Experiment set1S74 for Enterobacter sp. TBS_079

Compare to:

mutant library grown in Supernatant; Variovorax sp. TBS_050B grown in R2A

200 most important genes:

  gene name fitness t score description  
MPMX20_04768 -5.3 -14.3 hypothetical protein compare
MPMX20_01950 -4.5 -5.0 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_01607 -4.1 -7.2 Outer membrane protein A compare
MPMX20_03154 -3.9 -11.5 Inner membrane protein YejM compare
MPMX20_03153 -3.1 -3.6 hypothetical protein compare
MPMX20_01028 -2.7 -1.8 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_02929 -2.7 -5.2 hypothetical protein compare
MPMX20_01366 -2.5 -7.2 Tol-Pal system protein TolQ compare
MPMX20_04530 -2.5 -10.8 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03022 -2.4 -1.7 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_01368 -2.3 -5.1 hypothetical protein compare
MPMX20_01367 -2.3 -6.4 Tol-Pal system protein TolR compare
MPMX20_01369 -2.2 -8.0 Tol-Pal system protein TolB compare
MPMX20_04483 -2.2 -3.0 Lipid III flippase compare
MPMX20_04440 -2.2 -2.5 Transcription antitermination protein RfaH compare
MPMX20_00807 -2.2 -4.8 Pyruvate dehydrogenase E1 component compare
MPMX20_03010 -2.2 -6.2 UDP-glucose 4-epimerase compare
MPMX20_00102 -2.1 -1.5 hypothetical protein compare
MPMX20_03006 -2.1 -8.6 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_03264 -2.1 -4.9 Chorismate synthase compare
MPMX20_02701 -2.0 -2.4 Fatty acid metabolism regulator protein compare
MPMX20_04119 -2.0 -2.7 DNA polymerase III subunit chi compare
MPMX20_04595 -2.0 -2.3 Glutamine synthetase compare
MPMX20_04641 -1.9 -3.4 Phosphate transport system permease protein PstA compare
MPMX20_04162 -1.8 -5.3 3-dehydroquinate dehydratase compare
MPMX20_01370 -1.8 -5.1 Peptidoglycan-associated lipoprotein compare
MPMX20_04278 -1.8 -4.9 3-dehydroquinate synthase compare
MPMX20_03007 -1.8 -5.0 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_00106 -1.8 -5.3 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_04442 -1.7 -4.0 Sec-independent protein translocase protein TatC compare
MPMX20_00453 -1.7 -2.1 RNA-binding protein Hfq compare
MPMX20_04469 -1.7 -3.9 Adenylate cyclase compare
MPMX20_02896 -1.6 -10.1 Lysozyme RrrD compare
MPMX20_03018 -1.6 -3.6 hypothetical protein compare
MPMX20_02881 -1.6 -2.6 hypothetical protein compare
MPMX20_02885 -1.6 -6.2 hypothetical protein compare
MPMX20_03003 -1.6 -8.0 Histidinol-phosphate aminotransferase compare
MPMX20_03685 -1.6 -4.5 RecBCD enzyme subunit RecC compare
MPMX20_03509 -1.5 -1.4 hypothetical protein compare
MPMX20_03002 -1.5 -8.9 Histidinol dehydrogenase compare
MPMX20_00712 -1.5 -7.8 Threonine synthase compare
MPMX20_04275 -1.5 -1.9 Ribulose-phosphate 3-epimerase compare
MPMX20_02895 -1.5 -7.5 hypothetical protein compare
MPMX20_03004 -1.5 -6.4 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_03683 -1.5 -3.4 RecBCD enzyme subunit RecB compare
MPMX20_04640 -1.4 -2.5 Phosphate transport system permease protein PstC compare
MPMX20_01566 -1.4 -7.8 Phosphoserine aminotransferase compare
MPMX20_03019 -1.4 -8.3 hypothetical protein compare
MPMX20_03020 -1.3 -5.7 hypothetical protein compare
MPMX20_02344 -1.3 -1.0 hypothetical protein compare
MPMX20_01029 -1.3 -3.5 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_04531 -1.3 -6.3 Cystathionine gamma-synthase compare
MPMX20_04463 -1.3 -5.0 DNA helicase II compare
MPMX20_00537 -1.2 -6.8 Trehalose-6-phosphate hydrolase compare
MPMX20_01552 -1.2 -4.4 hypothetical protein compare
MPMX20_04243 -1.2 -1.5 hypothetical protein compare
MPMX20_03001 -1.2 -6.7 ATP phosphoribosyltransferase compare
MPMX20_03008 -1.2 -5.6 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_02886 -1.2 -7.6 hypothetical protein compare
MPMX20_00441 -1.2 -1.6 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_03571 -1.1 -1.6 tRNA-Arg compare
MPMX20_00110 -1.1 -8.2 hypothetical protein compare
MPMX20_04489 -1.1 -8.2 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_04465 -1.1 -4.2 Tyrosine recombinase XerC compare
MPMX20_03309 -1.1 -1.7 Phosphocarrier protein HPr compare
