Experiment set1S70 for Enterobacter sp. TBS_079

Compare to:

mutant library grown in Supernatant; Achromobacter sp. TBS_048 grown in R2A

200 most important genes:

  gene name fitness t score description  
MPMX20_01950 -6.0 -4.1 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_04443 -5.1 -3.5 Sec-independent protein translocase protein TatB compare
MPMX20_01567 -5.0 -5.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_04768 -5.0 -15.0 hypothetical protein compare
MPMX20_00768 -4.9 -18.6 3-isopropylmalate dehydrogenase compare
MPMX20_00693 -4.8 -10.2 Phosphoserine phosphatase compare
MPMX20_03264 -4.4 -7.9 Chorismate synthase compare
MPMX20_03006 -4.3 -12.0 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_03154 -4.2 -11.0 Inner membrane protein YejM compare
MPMX20_00767 -4.2 -14.5 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_00766 -4.1 -9.2 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_04189 -4.1 -6.3 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_04278 -4.0 -6.7 3-dehydroquinate synthase compare
MPMX20_00712 -3.9 -14.0 Threonine synthase compare
MPMX20_04162 -3.9 -6.0 3-dehydroquinate dehydratase compare
MPMX20_04119 -3.9 -2.7 DNA polymerase III subunit chi compare
MPMX20_01607 -3.9 -7.3 Outer membrane protein A compare
MPMX20_01369 -3.9 -11.6 Tol-Pal system protein TolB compare
MPMX20_02510 -3.6 -15.8 Anthranilate synthase component 1 compare
MPMX20_01368 -3.5 -7.5 hypothetical protein compare
MPMX20_03771 -3.5 -12.3 D-3-phosphoglycerate dehydrogenase compare
MPMX20_03468 -3.5 -8.5 T-protein compare
MPMX20_02514 -3.4 -6.7 Tryptophan synthase alpha chain compare
MPMX20_01566 -3.4 -12.0 Phosphoserine aminotransferase compare
MPMX20_00807 -3.4 -4.6 Pyruvate dehydrogenase E1 component compare
MPMX20_03002 -3.4 -12.3 Histidinol dehydrogenase compare
MPMX20_02513 -3.4 -12.5 Tryptophan synthase beta chain compare
MPMX20_03004 -3.3 -10.3 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_02512 -3.2 -12.4 Tryptophan biosynthesis protein TrpCF compare
MPMX20_02511 -3.2 -11.6 Bifunctional protein TrpGD compare
MPMX20_04496 -3.1 -11.4 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_00711 -3.0 -13.8 Homoserine kinase compare
MPMX20_04531 -3.0 -11.9 Cystathionine gamma-synthase compare
MPMX20_03466 -3.0 -9.6 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_04499 -2.9 -15.0 Dihydroxy-acid dehydratase compare
MPMX20_00769 -2.9 -10.7 2-isopropylmalate synthase compare
MPMX20_03005 -2.8 -7.8 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_01366 -2.8 -4.9 Tol-Pal system protein TolQ compare
MPMX20_01355 -2.8 -1.6 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_04483 -2.8 -2.7 Lipid III flippase compare
MPMX20_01367 -2.8 -6.5 Tol-Pal system protein TolR compare
MPMX20_01354 -2.7 -2.5 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_04524 -2.6 -13.3 Phosphoenolpyruvate carboxylase compare
MPMX20_03007 -2.6 -9.7 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_04442 -2.6 -7.0 Sec-independent protein translocase protein TatC compare
MPMX20_03001 -2.6 -10.9 ATP phosphoribosyltransferase compare
MPMX20_00831 -2.5 -3.9 RNA polymerase-binding transcription factor DksA compare
MPMX20_03003 -2.5 -9.3 Histidinol-phosphate aminotransferase compare
MPMX20_01028 -2.5 -2.4 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_00230 -2.5 -7.2 Homoserine O-succinyltransferase compare
MPMX20_04595 -2.5 -2.3 Glutamine synthetase compare
MPMX20_01382 -2.4 -4.5 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_04275 -2.4 -3.5 Ribulose-phosphate 3-epimerase compare
MPMX20_01370 -2.4 -4.0 Peptidoglycan-associated lipoprotein compare
MPMX20_02896 -2.3 -16.1 Lysozyme RrrD compare
MPMX20_04530 -2.3 -10.9 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03153 -2.2 -3.1 hypothetical protein compare
MPMX20_03685 -2.1 -4.7 RecBCD enzyme subunit RecC compare
MPMX20_02701 -2.1 -2.9 Fatty acid metabolism regulator protein compare
MPMX20_00102 -2.1 -2.0 hypothetical protein compare
MPMX20_03852 -2.1 -10.5 Cystathionine beta-lyase MetC compare
MPMX20_03683 -2.1 -3.4 RecBCD enzyme subunit RecB compare
