Experiment set1S75 for Enterobacter sp. TBS_079

Compare to:

mutant library grown in Supernatant; Variovorax sp. TBS_050B grown in R2A

200 most detrimental genes:

  gene name fitness t score description  
MPMX20_02912 +2.2 4.9 hypothetical protein compare
MPMX20_00388 +1.3 2.0 hypothetical protein compare
MPMX20_01952 +1.2 2.3 hypothetical protein compare
MPMX20_01118 +0.9 1.0 hypothetical protein compare
MPMX20_01413 +0.9 2.5 Molybdopterin synthase sulfur carrier subunit compare
MPMX20_00386 +0.8 2.5 hypothetical protein compare
MPMX20_04066 +0.8 1.3 ATP-dependent RNA helicase DeaD compare
MPMX20_04619 +0.7 2.9 D-ribose pyranase compare
MPMX20_01768 +0.7 1.3 Large ribosomal RNA subunit accumulation protein YceD compare
MPMX20_04242 +0.7 1.1 hypothetical protein compare
MPMX20_02149 +0.6 2.4 3-hydroxyadipyl-CoA dehydrogenase compare
MPMX20_02946 +0.6 2.5 Flagellar biosynthetic protein FliQ compare
MPMX20_02143 +0.6 1.8 1,2-phenylacetyl-CoA epoxidase, subunit B compare
MPMX20_04344 +0.6 1.3 hypothetical protein compare
MPMX20_03678 +0.6 1.1 tRNA-Met compare
MPMX20_00258 +0.6 2.2 Diacylglycerol kinase compare
MPMX20_04615 +0.6 4.0 Ribokinase compare
MPMX20_03218 +0.6 2.1 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_01989 +0.6 2.4 hypothetical protein compare
MPMX20_04009 +0.6 1.7 hypothetical protein compare
MPMX20_04759 +0.6 1.1 IS3 family transposase ISYen3 compare
MPMX20_01551 +0.6 3.0 Leucine-responsive regulatory protein compare
MPMX20_01919 +0.5 1.1 putative protein YdiE compare
MPMX20_00708 +0.5 2.4 Aerobic respiration control protein ArcA compare
MPMX20_00435 +0.5 2.2 Fumarate reductase subunit C compare
MPMX20_01378 +0.5 2.1 Nicotinamide riboside transporter PnuC compare
MPMX20_03627 +0.5 3.1 RNA polymerase sigma factor RpoS compare
MPMX20_00793 +0.5 1.0 DNA gyrase inhibitor YacG compare
MPMX20_00287 +0.5 2.9 Holin-like protein CidA compare
MPMX20_04058 +0.5 1.9 hypothetical protein compare
MPMX20_04566 +0.5 2.0 L-rhamnose mutarotase compare
MPMX20_04558 +0.5 1.8 Protein YiiM compare
MPMX20_04245 +0.5 2.1 General stress protein 14 compare
MPMX20_00929 +0.5 1.6 tRNA-Thr compare
MPMX20_01722 +0.5 0.7 putative csgAB operon transcriptional regulatory protein compare
MPMX20_03094 +0.5 1.3 HTH-type transcriptional regulator MlrA compare
MPMX20_01846 +0.5 0.9 hypothetical protein compare
MPMX20_02950 +0.5 2.2 hypothetical protein compare
MPMX20_03498 +0.5 1.4 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_02475 +0.5 1.7 Putrescine export system permease protein SapB compare
MPMX20_01005 +0.5 1.5 Transcriptional repressor NrdR compare
MPMX20_02287 +0.5 1.3 hypothetical protein compare
MPMX20_00030 +0.5 1.2 hypothetical protein compare
MPMX20_02224 +0.5 1.9 hypothetical protein compare
MPMX20_02258 +0.5 1.8 hypothetical protein compare
MPMX20_04614 +0.5 3.0 Ribose operon repressor compare
MPMX20_00387 +0.4 2.5 hypothetical protein compare
MPMX20_00611 +0.4 1.2 hypothetical protein compare
MPMX20_00833 +0.4 2.7 RNA 2',3'-cyclic phosphodiesterase compare
MPMX20_01391 +0.4 2.4 Molybdenum transport system permease protein ModB compare
