7 -9.7 Outer membrane protein assembly factor BamB compare
MPMX20_03018 -3.6 -4.3 hypothetical protein compare
MPMX20_03021 -3.6 -8.0 hypothetical protein compare
MPMX20_01984 -3.5 -3.2 Ribonuclease T compare
MPMX20_00749 -3.5 -5.7 Chaperone SurA compare
MPMX20_01369 -3.3 -9.1 Tol-Pal system protein TolB compare
MPMX20_01029 -3.3 -3.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_04642 -3.3 -2.3 Phosphate import ATP-binding protein PstB compare
MPMX20_01020 -3.3 -1.9 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
MPMX20_04440 -3.2 -1.9 Transcription antitermination protein RfaH compare
MPMX20_01552 -3.2 -5.3 hypothetical protein compare
MPMX20_04119 -3.2 -3.1 DNA polymerase III subunit chi compare
MPMX20_04275 -3.2 -3.1 Ribulose-phosphate 3-epimerase compare
MPMX20_02701 -3.0 -3.0 Fatty acid metabolism regulator protein compare
MPMX20_04532 -3.0 -2.1 Met repressor compare
MPMX20_01550 -2.9 -3.0 Thioredoxin reductase compare
MPMX20_04595 -2.9 -1.9 Glutamine synthetase compare
MPMX20_02767 -2.9 -3.5 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_00106 -2.8 -3.9 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_03685 -2.8 -2.7 RecBCD enzyme subunit RecC compare
MPMX20_04650 -2.8 -4.3 tRNA modification GTPase MnmE compare
MPMX20_04483 -2.8 -1.9 Lipid III flippase compare
MPMX20_03308 -2.8 -8.6 Cysteine synthase A compare
MPMX20_03010 -2.7 -5.7 UDP-glucose 4-epimerase compare
MPMX20_04639 -2.7 -1.9 Phosphate-binding protein PstS compare
MPMX20_02574 -2.6 -3.1 putative intracellular septation protein A compare
MPMX20_00899 -2.6 -2.7 Ribonuclease HI compare
MPMX20_01030 -2.6 -8.8 Lon protease compare
MPMX20_01028 -2.6 -1.8 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_03019 -2.6 -14.9 hypothetical protein compare
MPMX20_00807 -2.6 -6.0 Pyruvate dehydrogenase E1 component compare
MPMX20_00110 -2.5 -14.9 hypothetical protein compare
MPMX20_03440 -2.5 -6.4 Elongation factor 4 compare
MPMX20_02766 -2.5 -4.3 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_00109 -2.5 -15.5 hypothetical protein compare
MPMX20_02576 -2.5 -4.7 Protein TonB compare
MPMX20_03683 -2.4 -1.6 RecBCD enzyme subunit RecB compare
MPMX20_04301 -2.4 -3.6 Fe/S biogenesis protein NfuA compare
MPMX20_01607 -2.4 -4.9 Outer membrane protein A compare
MPMX20_00105 -2.4 -9.4 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_03022 -2.3 -1.6 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_04530 -2.3 -8.9 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_04443 -2.2 -2.4 Sec-independent protein translocase protein TatB compare
MPMX20_03409 -2.2 -2.2 Iron-binding protein IscA compare
MPMX20_04489 -2.2 -11.9 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_03986 -2.2 -1.9 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_04465 -2.2 -5.2 Tyrosine recombinase XerC compare
MPMX20_00108 -2.1 -13.7 hypothetical protein compare
MPMX20_04518 -2.1 -6.2 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_04469 -2.1 -4.3 Adenylate cyclase compare
MPMX20_01972 -2.1 -1.5 tRNA-Val compare
MPMX20_01334 -2.0 -7.3 Phosphoglucomutase compare
MPMX20_03407 -2.0 -3.8 Chaperone protein HscA compare
MPMX20_01351 -2.0 -3.1 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_02476 -2.0 -2.5 Putrescine export system permease protein SapC compare
MPMX20_00093 -1.9 -6.9 Orotate phosphoribosyltransferase compare
MPMX20_03017 -1.9 -6.6 hypothetical protein compare
MPMX20_02535 -1.9 -3.1 Pyrimidine-specific ribonucleoside hydrolase RihB compare
MPMX20_02869 -1.9 -14.0 hypothetical protein compare
MPMX20_00102 -1.9 -1.8 hypothetical protein compare
MPMX20_04140 -1.8 -6.3 Malate dehydrogenase compare
MPMX20_03386 -1.8 -1.2 putative protein YfgJ compare
MPMX20_04375 -1.8 -5.5 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_01549 -1.8 -3.3 ATP-binding/permease protein CydD compare
MPMX20_02919 -1.8 -6.9 hypothetical protein compare
