Experiment set1S60 for Enterobacter sp. TBS_079

Compare to:

mutant library grown in Supernatant; Achromobacter sp. TBS_048 grown in LB

200 most important genes:

  gene name fitness t score description  
MPMX20_00693 -5.6 -11.4 Phosphoserine phosphatase compare
MPMX20_04768 -5.6 -17.2 hypothetical protein compare
MPMX20_04443 -5.0 -3.4 Sec-independent protein translocase protein TatB compare
MPMX20_03771 -4.9 -12.6 D-3-phosphoglycerate dehydrogenase compare
MPMX20_03264 -4.8 -7.1 Chorismate synthase compare
MPMX20_01950 -4.8 -5.6 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_01368 -4.5 -6.8 hypothetical protein compare
MPMX20_01355 -4.4 -1.8 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_01566 -4.3 -12.8 Phosphoserine aminotransferase compare
MPMX20_01361 -4.2 -9.3 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_01367 -3.8 -9.1 Tol-Pal system protein TolR compare
MPMX20_01362 -3.8 -5.7 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_00807 -3.8 -2.6 Pyruvate dehydrogenase E1 component compare
MPMX20_01382 -3.7 -3.6 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_04275 -3.6 -2.5 Ribulose-phosphate 3-epimerase compare
MPMX20_00722 -3.4 -10.2 Na(+)/H(+) antiporter NhaA compare
MPMX20_01366 -3.4 -7.2 Tol-Pal system protein TolQ compare
MPMX20_01369 -3.3 -9.6 Tol-Pal system protein TolB compare
MPMX20_01548 -3.2 -4.9 putative ABC transporter ATP-binding/permease protein compare
MPMX20_03309 -3.2 -3.7 Phosphocarrier protein HPr compare
MPMX20_03018 -3.2 -5.2 hypothetical protein compare
MPMX20_01549 -3.1 -3.6 ATP-binding/permease protein CydD compare
MPMX20_04442 -3.1 -6.5 Sec-independent protein translocase protein TatC compare
MPMX20_01567 -3.0 -9.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_00453 -2.9 -2.9 RNA-binding protein Hfq compare
MPMX20_04119 -2.9 -3.3 DNA polymerase III subunit chi compare
MPMX20_04483 -2.9 -2.0 Lipid III flippase compare
MPMX20_00106 -2.7 -4.5 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_03310 -2.7 -4.8 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_04532 -2.7 -3.8 Met repressor compare
MPMX20_00712 -2.7 -11.6 Threonine synthase compare
MPMX20_03685 -2.5 -3.8 RecBCD enzyme subunit RecC compare
MPMX20_03019 -2.5 -14.8 hypothetical protein compare
MPMX20_01370 -2.5 -4.0 Peptidoglycan-associated lipoprotein compare
MPMX20_01552 -2.4 -6.1 hypothetical protein compare
MPMX20_03021 -2.3 -9.0 hypothetical protein compare
MPMX20_01028 -2.3 -2.2 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_04489 -2.3 -14.9 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_01029 -2.2 -4.5 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_04639 -2.2 -1.7 Phosphate-binding protein PstS compare
MPMX20_00102 -2.1 -1.5 hypothetical protein compare
MPMX20_03090 -2.1 -2.0 Methionine--tRNA ligase compare
MPMX20_04530 -2.1 -10.0 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03010 -2.1 -5.6 UDP-glucose 4-epimerase compare
MPMX20_00110 -2.1 -13.8 hypothetical protein compare
MPMX20_03020 -2.1 -8.0 hypothetical protein compare
MPMX20_00109 -2.0 -14.3 hypothetical protein compare
MPMX20_03683 -2.0 -3.3 RecBCD enzyme subunit RecB compare
MPMX20_04189 -1.9 -6.6 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_00831 -1.8 -3.6 RNA polymerase-binding transcription factor DksA compare
MPMX20_02591 -1.8 -5.4 DNA-binding protein H-NS compare
MPMX20_04162 -1.8 -3.6 3-dehydroquinate dehydratase compare
MPMX20_03022 -1.8 -3.2 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_02895 -1.8 -7.5 hypothetical protein compare
MPMX20_02896 -1.8 -9.8 Lysozyme RrrD compare
MPMX20_03466 -1.8 -7.6 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_04278 -1.7 -4.6 3-dehydroquinate synthase compare
MPMX20_01607 -1.7 -5.2 Outer membrane protein A compare
MPMX20_03753 -1.7 -6.3 Tyrosine recombinase XerD compare
MPMX20_03017 -1.7 -9.6 hypothetical protein compare
MPMX20_01354 -1.7 -3.1 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_04444 -1.7 -2.0 Sec-independent protein translocase protein TatA compare
MPMX20_00108 -1.6 -11.7 hypothetical protein compare
