Metacyc Pathways for Rhodanobacter sp. FW510-T8

Pathway Steps Found
superpathway of fatty acids biosynthesis (E. coli) 51 / 53
superpathway of histidine, purine, and pyrimidine biosynthesis 44 / 46
superpathway of fatty acid biosynthesis II (plant) 38 / 43
oleate β-oxidation 32 / 35
palmitate biosynthesis II (type II fatty acid synthase) 29 / 31
superpathway of purine nucleotides de novo biosynthesis I 21 / 21
tRNA charging 21 / 21
superpathway of unsaturated fatty acids biosynthesis (E. coli) 20 / 20
superpathway of purine nucleotides de novo biosynthesis II 24 / 26
superpathway of aromatic amino acid biosynthesis 18 / 18
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis 18 / 18
superpathway of branched chain amino acid biosynthesis 17 / 17
superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass 23 / 26
superpathway of glycolysis and the Entner-Doudoroff pathway 16 / 17
superpathway of L-isoleucine biosynthesis I 13 / 13
superpathway of L-tryptophan biosynthesis 13 / 13
Bifidobacterium shunt 14 / 15
biotin biosynthesis I 14 / 15
superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle 19 / 22
glycolysis II (from fructose 6-phosphate) 11 / 11
glycolysis III (from glucose) 11 / 11
aspartate superpathway 21 / 25
oleate biosynthesis IV (anaerobic) 13 / 14
L-histidine biosynthesis 10 / 10
superpathway of L-phenylalanine biosynthesis 10 / 10
superpathway of L-tyrosine biosynthesis 10 / 10
tRNA processing 10 / 10
glycolysis I (from glucose 6-phosphate) 12 / 13
Entner-Doudoroff pathway I 9 / 9
L-arginine biosynthesis III (via N-acetyl-L-citrulline) 9 / 9
L-lysine biosynthesis I 9 / 9
folate transformations III (E. coli) 9 / 9
lipid IVA biosynthesis (P. gingivalis) 9 / 9
palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) 9 / 9
pyrimidine deoxyribonucleotides de novo biosynthesis I 9 / 9
superpathway of coenzyme A biosynthesis I (bacteria) 9 / 9
superpathway of pyrimidine ribonucleotides de novo biosynthesis 9 / 9
superpathway of fatty acid biosynthesis I (E. coli) 14 / 16
homolactic fermentation 11 / 12
superpathway of anaerobic sucrose degradation 16 / 19
pentose phosphate pathway 8 / 8
superpathway of adenosylcobalamin salvage from cobinamide I 8 / 8
8-amino-7-oxononanoate biosynthesis I 10 / 11
O-antigen building blocks biosynthesis (E. coli) 10 / 11
L-methionine salvage cycle III 10 / 11
folate transformations II (plants) 10 / 11
superpathway of thiamine diphosphate biosynthesis II 10 / 11
heterolactic fermentation 15 / 18
superpathway of L-lysine, L-threonine and L-methionine biosynthesis I 15 / 18
L-isoleucine biosynthesis I (from threonine) 7 / 7
anaerobic energy metabolism (invertebrates, cytosol) 7 / 7
chorismate biosynthesis I 7 / 7
superpathway of purine nucleotide salvage 12 / 14
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) 12 / 14
TCA cycle III (animals) 9 / 10
superpathway of heme b biosynthesis from glutamate 9 / 10
superpathway of (Kdo)2-lipid A biosynthesis 14 / 17
superpathway of glucose and xylose degradation 14 / 17
(5Z)-dodecenoate biosynthesis I 6 / 6
L-leucine biosynthesis 6 / 6
L-tryptophan biosynthesis 6 / 6
UMP biosynthesis I 6 / 6
UMP biosynthesis II 6 / 6
adenosylcobinamide-GDP biosynthesis from cobyrinate a,c-diamide 6 / 6
glyoxylate cycle 6 / 6
inosine-5'-phosphate biosynthesis I 6 / 6
lipid IVA biosynthesis (E. coli) 6 / 6
lipid IVA biosynthesis (H. pylori) 6 / 6
lipid IVA biosynthesis (P. putida) 6 / 6