MPMX20_00197 -1.7 -2.1 tRNA-Tyr compare
MPMX20_02896 -1.7 -11.4 Lysozyme RrrD compare
MPMX20_01354 -1.7 -2.7 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_00452 -1.7 -7.1 tRNA dimethylallyltransferase compare
MPMX20_01333 -1.7 -4.7 Negative modulator of initiation of replication compare
MPMX20_03443 -1.7 -3.4 Anti-sigma-E factor RseA compare
MPMX20_00747 -1.6 -3.4 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_04162 -1.6 -3.8 3-dehydroquinate dehydratase compare
MPMX20_02475 -1.6 -4.0 Putrescine export system permease protein SapB compare
MPMX20_03206 -1.6 -6.1 NADH-quinone oxidoreductase subunit N compare
MPMX20_02672 -1.6 -11.7 hypothetical protein compare
MPMX20_00812 -1.6 -5.4 Aconitate hydratase B compare
MPMX20_03015 -1.6 -11.8 Phosphoglucosamine mutase compare
MPMX20_01356 -1.6 -5.7 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_02732 -1.6 -2.3 PhoP/PhoQ regulator MgrB compare
MPMX20_01349 -1.6 -4.0 Citrate synthase compare
MPMX20_04640 -1.6 -2.4 Phosphate transport system permease protein PstC compare
MPMX20_03016 -1.6 -11.3 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_01350 -1.6 -3.0 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_02885 -1.6 -6.7 hypothetical protein compare
MPMX20_02920 -1.6 -5.7 hypothetical protein compare
MPMX20_02887 -1.5 -4.0 hypothetical protein compare
MPMX20_03163 -1.5 -2.1 hypothetical protein compare
MPMX20_02825 -1.5 -2.9 Cold shock-like protein CspB compare
MPMX20_03036 -1.5 -4.7 Putative acetyltransferase compare
MPMX20_03211 -1.5 -2.7 NADH-quinone oxidoreductase subunit I compare
MPMX20_03226 -1.5 -3.0 Acetate kinase compare
MPMX20_02768 -1.5 -2.0 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_02895 -1.5 -7.4 hypothetical protein compare
MPMX20_01768 -1.5 -2.1 Large ribosomal RNA subunit accumulation protein YceD compare
MPMX20_04463 -1.5 -4.4 DNA helicase II compare
MPMX20_02872 -1.4 -4.9 hypothetical protein compare
MPMX20_01135 -1.4 -5.2 HTH-type transcriptional regulator BetI compare
MPMX20_02494 -1.4 -3.5 Orotidine 5'-phosphate decarboxylase compare
MPMX20_02871 -1.4 -5.8 hypothetical protein compare
MPMX20_01382 -1.4 -2.3 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_03020 -1.4 -4.7 hypothetical protein compare
MPMX20_02918 -1.4 -4.4 hypothetical protein compare
MPMX20_00570 -1.4 -8.5 putative BsuMI modification methylase subunit YdiO compare
MPMX20_04626 -1.4 -3.2 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_02696 -1.4 -4.8 Murein tetrapeptide carboxypeptidase compare
MPMX20_02890 -1.4 -7.0 hypothetical protein compare
MPMX20_04393 -1.4 -4.8 Low-affinity inorganic phosphate transporter 1 compare
MPMX20_04197 -1.4 -4.5 Trk system potassium uptake protein TrkA compare
MPMX20_03742 -1.4 -6.4 HTH-type transcriptional regulator GalR compare
MPMX20_03487 -1.4 -4.2 Outer membrane protein assembly factor BamE compare
MPMX20_02898 -1.4 -6.0 hypothetical protein compare
MPMX20_03490 -1.4 -3.6 SsrA-binding protein compare
MPMX20_02882 -1.4 -6.6 hypothetical protein compare
MPMX20_00107 -1.4 -4.5 Lipopolysaccharide core heptosyltransferase RfaQ compare
MPMX20_03753 -1.3 -4.0 Tyrosine recombinase XerD compare
MPMX20_02888 -1.3 -6.8 hypothetical protein compare
MPMX20_02116 -1.3 -1.4 hypothetical protein compare
MPMX20_02305 -1.3 -2.0 hypothetical protein compare
MPMX20_01357 -1.3 -4.3 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_02477 -1.3 -3.6 Peptide transport system ATP-binding protein SapD compare
MPMX20_01969 -1.3 -2.7 Carbonic anhydrase 1 compare
MPMX20_03310 -1.3 -2.6 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_03338 -1.3 -2.9 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_00722 -1.3 -4.3 Na(+)/H(+) antiporter NhaA compare
MPMX20_04141 -1.3 -3.6 Arginine repressor compare
MPMX20_03210 -1.3 -3.3 NADH-quinone oxidoreductase subunit J compare