MPMX20_04452 -1.1 -5.5 HTH-type transcriptional regulator MetR compare
MPMX20_02512 -1.1 -7.1 Tryptophan biosynthesis protein TrpCF compare
MPMX20_04194 -1.1 -1.3 Peptide deformylase compare
MPMX20_00745 -1.1 -3.0 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_00693 -1.1 -4.8 Phosphoserine phosphatase compare
MPMX20_02514 -1.1 -3.8 Tryptophan synthase alpha chain compare
MPMX20_04650 -1.1 -3.1 tRNA modification GTPase MnmE compare
MPMX20_00109 -1.1 -8.1 hypothetical protein compare
MPMX20_00711 -1.1 -6.8 Homoserine kinase compare
MPMX20_00570 -1.1 -7.6 putative BsuMI modification methylase subunit YdiO compare
MPMX20_01334 -1.1 -4.4 Phosphoglucomutase compare
MPMX20_02393 -1.1 -1.2 hypothetical protein compare
MPMX20_02890 -1.1 -7.6 hypothetical protein compare
MPMX20_02898 -1.1 -4.7 hypothetical protein compare
MPMX20_03310 -1.1 -2.5 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_02766 -1.1 -2.2 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_04443 -1.1 -1.6 Sec-independent protein translocase protein TatB compare
MPMX20_01355 -1.1 -0.9 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_00775 -1.1 -2.2 Ribosomal RNA small subunit methyltransferase H compare
MPMX20_02203 -1.1 -1.6 hypothetical protein compare
MPMX20_03090 -1.0 -1.5 Methionine--tRNA ligase compare
MPMX20_04601 -1.0 -1.8 DNA polymerase I compare
MPMX20_02884 -1.0 -8.2 hypothetical protein compare
MPMX20_02891 -1.0 -6.9 hypothetical protein compare
MPMX20_00710 -1.0 -7.2 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_00108 -1.0 -7.8 hypothetical protein compare
MPMX20_02883 -1.0 -5.5 hypothetical protein compare
MPMX20_02476 -1.0 -2.2 Putrescine export system permease protein SapC compare
MPMX20_01382 -1.0 -2.0 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_02889 -1.0 -7.3 hypothetical protein compare
MPMX20_01354 -1.0 -1.6 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_03771 -1.0 -5.9 D-3-phosphoglycerate dehydrogenase compare
MPMX20_03267 -1.0 -2.5 Phosphohistidine phosphatase SixA compare
MPMX20_03407 -1.0 -2.0 Chaperone protein HscA compare
MPMX20_03005 -1.0 -4.2 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_00230 -1.0 -4.2 Homoserine O-succinyltransferase compare
MPMX20_01567 -1.0 -4.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_00768 -1.0 -6.4 3-isopropylmalate dehydrogenase compare
MPMX20_03021 -1.0 -4.7 hypothetical protein compare
MPMX20_02864 -0.9 -3.3 hypothetical protein compare
MPMX20_02887 -0.9 -3.3 hypothetical protein compare
MPMX20_02893 -0.9 -3.5 hypothetical protein compare
MPMX20_00105 -0.9 -5.5 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_02546 -0.9 -1.8 hypothetical protein compare
MPMX20_02769 -0.9 -1.6 putative transcriptional regulatory protein YebC compare
MPMX20_02591 -0.9 -2.7 DNA-binding protein H-NS compare
MPMX20_00626 -0.9 -1.2 hypothetical protein compare
MPMX20_02892 -0.9 -5.6 hypothetical protein compare
MPMX20_03443 -0.9 -1.8 Anti-sigma-E factor RseA compare
MPMX20_03385 -0.9 -3.1 hypothetical protein compare
MPMX20_02920 -0.9 -6.2 hypothetical protein compare
MPMX20_04504 -0.9 -3.4 hypothetical protein compare
MPMX20_02862 -0.9 -5.8 hypothetical protein compare
MPMX20_02513 -0.9 -5.5 Tryptophan synthase beta chain compare
MPMX20_04110 -0.9 -2.6 Nitrogen regulatory protein compare
MPMX20_00998 -0.9 -2.2 Sec translocon accessory complex subunit YajC compare
MPMX20_02869 -0.9 -6.9 hypothetical protein compare
MPMX20_02919 -0.9 -4.0 hypothetical protein compare
MPMX20_03466 -0.9 -5.4 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_02873 -0.9 -4.1 hypothetical protein compare
MPMX20_02882 -0.8 -4.4 hypothetical protein compare
MPMX20_03753 -0.8 -3.1 Tyrosine recombinase XerD compare
MPMX20_04346 -0.8 -5.9 Zinc/cadmium/lead-transporting P-type ATPase compare
MPMX20_03334 -0.8 -1.3 hypothetical protein compare
MPMX20_02866 -0.8 -5.8 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase compare
MPMX20_02888 -0.8 -3.4 hypothetical protein compare
MPMX20_03468 -0.8 -3.3 T-protein compare
MPMX20_00767 -0.8 -4.7 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_02510 -0.8 -5.7 Anthranilate synthase component 1 compare
