Experiment set1S42 for Rhodanobacter sp. FW510-T8
R2A_PIPES pH 4
Group: pHMedia: R2A_PIPES, pH=4
Culturing: rhodanobacter_T8_ML1, 96 well deep well block, Aerobic, at 23 (C), shaken=700 rpm
Growth: about 3.4 generations
By: Hans and Hira on 01/10/2025
Media components: 0.5 g/L Bacto Peptone, 0.5 g/L casamino acids, 0.5 g/L Yeast Extract, 0.5 g/L D-Glucose, 0.5 g/L Starch, 0.3 g/L Potassium phosphate dibasic, 0.05 g/L Magnesium Sulfate Heptahydrate, 0.3 g/L Sodium pyruvate, 30 mM PIPES sesquisodium salt
Specific Phenotypes
For 10 genes in this experiment
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| N-heterocyclic aromatic compound degradation | 2 |
| Chitin and N-acetylglucosamine utilization | 1 |
| Ton and Tol transport systems | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| nicotinate degradation I | 6 | 1 | 1 |
| superpathway of nicotinate degradation | 18 | 1 | 1 |