MPMX20_02635 -1.3 -1.5 Release factor glutamine methyltransferase compare
MPMX20_03479 -1.3 -1.1 30S ribosomal protein S16 compare
MPMX20_03851 -1.3 -5.5 Biopolymer transport protein ExbB compare
MPMX20_03213 -1.3 -5.2 NADH-quinone oxidoreductase subunit G compare
MPMX20_03012 -1.3 -5.8 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_01352 -1.3 -5.8 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_03756 -1.3 -3.0 FAD assembly factor SdhE compare
MPMX20_03047 -1.3 -3.2 dCTP deaminase compare
MPMX20_02908 -1.3 -6.4 hypothetical protein compare
MPMX20_03686 -1.3 -1.5 hypothetical protein compare
MPMX20_03767 -1.2 -3.6 Xaa-Pro aminopeptidase compare
MPMX20_02877 -1.2 -5.9 hypothetical protein compare
MPMX20_04731 -1.2 -5.7 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_02907 -1.2 -5.9 hypothetical protein compare
MPMX20_03216 -1.2 -6.5 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_03013 -1.2 -5.8 dTDP-glucose 4,6-dehydratase compare
MPMX20_02863 -1.2 -8.4 hypothetical protein compare
MPMX20_03882 -1.2 -4.7 Outer membrane protein TolC compare
MPMX20_03850 -1.2 -2.1 Biopolymer transport protein ExbD compare
MPMX20_02884 -1.2 -7.6 hypothetical protein compare
MPMX20_01353 -1.2 -3.0 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_02862 -1.2 -7.2 hypothetical protein compare
MPMX20_02997 -1.2 -5.7 Exodeoxyribonuclease I compare
MPMX20_02864 -1.2 -3.4 hypothetical protein compare
MPMX20_02870 -1.2 -8.7 hypothetical protein compare
MPMX20_02881 -1.2 -1.9 hypothetical protein compare
MPMX20_02924 -1.1 -7.0 hypothetical protein compare
MPMX20_01734 -1.1 -4.3 Lipid A biosynthesis lauroyltransferase compare
MPMX20_04601 -1.1 -1.3 DNA polymerase I compare
MPMX20_00721 -1.1 -2.2 Chaperone protein DnaJ compare
MPMX20_01019 -1.1 -4.2 Protoheme IX farnesyltransferase compare
MPMX20_02880 -1.1 -8.4 hypothetical protein compare
MPMX20_03309 -1.1 -1.5 Phosphocarrier protein HPr compare
MPMX20_00773 -1.1 -5.3 Catabolite repressor/activator compare
MPMX20_02020 -1.1 -4.0 Mannose-6-phosphate isomerase compare
MPMX20_02893 -1.1 -4.8 hypothetical protein compare
MPMX20_03488 -1.1 -2.9 Persistence and stress-resistance antitoxin PasI compare
MPMX20_02905 -1.1 -5.5 hypothetical protein compare
MPMX20_02875 -1.1 -5.8 hypothetical protein compare
MPMX20_02867 -1.1 -5.2 hypothetical protein compare
MPMX20_04067 -1.1 -4.4 Lipoprotein NlpI compare
MPMX20_02645 -1.1 -3.8 Ribosome-binding ATPase YchF compare
MPMX20_00739 -1.1 -1.9 Carbamoyl-phosphate synthase small chain compare
MPMX20_00419 -1.1 -5.9 Aspartate ammonia-lyase compare
MPMX20_00133 -1.1 -2.8 Mannitol operon repressor compare
MPMX20_02892 -1.1 -6.2 hypothetical protein compare
MPMX20_01865 -1.1 -5.7 Succinylornithine transaminase compare
MPMX20_03806 -1.1 -1.7 hypothetical protein compare
MPMX20_02866 -1.1 -6.7 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase compare
MPMX20_02883 -1.0 -3.8 hypothetical protein compare
MPMX20_02162 -1.0 -2.6 hypothetical protein compare
MPMX20_02769 -1.0 -2.1 putative transcriptional regulatory protein YebC compare
MPMX20_02886 -1.0 -6.0 hypothetical protein compare
MPMX20_03208 -1.0 -2.7 NADH-quinone oxidoreductase subunit L compare
MPMX20_03215 -1.0 -1.7 NADH-quinone oxidoreductase subunit E compare
MPMX20_03813 -1.0 -4.3 Heme chaperone HemW compare
MPMX20_02546 -1.0 -1.6 hypothetical protein compare
MPMX20_02891 -1.0 -5.9 hypothetical protein compare
MPMX20_02902 -1.0 -5.1 Serine/threonine-protein phosphatase 1 compare
MPMX20_02874 -1.0 -7.2 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For mixed community Mixed culture; Achromobacter sp. TBS_048 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=outgrowth_in_LB_with_kan50 in Enterobacter sp. TBS_079

For mixed community Mixed culture; Achromobacter sp. TBS_048 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=outgrowth_in_LB_with_kan50 across organisms