lipid IVA biosynthesis (Vibrio cholerae serogroup O1 El Tor) 6 / 6
lipid IVA biosynthesis (generic) 6 / 6
phosphatidylglycerol biosynthesis I 6 / 6
phosphatidylglycerol biosynthesis II 6 / 6
ppGpp metabolism 6 / 6
superpathway of 5-aminoimidazole ribonucleotide biosynthesis 6 / 6
superpathway of L-threonine biosynthesis 6 / 6
superpathway of guanosine nucleotides de novo biosynthesis I 6 / 6
tetrapyrrole biosynthesis I (from glutamate) 6 / 6
gluconeogenesis I 11 / 13
L-arginine biosynthesis I (via L-ornithine) 8 / 9
TCA cycle II (plants and fungi) 8 / 9
TCA cycle V (2-oxoglutarate synthase) 8 / 9
flavin biosynthesis I (bacteria and plants) 8 / 9
methylerythritol phosphate pathway II 8 / 9
pyrimidine deoxyribonucleotides de novo biosynthesis III 8 / 9
superpathway of adenosylcobalamin salvage from cobinamide II 8 / 9
superpathway of pyrimidine deoxyribonucleoside salvage 8 / 9
superpathway of sulfate assimilation and cysteine biosynthesis 8 / 9
5-aminoimidazole ribonucleotide biosynthesis I 5 / 5
5-aminoimidazole ribonucleotide biosynthesis II 5 / 5
8-amino-7-oxononanoate biosynthesis IV 5 / 5
cis-vaccenate biosynthesis 5 / 5
CMP-3-deoxy-D-manno-octulosonate biosynthesis 5 / 5
L-histidine degradation II 5 / 5
L-ornithine biosynthesis I 5 / 5
NAD salvage pathway II (PNC IV cycle) 5 / 5
UDP-N-acetyl-D-glucosamine biosynthesis I 5 / 5
adenosylcobalamin salvage from cobalamin 5 / 5
adenosylcobinamide-GDP salvage from cobinamide I 5 / 5
chorismate biosynthesis from 3-dehydroquinate 5 / 5
dTDP-β-L-rhamnose biosynthesis 5 / 5
inosine-5'-phosphate biosynthesis II 5 / 5
nitrate reduction I (denitrification) 5 / 5
nitrate reduction VII (denitrification) 5 / 5
pentose phosphate pathway (non-oxidative branch) I 5 / 5
polyisoprenoid biosynthesis (E. coli) 5 / 5
superpathway of adenosine nucleotides de novo biosynthesis I 5 / 5
superpathway of coenzyme A biosynthesis III (mammals) 5 / 5
formaldehyde assimilation III (dihydroxyacetone cycle) 10 / 12
gluconeogenesis III 10 / 12
peptidoglycan biosynthesis I (meso-diaminopimelate containing) 10 / 12
superpathway of L-methionine biosynthesis (by sulfhydrylation) 10 / 12
superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP) 10 / 12
superpathway of glyoxylate bypass and TCA 10 / 12
superpathway of phospholipid biosynthesis III (E. coli) 10 / 12
superpathway of tetrahydrofolate biosynthesis and salvage 10 / 12
L-histidine degradation VI 7 / 8
UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) 7 / 8
nitrogen remobilization from senescing leaves 7 / 8
partial TCA cycle (obligate autotrophs) 7 / 8
superpathway of guanosine nucleotides de novo biosynthesis II 7 / 8
superpathway of L-lysine, L-threonine and L-methionine biosynthesis II 12 / 15
trans-4-hydroxy-L-proline degradation II 4 / 4
CDP-diacylglycerol biosynthesis I 4 / 4
CDP-diacylglycerol biosynthesis II 4 / 4
GDP-mannose biosynthesis 4 / 4
L-arginine degradation VI (arginase 2 pathway) 4 / 4
L-proline biosynthesis I (from L-glutamate) 4 / 4
L-valine biosynthesis 4 / 4
assimilatory sulfate reduction I 4 / 4
biotin biosynthesis from 8-amino-7-oxononanoate I 4 / 4
biotin biosynthesis from 8-amino-7-oxononanoate II 4 / 4
biotin-carboxyl carrier protein assembly 4 / 4
chlorinated phenols degradation 4 / 4
coenzyme A biosynthesis I (bacteria) 4 / 4
coenzyme A biosynthesis II (eukaryotic) 4 / 4
gondoate biosynthesis (anaerobic) 4 / 4
guanosine ribonucleotides de novo biosynthesis 4 / 4
