Experiment set1S67 for Enterobacter sp. TBS_079

Compare to:

mutant library grown in Supernatant; Variovorax sp. TBS_050B grown in LB

200 most important genes:

  gene name fitness t score description  
MPMX20_04768 -5.8 -17.9 hypothetical protein compare
MPMX20_01361 -4.7 -7.2 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_01355 -4.4 -1.7 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_01362 -4.1 -5.6 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_01548 -4.0 -2.8 putative ABC transporter ATP-binding/permease protein compare
MPMX20_01354 -3.9 -4.6 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_00453 -3.9 -3.7 RNA-binding protein Hfq compare
MPMX20_00722 -3.9 -10.6 Na(+)/H(+) antiporter NhaA compare
MPMX20_01366 -3.7 -7.2 Tol-Pal system protein TolQ compare
MPMX20_00831 -3.6 -4.9 RNA polymerase-binding transcription factor DksA compare
MPMX20_01549 -3.6 -2.5 ATP-binding/permease protein CydD compare
MPMX20_01368 -3.6 -6.1 hypothetical protein compare
MPMX20_04442 -3.5 -6.7 Sec-independent protein translocase protein TatC compare
MPMX20_04443 -3.4 -3.8 Sec-independent protein translocase protein TatB compare
MPMX20_00807 -3.4 -4.6 Pyruvate dehydrogenase E1 component compare
MPMX20_01367 -3.3 -6.6 Tol-Pal system protein TolR compare
MPMX20_04119 -3.2 -3.1 DNA polymerase III subunit chi compare
MPMX20_04275 -3.2 -3.1 Ribulose-phosphate 3-epimerase compare
MPMX20_01950 -3.2 -4.4 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_04444 -3.0 -2.3 Sec-independent protein translocase protein TatA compare
MPMX20_04642 -2.9 -2.8 Phosphate import ATP-binding protein PstB compare
MPMX20_00106 -2.9 -3.9 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_03685 -2.8 -2.8 RecBCD enzyme subunit RecC compare
MPMX20_03019 -2.8 -15.2 hypothetical protein compare
MPMX20_01369 -2.7 -8.9 Tol-Pal system protein TolB compare
MPMX20_01607 -2.7 -6.0 Outer membrane protein A compare
MPMX20_01552 -2.6 -6.0 hypothetical protein compare
MPMX20_04483 -2.5 -2.9 Lipid III flippase compare
MPMX20_02576 -2.4 -5.1 Protein TonB compare
MPMX20_04530 -2.4 -10.3 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03218 -2.4 -5.2 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_02766 -2.3 -4.9 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_03683 -2.3 -2.2 RecBCD enzyme subunit RecB compare
MPMX20_03018 -2.3 -5.4 hypothetical protein compare
MPMX20_01567 -2.3 -7.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_02591 -2.2 -5.7 DNA-binding protein H-NS compare
MPMX20_04440 -2.2 -2.5 Transcription antitermination protein RfaH compare
MPMX20_03021 -2.1 -8.4 hypothetical protein compare
MPMX20_02701 -2.1 -2.7 Fatty acid metabolism regulator protein compare
MPMX20_00105 -2.1 -12.5 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_04141 -2.1 -6.2 Arginine repressor compare
MPMX20_03022 -2.1 -2.0 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_04489 -2.1 -13.5 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_00721 -2.1 -3.4 Chaperone protein DnaJ compare
MPMX20_00110 -2.1 -13.9 hypothetical protein compare
MPMX20_04162 -2.1 -5.4 3-dehydroquinate dehydratase compare