MPMX20_02701 -1.6 -2.1 Fatty acid metabolism regulator protein compare
MPMX20_02476 -1.6 -2.8 Putrescine export system permease protein SapC compare
MPMX20_00105 -1.6 -8.2 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_02576 -1.6 -3.9 Protein TonB compare
MPMX20_01901 -1.5 -1.9 Integration host factor subunit alpha compare
MPMX20_04465 -1.5 -4.1 Tyrosine recombinase XerC compare
MPMX20_04463 -1.5 -4.7 DNA helicase II compare
MPMX20_00768 -1.5 -9.5 3-isopropylmalate dehydrogenase compare
MPMX20_04642 -1.5 -2.2 Phosphate import ATP-binding protein PstB compare
MPMX20_04556 -1.4 -5.0 Transcriptional regulatory protein CpxR compare
MPMX20_03468 -1.4 -5.3 T-protein compare
MPMX20_00441 -1.4 -1.8 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_02767 -1.4 -3.4 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_03153 -1.4 -2.1 hypothetical protein compare
MPMX20_04670 -1.4 -1.9 hypothetical protein compare
MPMX20_00745 -1.4 -4.5 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_01334 -1.4 -5.7 Phosphoglucomutase compare
MPMX20_02898 -1.4 -6.0 hypothetical protein compare
MPMX20_02886 -1.4 -8.4 hypothetical protein compare
MPMX20_02574 -1.4 -2.6 putative intracellular septation protein A compare
MPMX20_02973 -1.4 -7.0 hypothetical protein compare
MPMX20_02768 -1.3 -2.0 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_00766 -1.3 -5.8 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_04004 -1.3 -5.9 Inner membrane protein YqjA compare
MPMX20_02766 -1.3 -2.8 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_02826 -1.3 -1.5 Cold shock-like protein CspB compare
MPMX20_02901 -1.3 -8.7 hypothetical protein compare
MPMX20_02885 -1.3 -6.6 hypothetical protein compare
MPMX20_04374 -1.2 -3.0 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_03015 -1.2 -10.5 Phosphoglucosamine mutase compare
MPMX20_02884 -1.2 -10.0 hypothetical protein compare
MPMX20_03490 -1.2 -4.3 SsrA-binding protein compare
MPMX20_01790 -1.2 -5.8 NADH dehydrogenase compare
MPMX20_01363 -1.2 -4.6 Cytochrome bd-I ubiquinol oxidase subunit X compare
MPMX20_02546 -1.2 -1.3 hypothetical protein compare
MPMX20_03016 -1.2 -10.0 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_00537 -1.2 -7.1 Trehalose-6-phosphate hydrolase compare
MPMX20_00711 -1.2 -7.2 Homoserine kinase compare
MPMX20_04731 -1.2 -4.6 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_00767 -1.2 -7.0 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_02892 -1.2 -6.3 hypothetical protein compare
MPMX20_02883 -1.2 -6.5 hypothetical protein compare
MPMX20_01351 -1.2 -3.5 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_02902 -1.1 -7.7 Serine/threonine-protein phosphatase 1 compare
MPMX20_03154 -1.1 -6.2 Inner membrane protein YejM compare
MPMX20_02514 -1.1 -3.1 Tryptophan synthase alpha chain compare
MPMX20_02913 -1.1 -1.4 hypothetical protein compare
MPMX20_03226 -1.1 -2.8 Acetate kinase compare
MPMX20_04595 -1.1 -1.4 Glutamine synthetase compare
MPMX20_02864 -1.1 -2.7 hypothetical protein compare
MPMX20_00570 -1.1 -7.5 putative BsuMI modification methylase subunit YdiO compare
MPMX20_00998 -1.1 -2.1 Sec translocon accessory complex subunit YajC compare
MPMX20_02890 -1.1 -6.5 hypothetical protein compare
MPMX20_04640 -1.1 -2.6 Phosphate transport system permease protein PstC compare
MPMX20_02928 -1.0 -1.7 hypothetical protein compare
MPMX20_04552 -1.0 -4.1 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_01030 -1.0 -4.6 Lon protease compare
MPMX20_04253 -1.0 -1.3 Malonate decarboxylase acyl carrier protein compare
MPMX20_02891 -1.0 -6.8 hypothetical protein compare
MPMX20_02513 -1.0 -6.0 Tryptophan synthase beta chain compare
MPMX20_02863 -1.0 -7.8 hypothetical protein compare
MPMX20_02869 -1.0 -8.3 hypothetical protein compare
MPMX20_01616 -1.0 -1.4 Heat shock protein HspQ compare
MPMX20_03002 -1.0 -6.5 Histidinol dehydrogenase compare
MPMX20_02770 -1.0 -3.1 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_04730 -1.0 -2.0 hypothetical protein compare
MPMX20_02918 -1.0 -3.2 hypothetical protein compare
MPMX20_00133 -1.0 -4.4 Mannitol operon repressor compare