MPMX20_04452 -2.0 -7.7 HTH-type transcriptional regulator MetR compare
MPMX20_04497 -2.0 -7.4 HTH-type transcriptional regulator GltC compare
MPMX20_01768 -1.9 -3.2 Large ribosomal RNA subunit accumulation protein YceD compare
MPMX20_02768 -1.9 -2.4 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_02895 -1.9 -9.4 hypothetical protein compare
MPMX20_04427 -1.9 -1.8 5S ribosomal RNA compare
MPMX20_04601 -1.8 -2.6 DNA polymerase I compare
MPMX20_02885 -1.8 -9.0 hypothetical protein compare
MPMX20_02574 -1.8 -3.0 putative intracellular septation protein A compare
MPMX20_04641 -1.8 -3.5 Phosphate transport system permease protein PstA compare
MPMX20_04650 -1.8 -3.9 tRNA modification GTPase MnmE compare
MPMX20_04520 -1.8 -10.2 Argininosuccinate lyase compare
MPMX20_04110 -1.8 -5.3 Nitrogen regulatory protein compare
MPMX20_02898 -1.7 -8.6 hypothetical protein compare
MPMX20_03010 -1.7 -5.4 UDP-glucose 4-epimerase compare
MPMX20_03008 -1.7 -4.6 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_03022 -1.7 -2.3 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_03090 -1.7 -2.3 Methionine--tRNA ligase compare
MPMX20_00899 -1.7 -1.7 Ribonuclease HI compare
MPMX20_01552 -1.7 -5.2 hypothetical protein compare
MPMX20_01334 -1.6 -6.9 Phosphoglucomutase compare
MPMX20_00740 -1.6 -7.9 Carbamoyl-phosphate synthase large chain compare
MPMX20_02920 -1.6 -6.8 hypothetical protein compare
MPMX20_00480 -1.6 -3.0 50S ribosomal protein L9 compare
MPMX20_02879 -1.6 -4.0 hypothetical protein compare
MPMX20_02869 -1.6 -13.1 hypothetical protein compare
MPMX20_04498 -1.6 -6.9 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_00570 -1.5 -10.1 putative BsuMI modification methylase subunit YdiO compare
MPMX20_02883 -1.5 -7.2 hypothetical protein compare
MPMX20_01741 -1.5 -3.7 Dihydroorotase compare
MPMX20_01029 -1.5 -3.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_03021 -1.5 -6.7 hypothetical protein compare
MPMX20_02886 -1.5 -8.5 hypothetical protein compare
MPMX20_02902 -1.5 -8.4 Serine/threonine-protein phosphatase 1 compare
MPMX20_03705 -1.5 -7.9 Diaminopimelate decarboxylase compare
MPMX20_04642 -1.4 -2.1 Phosphate import ATP-binding protein PstB compare
MPMX20_02894 -1.4 -4.0 hypothetical protein compare
MPMX20_02884 -1.4 -10.2 hypothetical protein compare
MPMX20_02919 -1.4 -6.7 hypothetical protein compare
MPMX20_01005 -1.4 -4.3 Transcriptional repressor NrdR compare
MPMX20_02888 -1.4 -7.1 hypothetical protein compare
MPMX20_00710 -1.4 -9.0 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_02928 -1.4 -2.8 hypothetical protein compare
MPMX20_00086 -1.4 -2.7 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_02872 -1.4 -7.0 hypothetical protein compare
MPMX20_02767 -1.3 -3.4 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_02878 -1.3 -6.0 hypothetical protein compare
MPMX20_01969 -1.3 -3.5 Carbonic anhydrase 1 compare
MPMX20_03019 -1.3 -9.1 hypothetical protein compare
MPMX20_03310 -1.3 -3.5 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_03435 -1.3 -3.2 Pyridoxine 5'-phosphate synthase compare
MPMX20_00721 -1.3 -2.8 Chaperone protein DnaJ compare
MPMX20_02875 -1.3 -9.0 hypothetical protein compare
MPMX20_00492 -1.3 -6.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX20_04523 -1.3 -6.9 Acetylornithine deacetylase compare
MPMX20_03018 -1.3 -4.1 hypothetical protein compare
MPMX20_03440 -1.3 -3.8 Elongation factor 4 compare
MPMX20_02344 -1.3 -1.9 hypothetical protein compare
MPMX20_00106 -1.3 -3.5 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_02863 -1.3 -10.2 hypothetical protein compare
MPMX20_02905 -1.3 -6.9 hypothetical protein compare
MPMX20_02908 -1.3 -9.0 hypothetical protein compare
MPMX20_02890 -1.3 -8.8 hypothetical protein compare
MPMX20_04463 -1.3 -4.5 DNA helicase II compare
MPMX20_02861 -1.2 -8.9 hypothetical protein compare
MPMX20_02882 -1.2 -7.9 hypothetical protein compare
MPMX20_02901 -1.2 -7.9 hypothetical protein compare
MPMX20_03479 -1.2 -2.4 30S ribosomal protein S16 compare
MPMX20_02770 -1.2 -4.6 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_02868 -1.2 -7.4 Protein UmuD compare