MPMX20_03020 -2.1 -6.9 hypothetical protein compare
MPMX20_04463 -2.0 -6.7 DNA helicase II compare
MPMX20_04278 -2.0 -5.4 3-dehydroquinate synthase compare
MPMX20_02344 -2.0 -3.8 hypothetical protein compare
MPMX20_04140 -2.0 -7.8 Malate dehydrogenase compare
MPMX20_03010 -2.0 -5.7 UDP-glucose 4-epimerase compare
MPMX20_03310 -2.0 -4.5 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_03090 -2.0 -2.4 Methionine--tRNA ligase compare
MPMX20_03285 -2.0 -1.8 hypothetical protein compare
MPMX20_00109 -2.0 -14.3 hypothetical protein compare
MPMX20_01065 -1.9 -6.2 Multidrug efflux pump subunit AcrA compare
MPMX20_04465 -1.9 -6.4 Tyrosine recombinase XerC compare
MPMX20_00108 -1.9 -14.4 hypothetical protein compare
MPMX20_01064 -1.9 -11.1 Multidrug efflux pump subunit AcrB compare
MPMX20_03882 -1.9 -7.7 Outer membrane protein TolC compare
MPMX20_02896 -1.8 -12.5 Lysozyme RrrD compare
MPMX20_01363 -1.8 -5.5 Cytochrome bd-I ubiquinol oxidase subunit X compare
MPMX20_01353 -1.8 -4.8 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_00419 -1.8 -10.1 Aspartate ammonia-lyase compare
MPMX20_01349 -1.8 -5.7 Citrate synthase compare
MPMX20_01370 -1.8 -4.8 Peptidoglycan-associated lipoprotein compare
MPMX20_04189 -1.8 -5.3 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_02574 -1.7 -3.0 putative intracellular septation protein A compare
MPMX20_03753 -1.7 -5.4 Tyrosine recombinase XerD compare
MPMX20_01869 -1.7 -8.5 Succinylglutamate desuccinylase compare
MPMX20_02768 -1.7 -2.6 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_00102 -1.7 -2.2 hypothetical protein compare
MPMX20_04301 -1.7 -3.9 Fe/S biogenesis protein NfuA compare
MPMX20_04556 -1.7 -6.0 Transcriptional regulatory protein CpxR compare
MPMX20_03154 -1.6 -7.8 Inner membrane protein YejM compare
MPMX20_04279 -1.6 -3.1 Shikimate kinase 1 compare
MPMX20_01866 -1.6 -3.9 Arginine N-succinyltransferase compare
MPMX20_03208 -1.6 -5.1 NADH-quinone oxidoreductase subunit L compare
MPMX20_01351 -1.6 -2.5 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_03017 -1.5 -8.0 hypothetical protein compare
MPMX20_04469 -1.5 -3.8 Adenylate cyclase compare
MPMX20_01334 -1.5 -5.7 Phosphoglucomutase compare
MPMX20_04730 -1.5 -3.3 hypothetical protein compare
MPMX20_04306 -1.5 -5.5 Glycerol-3-phosphate regulon repressor compare
MPMX20_01352 -1.5 -7.3 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_03443 -1.5 -4.7 Anti-sigma-E factor RseA compare
MPMX20_03217 -1.5 -4.3 NADH-quinone oxidoreductase subunit B compare
MPMX20_04276 -1.5 -5.2 DNA adenine methylase compare
MPMX20_00255 -1.5 -5.7 Chorismate pyruvate-lyase compare
MPMX20_02885 -1.5 -6.5 hypothetical protein compare
MPMX20_01350 -1.4 -4.4 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_03767 -1.4 -4.5 Xaa-Pro aminopeptidase compare
MPMX20_03211 -1.4 -3.1 NADH-quinone oxidoreductase subunit I compare
MPMX20_01765 -1.4 -3.6 Ribonuclease E compare
MPMX20_01028 -1.4 -2.0 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_02886 -1.4 -9.0 hypothetical protein compare
MPMX20_00749 -1.4 -4.4 Chaperone SurA compare
MPMX20_04038 -1.4 -4.3 Glucitol operon repressor compare