MPMX20_04469 -1.0 -2.8 Adenylate cyclase compare
MPMX20_02020 -1.0 -5.3 Mannose-6-phosphate isomerase compare
MPMX20_00197 -1.0 -1.4 tRNA-Tyr compare
MPMX20_03095 -1.0 -1.9 hypothetical protein compare
MPMX20_02908 -1.0 -6.1 hypothetical protein compare
MPMX20_04346 -1.0 -6.4 Zinc/cadmium/lead-transporting P-type ATPase compare
MPMX20_00710 -0.9 -6.4 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_00663 -0.9 -5.7 Ferric iron reductase protein FhuF compare
MPMX20_02920 -0.9 -4.4 hypothetical protein compare
MPMX20_03440 -0.9 -3.4 Elongation factor 4 compare
MPMX20_00775 -0.9 -1.7 Ribosomal RNA small subunit methyltransferase H compare
MPMX20_02871 -0.9 -4.3 hypothetical protein compare
MPMX20_02549 -0.9 -1.7 hypothetical protein compare
MPMX20_02879 -0.9 -2.1 hypothetical protein compare
MPMX20_00455 -0.9 -5.1 Modulator of FtsH protease HflK compare
MPMX20_02905 -0.9 -5.6 hypothetical protein compare
MPMX20_00812 -0.9 -4.0 Aconitate hydratase B compare
MPMX20_02512 -0.9 -5.0 Tryptophan biosynthesis protein TrpCF compare
MPMX20_00746 -0.9 -2.4 Protein ApaG compare
MPMX20_04110 -0.9 -2.4 Nitrogen regulatory protein compare
MPMX20_01394 -0.8 -4.8 6-phosphogluconolactonase compare
MPMX20_03334 -0.8 -1.4 hypothetical protein compare
MPMX20_03208 -0.8 -3.6 NADH-quinone oxidoreductase subunit L compare
MPMX20_02876 -0.8 -5.0 hypothetical protein compare
MPMX20_04277 -0.8 -4.0 Cell division protein DamX compare
MPMX20_03407 -0.8 -2.1 Chaperone protein HscA compare
MPMX20_04375 -0.8 -3.0 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_02862 -0.8 -5.3 hypothetical protein compare
MPMX20_04141 -0.8 -3.6 Arginine repressor compare
MPMX20_00899 -0.8 -1.1 Ribonuclease HI compare
MPMX20_02866 -0.8 -6.2 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase compare
MPMX20_02906 -0.8 -4.6 hypothetical protein compare
MPMX20_02894 -0.8 -2.2 hypothetical protein compare
MPMX20_03951 -0.8 -2.3 hypothetical protein compare
MPMX20_02899 -0.8 -3.3 hypothetical protein compare
MPMX20_02873 -0.8 -3.5 hypothetical protein compare
MPMX20_02927 -0.8 -3.4 hypothetical protein compare
MPMX20_02861 -0.8 -5.7 hypothetical protein compare
MPMX20_02309 -0.8 -2.6 hypothetical protein compare
MPMX20_02917 -0.8 -3.6 hypothetical protein compare
MPMX20_00241 -0.8 -3.8 Glucose-6-phosphate isomerase compare
MPMX20_03986 -0.8 -1.8 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_02929 -0.8 -1.5 hypothetical protein compare
MPMX20_01286 -0.8 -0.6 Sec-independent protein translocase protein TatE compare
MPMX20_02919 -0.8 -4.7 hypothetical protein compare
MPMX20_02875 -0.8 -4.8 hypothetical protein compare
MPMX20_02668 -0.8 -1.6 hypothetical protein compare
MPMX20_02888 -0.8 -3.7 hypothetical protein compare
MPMX20_02874 -0.8 -6.5 hypothetical protein compare
MPMX20_03006 -0.8 -4.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_03386 -0.8 -0.9 putative protein YfgJ compare
MPMX20_03390 -0.8 -3.9 Outer membrane protein assembly factor BamB compare
MPMX20_02872 -0.8 -4.2 hypothetical protein compare
MPMX20_02880 -0.8 -5.7 hypothetical protein compare
MPMX20_01064 -0.7 -5.4 Multidrug efflux pump subunit AcrB compare
MPMX20_02887 -0.7 -3.1 hypothetical protein compare
MPMX20_00769 -0.7 -4.9 2-isopropylmalate synthase compare
MPMX20_01065 -0.7 -4.1 Multidrug efflux pump subunit AcrA compare
MPMX20_02732 -0.7 -2.2 PhoP/PhoQ regulator MgrB compare
MPMX20_03882 -0.7 -4.3 Outer membrane protein TolC compare
MPMX20_02116 -0.7 -1.8 hypothetical protein compare
MPMX20_00721 -0.7 -1.6 Chaperone protein DnaJ compare
MPMX20_02867 -0.7 -3.9 hypothetical protein compare
MPMX20_02596 -0.7 -5.3 Formyltetrahydrofolate deformylase compare
MPMX20_01350 -0.7 -3.0 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_04504 -0.7 -2.7 hypothetical protein compare
MPMX20_04614 -0.7 -4.4 Ribose operon repressor compare
MPMX20_02868 -0.7 -4.3 Protein UmuD compare
MPMX20_04496 -0.7 -4.3 Ketol-acid reductoisomerase (NADP(+)) compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in supernatant experiments

For supernatant Supernatant; Achromobacter sp. TBS_048 grown in LB across organisms