MPMX20_02874 -1.2 -10.3 hypothetical protein compare
MPMX20_03408 -1.2 -1.8 Co-chaperone protein HscB compare
MPMX20_02918 -1.2 -7.1 hypothetical protein compare
MPMX20_04339 -1.2 -6.3 Cell division protein FtsX compare
MPMX20_04301 -1.2 -1.8 Fe/S biogenesis protein NfuA compare
MPMX20_02864 -1.2 -3.6 hypothetical protein compare
MPMX20_03681 -1.2 -7.6 Amino-acid acetyltransferase compare
MPMX20_02766 -1.2 -2.4 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_02862 -1.2 -7.9 hypothetical protein compare
MPMX20_02915 -1.2 -8.8 hypothetical protein compare
MPMX20_03653 -1.2 -8.0 GTP pyrophosphokinase compare
MPMX20_04077 -1.2 -6.5 Argininosuccinate synthase compare
MPMX20_02891 -1.2 -9.0 hypothetical protein compare
MPMX20_03753 -1.2 -3.9 Tyrosine recombinase XerD compare
MPMX20_02880 -1.2 -9.2 hypothetical protein compare
MPMX20_02867 -1.1 -6.0 hypothetical protein compare
MPMX20_00739 -1.1 -3.0 Carbamoyl-phosphate synthase small chain compare
MPMX20_01790 -1.1 -5.7 NADH dehydrogenase compare
MPMX20_00826 -1.1 -3.6 Pantothenate synthetase compare
MPMX20_03163 -1.1 -1.5 hypothetical protein compare
MPMX20_02889 -1.1 -8.0 hypothetical protein compare
MPMX20_04346 -1.1 -6.9 Zinc/cadmium/lead-transporting P-type ATPase compare
MPMX20_04521 -1.1 -6.0 Acetylglutamate kinase compare
MPMX20_03385 -1.1 -3.8 hypothetical protein compare
MPMX20_00720 -1.1 -2.0 Chaperone protein DnaK compare
MPMX20_02870 -1.1 -9.0 hypothetical protein compare
MPMX20_04194 -1.1 -1.7 Peptide deformylase compare
MPMX20_02860 -1.1 -5.9 hypothetical protein compare
MPMX20_03641 -1.1 -5.3 Phosphoadenosine phosphosulfate reductase compare
MPMX20_02876 -1.1 -5.7 hypothetical protein compare
MPMX20_02866 -1.1 -7.9 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase compare
MPMX20_04597 -1.0 -4.9 DNA-binding transcriptional regulator NtrC compare
MPMX20_03443 -1.0 -3.3 Anti-sigma-E factor RseA compare
MPMX20_03046 -1.0 -6.3 hypothetical protein compare
MPMX20_04465 -1.0 -3.6 Tyrosine recombinase XerC compare
MPMX20_02931 -1.0 -5.9 hypothetical protein compare
MPMX20_02916 -1.0 -4.3 hypothetical protein compare
MPMX20_02909 -1.0 -4.5 hypothetical protein compare
MPMX20_02927 -1.0 -5.1 hypothetical protein compare
MPMX20_00928 -1.0 -6.5 Gamma-glutamyl phosphate reductase compare
MPMX20_02873 -1.0 -4.6 hypothetical protein compare
MPMX20_02871 -1.0 -6.5 hypothetical protein compare
MPMX20_02887 -1.0 -3.0 hypothetical protein compare
MPMX20_02924 -1.0 -5.8 hypothetical protein compare
MPMX20_02907 -1.0 -6.0 hypothetical protein compare
MPMX20_03636 -1.0 -3.6 Adenylyl-sulfate kinase compare
MPMX20_02930 -1.0 -6.2 hypothetical protein compare
MPMX20_03338 -1.0 -2.5 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_02926 -1.0 -2.7 hypothetical protein compare
MPMX20_02892 -1.0 -6.4 hypothetical protein compare
MPMX20_00197 -1.0 -1.6 tRNA-Tyr compare
MPMX20_01349 -1.0 -3.6 Citrate synthase compare
MPMX20_02925 -1.0 -8.0 hypothetical protein compare
MPMX20_01256 -1.0 -3.3 hypothetical protein compare
MPMX20_04200 -1.0 -5.0 HTH-type transcriptional regulator ZntR compare
MPMX20_04374 -1.0 -1.6 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_04467 -0.9 -4.4 Diaminopimelate epimerase compare
MPMX20_00241 -0.9 -5.3 Glucose-6-phosphate isomerase compare
MPMX20_03308 -0.9 -4.4 Cysteine synthase A compare
MPMX20_02668 -0.9 -1.7 hypothetical protein compare
MPMX20_02877 -0.9 -5.1 hypothetical protein compare
MPMX20_03986 -0.9 -2.5 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_02899 -0.9 -4.1 hypothetical protein compare
MPMX20_01901 -0.9 -1.1 Integration host factor subunit alpha compare
MPMX20_04640 -0.9 -2.4 Phosphate transport system permease protein PstC compare
MPMX20_02903 -0.9 -3.8 hypothetical protein compare
MPMX20_01704 -0.9 -2.2 hypothetical protein compare
MPMX20_00827 -0.9 -4.3 3-methyl-2-oxobutanoate hydroxymethyltransferase compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in supernatant experiments

For supernatant Supernatant; Achromobacter sp. TBS_048 grown in R2A across organisms