MPMX20_01972 -0.8 -1.0 tRNA-Val compare
MPMX20_04374 -0.8 -2.4 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_04626 -0.8 -2.0 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_02878 -0.8 -4.0 hypothetical protein compare
MPMX20_02255 -0.8 -2.6 Metal-binding protein ZinT compare
MPMX20_02696 -0.8 -4.0 Murein tetrapeptide carboxypeptidase compare
MPMX20_02488 -0.8 -4.9 Cyclic di-GMP phosphodiesterase PdeR compare
MPMX20_01919 -0.8 -2.2 putative protein YdiE compare
MPMX20_01969 -0.8 -2.9 Carbonic anhydrase 1 compare
MPMX20_02668 -0.8 -1.4 hypothetical protein compare
MPMX20_02903 -0.8 -2.8 hypothetical protein compare
MPMX20_04277 -0.8 -3.1 Cell division protein DamX compare
MPMX20_02901 -0.8 -4.8 hypothetical protein compare
MPMX20_02477 -0.8 -2.0 Peptide transport system ATP-binding protein SapD compare
MPMX20_04731 -0.8 -3.4 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_02880 -0.8 -6.0 hypothetical protein compare
MPMX20_03756 -0.8 -3.4 FAD assembly factor SdhE compare
MPMX20_02511 -0.8 -4.5 Bifunctional protein TrpGD compare
MPMX20_02770 -0.8 -2.3 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_04541 -0.8 -2.6 Cell division protein ZapB compare
MPMX20_03945 -0.7 -2.4 hypothetical protein compare
MPMX20_01768 -0.7 -1.7 Large ribosomal RNA subunit accumulation protein YceD compare
MPMX20_03046 -0.7 -4.4 hypothetical protein compare
MPMX20_02767 -0.7 -2.5 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_01358 -0.7 -2.1 Mannosyl-D-glycerate transport/metabolism system repressor MngR compare
MPMX20_02863 -0.7 -5.3 hypothetical protein compare
MPMX20_02162 -0.7 -2.2 hypothetical protein compare
MPMX20_02908 -0.7 -3.8 hypothetical protein compare
MPMX20_01181 -0.7 -2.3 Putative transferase YhbX compare
MPMX20_04189 -0.7 -2.2 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_01286 -0.7 -1.1 Sec-independent protein translocase protein TatE compare
MPMX20_00766 -0.7 -3.0 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_03986 -0.7 -1.7 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_02868 -0.7 -3.9 Protein UmuD compare
MPMX20_02116 -0.7 -1.2 hypothetical protein compare
MPMX20_02931 -0.7 -3.9 hypothetical protein compare
MPMX20_04761 -0.7 -1.7 IS3 family transposase IS1222 compare
MPMX20_03806 -0.7 -1.9 hypothetical protein compare
MPMX20_01134 -0.7 -1.9 hypothetical protein compare
MPMX20_01433 -0.7 -3.0 putative protein McbA compare
MPMX20_01333 -0.7 -2.1 Negative modulator of initiation of replication compare
MPMX20_02867 -0.7 -3.3 hypothetical protein compare
MPMX20_04340 -0.7 -2.9 Cell division ATP-binding protein FtsE compare
MPMX20_02925 -0.7 -5.3 hypothetical protein compare
MPMX20_02926 -0.6 -3.1 hypothetical protein compare
MPMX20_02915 -0.6 -3.7 hypothetical protein compare
MPMX20_02902 -0.6 -4.0 Serine/threonine-protein phosphatase 1 compare
MPMX20_02870 -0.6 -4.9 hypothetical protein compare
MPMX20_02874 -0.6 -4.9 hypothetical protein compare
MPMX20_01697 -0.6 -1.6 Putative aminoacrylate peracid reductase RutC compare
MPMX20_00350 -0.6 -1.9 hypothetical protein compare
MPMX20_00769 -0.6 -4.7 2-isopropylmalate synthase compare
MPMX20_02923 -0.6 -4.3 hypothetical protein compare
MPMX20_04427 -0.6 -0.8 5S ribosomal RNA compare
MPMX20_04722 -0.6 -2.7 hypothetical protein compare
MPMX20_02254 -0.6 -2.1 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX20_04532 -0.6 -1.6 Met repressor compare
MPMX20_03054 -0.6 -2.1 hypothetical protein compare
MPMX20_03338 -0.6 -1.7 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_00720 -0.6 -0.8 Chaperone protein DnaK compare
MPMX20_04316 -0.6 -1.6 hypothetical protein compare
MPMX20_01351 -0.6 -1.2 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_01098 -0.6 -1.5 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_02342 -0.6 -3.3 hypothetical protein compare
MPMX20_03517 -0.6 -1.9 hypothetical protein compare
MPMX20_01082 -0.6 -2.8 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in supernatant experiments

For supernatant Supernatant; Variovorax sp. TBS_050B grown in R2A across organisms