MPMX20_01775 +0.4 2.2 3-oxoacyl-[acyl-carrier-protein] synthase 2 compare
MPMX20_04714 +0.4 3.8 hypothetical protein compare
MPMX20_03435 +0.4 1.0 Pyridoxine 5'-phosphate synthase compare
MPMX20_02935 +0.4 3.0 Flagellar M-ring protein compare
MPMX20_03254 +0.4 1.0 USG-1 protein compare
MPMX20_01757 +0.4 1.8 Flagellar basal-body rod protein FlgG compare
MPMX20_00675 +0.4 1.6 hypothetical protein compare
MPMX20_03996 +0.4 2.4 UTP pyrophosphatase compare
MPMX20_01759 +0.4 2.8 Flagellar P-ring protein compare
MPMX20_02913 +0.4 1.3 hypothetical protein compare
MPMX20_01361 +0.4 2.4 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_02775 +0.4 2.1 Carboxy-S-adenosyl-L-methionine synthase compare
MPMX20_03225 +0.4 1.9 hypothetical protein compare
MPMX20_02203 +0.4 0.8 hypothetical protein compare
MPMX20_02942 +0.4 2.7 Flagellar motor switch protein FliM compare
MPMX20_02034 +0.4 1.1 hypothetical protein compare
MPMX20_03655 +0.4 3.3 Signal transduction histidine-protein kinase BarA compare
MPMX20_01381 +0.4 1.5 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive compare
MPMX20_00132 +0.4 2.0 putative protein YibL compare
MPMX20_02057 +0.4 2.4 hypothetical protein compare
MPMX20_00306 +0.4 2.4 D-allose transport system permease protein AlsC compare
MPMX20_04060 +0.4 1.2 hypothetical protein compare
MPMX20_03387 +0.4 1.8 hypothetical protein compare
MPMX20_01837 +0.4 1.6 hypothetical protein compare
MPMX20_02738 +0.4 2.2 RNA chaperone ProQ compare
MPMX20_00473 +0.4 2.2 3-keto-L-gulonate-6-phosphate decarboxylase UlaD compare
MPMX20_02295 +0.4 0.6 hypothetical protein compare
MPMX20_04359 +0.4 1.4 hypothetical protein compare
MPMX20_02800 +0.4 2.7 Motility protein A compare
MPMX20_03571 +0.4 0.8 tRNA-Arg compare
MPMX20_02801 +0.4 2.4 Flagellar transcriptional regulator FlhC compare
MPMX20_00739 +0.4 1.3 Carbamoyl-phosphate synthase small chain compare
MPMX20_01362 +0.4 1.2 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_04486 +0.4 2.4 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MPMX20_04055 +0.4 2.0 hypothetical protein compare
MPMX20_01753 +0.4 2.8 Flagellar basal-body rod protein FlgC compare
MPMX20_02940 +0.4 2.6 Flagellar hook-length control protein compare
MPMX20_02178 +0.4 2.2 hypothetical protein compare
MPMX20_00972 +0.4 3.1 Anti-adapter protein IraP compare
MPMX20_00369 +0.4 2.4 hypothetical protein compare
MPMX20_01731 +0.4 1.9 hypothetical protein compare
MPMX20_02382 +0.4 1.5 hypothetical protein compare
MPMX20_02938 +0.4 2.7 Flagellum-specific ATP synthase compare
MPMX20_04704 +0.4 2.1 Protein TraV compare
MPMX20_04133 +0.4 1.8 Stringent starvation protein A compare
MPMX20_01393 +0.4 2.0 Pyridoxal phosphate phosphatase YbhA compare
MPMX20_04007 +0.4 1.4 putative protein YqjD compare
MPMX20_02839 +0.4 2.9 Response regulator UvrY compare
MPMX20_03814 +0.4 1.4 hypothetical protein compare
MPMX20_01761 +0.4 2.7 Flagellar hook-associated protein 1 compare
MPMX20_03301 +0.4 0.8 hypothetical protein compare
MPMX20_04052 +0.3 1.2 hypothetical protein compare
MPMX20_01691 +0.3 1.4 hypothetical protein compare
MPMX20_00238 +0.3 1.8 hypothetical protein compare