MPMX20_02890 -1.4 -8.9 hypothetical protein compare
MPMX20_03206 -1.3 -6.4 NADH-quinone oxidoreductase subunit N compare
MPMX20_04641 -1.3 -2.8 Phosphate transport system permease protein PstA compare
MPMX20_04374 -1.3 -1.9 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_01967 -1.3 -3.0 hypothetical protein compare
MPMX20_02732 -1.3 -2.4 PhoP/PhoQ regulator MgrB compare
MPMX20_01029 -1.3 -3.1 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_04346 -1.3 -8.6 Zinc/cadmium/lead-transporting P-type ATPase compare
MPMX20_03213 -1.3 -6.9 NADH-quinone oxidoreductase subunit G compare
MPMX20_00998 -1.3 -2.7 Sec translocon accessory complex subunit YajC compare
MPMX20_01030 -1.3 -4.6 Lon protease compare
MPMX20_03212 -1.2 -4.0 NADH-quinone oxidoreductase subunit H compare
MPMX20_02884 -1.2 -9.1 hypothetical protein compare
MPMX20_02826 -1.2 -1.9 Cold shock-like protein CspB compare
MPMX20_03850 -1.2 -3.7 Biopolymer transport protein ExbD compare
MPMX20_03756 -1.2 -3.2 FAD assembly factor SdhE compare
MPMX20_02929 -1.2 -3.8 hypothetical protein compare
MPMX20_03209 -1.2 -1.9 NADH-quinone oxidoreductase subunit K compare
MPMX20_01958 -1.2 -1.2 Fumarase D compare
MPMX20_02869 -1.2 -10.0 hypothetical protein compare
MPMX20_00570 -1.2 -8.4 putative BsuMI modification methylase subunit YdiO compare
MPMX20_01286 -1.2 -2.1 Sec-independent protein translocase protein TatE compare
MPMX20_01972 -1.2 -1.4 tRNA-Val compare
MPMX20_02883 -1.2 -7.1 hypothetical protein compare
MPMX20_02898 -1.2 -5.7 hypothetical protein compare
MPMX20_01357 -1.2 -4.2 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_03408 -1.1 -1.4 Co-chaperone protein HscB compare
MPMX20_00773 -1.1 -6.5 Catabolite repressor/activator compare
MPMX20_03490 -1.1 -3.1 SsrA-binding protein compare
MPMX20_02867 -1.1 -6.0 hypothetical protein compare
MPMX20_00698 -1.1 -6.7 Energy-dependent translational throttle protein EttA compare
MPMX20_03216 -1.1 -5.7 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_01969 -1.1 -3.6 Carbonic anhydrase 1 compare
MPMX20_02892 -1.1 -5.5 hypothetical protein compare
MPMX20_03267 -1.1 -2.2 Phosphohistidine phosphatase SixA compare
MPMX20_02876 -1.1 -5.3 hypothetical protein compare
MPMX20_03405 -1.1 -2.4 Protein IscX compare
MPMX20_02864 -1.1 -3.6 hypothetical protein compare
MPMX20_02899 -1.0 -4.0 hypothetical protein compare
MPMX20_02926 -1.0 -5.5 hypothetical protein compare
MPMX20_02887 -1.0 -4.2 hypothetical protein compare
MPMX20_01901 -1.0 -1.3 Integration host factor subunit alpha compare
MPMX20_03015 -1.0 -8.5 Phosphoglucosamine mutase compare
MPMX20_04079 -1.0 -1.9 Protein-export membrane protein SecG compare
MPMX20_04004 -1.0 -4.6 Inner membrane protein YqjA compare
MPMX20_00720 -1.0 -1.5 Chaperone protein DnaK compare
MPMX20_04375 -1.0 -4.1 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_04200 -1.0 -5.4 HTH-type transcriptional regulator ZntR compare
MPMX20_01266 -1.0 -2.7 Acireductone dioxygenase compare
MPMX20_00455 -1.0 -5.6 Modulator of FtsH protease HflK compare
MPMX20_02895 -1.0 -4.3 hypothetical protein compare
MPMX20_02877 -1.0 -5.3 hypothetical protein compare