MPMX20_01800 +0.3 1.6 N-acetyl-D-glucosamine kinase compare
MPMX20_04373 +0.3 1.6 hypothetical protein compare
MPMX20_04491 +0.3 1.3 Thioredoxin 1 compare
MPMX20_01021 +0.3 1.0 Cytochrome bo(3) ubiquinol oxidase subunit 3 compare
MPMX20_01427 +0.3 1.9 Protein FimG compare
MPMX20_00775 +0.3 0.9 Ribosomal RNA small subunit methyltransferase H compare
MPMX20_03088 +0.3 1.3 Peptidyl-lysine N-acetyltransferase YiaC compare
MPMX20_02664 +0.3 1.4 hypothetical protein compare
MPMX20_04517 +0.3 1.6 HTH-type transcriptional repressor FabR compare
MPMX20_04729 +0.3 2.8 Nucleoid occlusion protein compare
MPMX20_00810 +0.3 1.5 hypothetical protein compare
MPMX20_04516 +0.3 1.9 Inner membrane protein YijD compare
MPMX20_00680 +0.3 1.4 Deoxyribose-phosphate aldolase compare
MPMX20_01073 +0.3 0.7 Nucleoid-associated protein YbaB compare
MPMX20_04335 +0.3 1.5 PanD regulatory factor compare
MPMX20_02569 +0.3 1.3 Putative sulfur carrier protein YedF compare
MPMX20_02937 +0.3 2.6 Flagellar assembly protein FliH compare
MPMX20_01749 +0.3 1.7 Flagella synthesis protein FlgN compare
MPMX20_00070 +0.3 2.0 hypothetical protein compare
MPMX20_03189 +0.3 1.7 Nicotinamide-nucleotide amidohydrolase PncC compare
MPMX20_02944 +0.3 2.4 Flagellar protein FliO compare
MPMX20_02372 +0.3 1.1 HTH-type transcriptional repressor NsrR compare
MPMX20_03991 +0.3 1.7 Autoinducer 2 import ATP-binding protein LsrA compare
MPMX20_03137 +0.3 2.2 Mannonate dehydratase compare
MPMX20_01178 +0.3 2.1 hypothetical protein compare
MPMX20_01262 +0.3 2.0 hypothetical protein compare
MPMX20_02803 +0.3 2.1 Universal stress protein C compare
MPMX20_01755 +0.3 2.2 Flagellar hook protein FlgE compare
MPMX20_03525 +0.3 2.4 Type I secretion system membrane fusion protein PrsE compare
MPMX20_01995 +0.3 2.2 Transcriptional regulator SlyA compare
MPMX20_02319 +0.3 2.3 Transcriptional regulatory protein CusR compare
MPMX20_04040 +0.3 1.1 PTS system fructose-specific EIIB component compare
MPMX20_02753 +0.3 0.9 Inner membrane protein YebE compare
MPMX20_00696 +0.3 1.9 Zinc-type alcohol dehydrogenase-like protein compare
MPMX20_03731 +0.3 1.9 Spermidine/putrescine import ATP-binding protein PotA compare
MPMX20_04196 +0.3 1.9 Ribosomal RNA small subunit methyltransferase B compare
MPMX20_01548 +0.3 1.1 putative ABC transporter ATP-binding/permease protein compare
MPMX20_04433 +0.3 2.5 Trk system potassium uptake protein TrkH compare
MPMX20_01886 +0.3 1.8 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase compare
MPMX20_00700 +0.3 1.0 Trp operon repressor compare
MPMX20_02661 +0.3 1.7 hypothetical protein compare
MPMX20_04552 +0.3 1.1 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_01978 +0.3 1.9 HTH-type transcriptional repressor PurR compare
MPMX20_02109 +0.3 1.5 IS3 family transposase ISEal1 compare
MPMX20_00029 +0.3 1.3 hypothetical protein compare
MPMX20_03630 +0.3 1.3 5'/3'-nucleotidase SurE compare
MPMX20_02855 +0.3 2.3 Flagellar hook-associated protein 2 compare
MPMX20_01420 +0.3 1.4 putative multidrug ABC transporter permease YbhR compare
MPMX20_04710 +0.3 2.5 hypothetical protein compare
MPMX20_02179 +0.3 1.4 hypothetical protein compare
MPMX20_00892 +0.3 1.5 HTH-type transcriptional regulator DmlR compare
MPMX20_01855 +0.3 1.3 hypothetical protein compare
MPMX20_02489 +0.3 2.0 Fatty acid oxidation complex subunit alpha compare
MPMX20_03412 +0.3 1.5 HTH-type transcriptional regulator IscR compare
MPMX20_03983 +0.3 1.2 hypothetical protein compare
MPMX20_01447 +0.3 1.2 Transcriptional regulator MntR compare
MPMX20_04555 +0.3 1.6 Periplasmic protein CpxP compare
MPMX20_02028 +0.3 1.8 Dihydromonapterin reductase compare
MPMX20_03671 +0.3 1.8 Glycine cleavage system transcriptional activator compare
MPMX20_00048 +0.3 1.3 putative inner membrane transporter YicL compare
MPMX20_02134 +0.3 1.4 hypothetical protein compare
MPMX20_00803 +0.3 1.8 Extracellular exo-alpha-(1->5)-L-arabinofuranosidase compare
MPMX20_02666 +0.3 1.5 Protein phosphatase PrpC compare
MPMX20_00281 +0.3 1.4 Regulatory protein SoxS compare
MPMX20_01593 +0.3 1.5 Alkanesulfonate monooxygenase compare
MPMX20_00483 +0.3 1.8 FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_03009 +0.3 1.6 Chain length determinant protein compare
MPMX20_01836 +0.3 0.9 hypothetical protein compare
MPMX20_02854 +0.3 2.3 Flagellin compare
MPMX20_03431 +0.3 1.2 N-acetylmuramic acid 6-phosphate etherase compare
MPMX20_01053 +0.3 1.5 Nickel/cobalt efflux system RcnA compare
MPMX20_04574 +0.3 1.9 Sulfur carrier protein FdhD compare
MPMX20_01134 +0.3 0.9 hypothetical protein compare
MPMX20_02339 +0.3 1.2 hypothetical protein compare
MPMX20_03856 +0.3 1.3 2,5-diketo-D-gluconic acid reductase A compare
MPMX20_00817 +0.3 1.7 Blue copper oxidase CueO compare
MPMX20_03172 +0.3 1.8 Alpha-ketoglutarate-dependent dioxygenase AlkB compare
MPMX20_02954 +0.3 1.9 Inner membrane protein YedI compare
MPMX20_03524 +0.3 2.3 Vitamin B12 import ATP-binding protein BtuD compare
MPMX20_00903 +0.3 1.8 Oligopeptide transport ATP-binding protein OppD compare
MPMX20_01303 +0.3 1.0 Glutamine transport ATP-binding protein GlnQ compare
MPMX20_04722 +0.3 1.1 hypothetical protein compare
MPMX20_03810 +0.3 1.8 hypothetical protein compare
MPMX20_00214 +0.3 1.2 Sulfur carrier protein ThiS compare
MPMX20_00246 +0.3 1.3 dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose 3-N-acetyltransferase compare
MPMX20_04299 +0.3 1.1 Pimeloyl-[acyl-carrier protein] methyl ester esterase compare
MPMX20_00532 +0.3 1.3 hypothetical protein compare
MPMX20_04071 +0.3 1.6 tRNA pseudouridine synthase B compare
MPMX20_02413 +0.3 1.4 Inner membrane protein YdcZ compare
MPMX20_03628 +0.3 2.0 Murein hydrolase activator NlpD compare
MPMX20_03083 +0.3 1.5 Adenine permease AdeQ compare
MPMX20_03405 +0.3 0.8 Protein IscX compare
MPMX20_00995 +0.3 1.0 Acyl carrier protein phosphodiesterase compare
MPMX20_02036 +0.3 1.5 Methylated-DNA--protein-cysteine methyltransferase compare
MPMX20_03450 +0.3 1.8 putative tRNA/rRNA methyltransferase YfiF compare
MPMX20_00288 +0.3 1.1 Inner membrane protein YohK compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in supernatant experiments

For supernatant Supernatant; Variovorax sp. TBS_050B grown in R2A across organisms