MPMX20_03016 -1.0 -8.0 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_03210 -1.0 -2.8 NADH-quinone oxidoreductase subunit J compare
MPMX20_02973 -1.0 -4.6 hypothetical protein compare
MPMX20_03742 -1.0 -4.5 HTH-type transcriptional regulator GalR compare
MPMX20_03207 -1.0 -3.7 NADH-quinone oxidoreductase subunit M compare
MPMX20_00826 -1.0 -4.6 Pantothenate synthetase compare
MPMX20_00181 -1.0 -5.2 HTH-type transcriptional regulator KdgR compare
MPMX20_02919 -1.0 -4.5 hypothetical protein compare
MPMX20_02917 -0.9 -2.4 hypothetical protein compare
MPMX20_01403 -0.9 -5.4 Biotin synthase compare
MPMX20_00514 -0.9 -3.7 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_03215 -0.9 -2.1 NADH-quinone oxidoreductase subunit E compare
MPMX20_02891 -0.9 -6.3 hypothetical protein compare
MPMX20_03580 -0.9 -3.1 Protein RecA compare
MPMX20_04532 -0.9 -1.6 Met repressor compare
MPMX20_01156 -0.9 -2.1 hypothetical protein compare
MPMX20_01291 -0.9 -5.5 D-alanyl-D-alanine carboxypeptidase DacA compare
MPMX20_02770 -0.9 -3.9 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_04731 -0.9 -4.2 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_03264 -0.9 -2.9 Chorismate synthase compare
MPMX20_04110 -0.9 -3.1 Nitrogen regulatory protein compare
MPMX20_04640 -0.9 -1.8 Phosphate transport system permease protein PstC compare
MPMX20_02872 -0.9 -3.7 hypothetical protein compare
MPMX20_00747 -0.9 -3.3 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_00086 -0.9 -2.3 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_00746 -0.9 -1.8 Protein ApaG compare
MPMX20_04105 -0.9 -1.9 Lipopolysaccharide export system protein LptC compare
MPMX20_02668 -0.9 -1.7 hypothetical protein compare
MPMX20_04639 -0.9 -1.0 Phosphate-binding protein PstS compare
MPMX20_01333 -0.9 -2.9 Negative modulator of initiation of replication compare
MPMX20_04595 -0.9 -1.2 Glutamine synthetase compare
MPMX20_01118 -0.9 -1.1 hypothetical protein compare
MPMX20_02902 -0.9 -5.0 Serine/threonine-protein phosphatase 1 compare
MPMX20_02309 -0.8 -2.8 hypothetical protein compare
MPMX20_01405 -0.8 -4.8 Malonyl-[acyl-carrier protein] O-methyltransferase compare
MPMX20_01356 -0.8 -4.2 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_02875 -0.8 -6.0 hypothetical protein compare
MPMX20_00663 -0.8 -4.9 Ferric iron reductase protein FhuF compare
MPMX20_02901 -0.8 -5.5 hypothetical protein compare
MPMX20_02767 -0.8 -1.9 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_02915 -0.8 -4.6 hypothetical protein compare
MPMX20_02920 -0.8 -4.2 hypothetical protein compare
MPMX20_02927 -0.8 -4.8 hypothetical protein compare
MPMX20_01868 -0.8 -5.2 N-succinylarginine dihydrolase compare
MPMX20_02882 -0.8 -4.1 hypothetical protein compare
MPMX20_01768 -0.8 -1.6 Large ribosomal RNA subunit accumulation protein YceD compare
MPMX20_04625 -0.8 -1.8 Protein MioC compare
MPMX20_01323 -0.8 -5.4 N-acetylglucosamine-6-phosphate deacetylase compare
MPMX20_02908 -0.8 -3.9 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in supernatant experiments

For supernatant Supernatant; Variovorax sp. TBS_050B grown in LB across organisms