phosphopantothenate biosynthesis I 4 / 4
pyrimidine deoxyribonucleotide phosphorylation 4 / 4
queuosine biosynthesis I (de novo) 4 / 4
reactive oxygen species degradation 4 / 4
siroheme biosynthesis 4 / 4
superpathway of L-alanine biosynthesis 4 / 4
superpathway of pyrimidine nucleobases salvage 4 / 4
colanic acid building blocks biosynthesis 9 / 11
superpathway of L-threonine metabolism 14 / 18
3-methylbutanol biosynthesis (engineered) 6 / 7
S-methyl-5-thio-α-D-ribose 1-phosphate degradation I 6 / 7
L-lysine biosynthesis III 6 / 7
L-lysine biosynthesis VI 6 / 7
NAD salvage pathway I (PNC VI cycle) 6 / 7
ethene biosynthesis III (microbes) 6 / 7
fatty acid β-oxidation I (generic) 6 / 7
pyridoxal 5'-phosphate biosynthesis I 6 / 7
pyrimidine deoxyribonucleotides de novo biosynthesis IV 6 / 7
superpathway of adenosine nucleotides de novo biosynthesis II 6 / 7
thiazole component of thiamine diphosphate biosynthesis II 6 / 7
superpathway of glyoxylate cycle and fatty acid degradation 11 / 14
2-methyladeninyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP 3 / 3
2-oxoglutarate decarboxylation to succinyl-CoA 3 / 3
2-oxoisovalerate decarboxylation to isobutanoyl-CoA 3 / 3
5-hydroxybenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP 3 / 3
5-methoxy-6-methylbenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP 3 / 3
5-methoxybenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP 3 / 3
5-methylbenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP 3 / 3
N-acetylglucosamine degradation II 3 / 3
D-galactonate degradation 3 / 3
L-alanine degradation II (to D-lactate) 3 / 3
L-arginine degradation I (arginase pathway) 3 / 3
L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway) 3 / 3
L-asparagine degradation III (mammalian) 3 / 3
L-cysteine degradation II 3 / 3
L-homoserine biosynthesis 3 / 3
L-ornithine biosynthesis II 3 / 3
L-phenylalanine biosynthesis I 3 / 3
L-proline biosynthesis III (from L-ornithine) 3 / 3
L-serine degradation 3 / 3
L-tyrosine biosynthesis I 3 / 3
UTP and CTP de novo biosynthesis 3 / 3
acrylate degradation II 3 / 3
adeninyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP 3 / 3
adenosine ribonucleotides de novo biosynthesis 3 / 3
adenosylcobalamin biosynthesis from adenosylcobinamide-GDP I 3 / 3
ammonia assimilation cycle III 3 / 3
assimilatory sulfate reduction III 3 / 3
benzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP 3 / 3
benzoyl-CoA biosynthesis 3 / 3
cardiolipin biosynthesis II 3 / 3
dTMP de novo biosynthesis (mitochondrial) 3 / 3
ethanol degradation II 3 / 3
ethanol degradation IV 3 / 3
fatty acid biosynthesis initiation (type II) 3 / 3
formaldehyde oxidation II (glutathione-dependent) 3 / 3
glycine biosynthesis II 3 / 3
glycine cleavage 3 / 3
glycine degradation 3 / 3
ketolysis 3 / 3
pentose phosphate pathway (oxidative branch) I 3 / 3
pentose phosphate pathway (partial) 3 / 3
putrescine biosynthesis II 3 / 3
pyruvate decarboxylation to acetyl CoA I 3 / 3
pyruvate fermentation to acetate II 3 / 3
pyruvate fermentation to acetate V 3 / 3
superpathway of acetate utilization and formation 3 / 3
superpathway of ammonia assimilation (plants) 3 / 3
tetrahydrofolate biosynthesis I 3 / 3
trehalose degradation IV 3 / 3
L-arginine biosynthesis II (acetyl cycle) 8 / 10
Rubisco shunt 8 / 10
TCA cycle I (prokaryotic) 8 / 10
glycolysis IV 8 / 10
superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae) 8 / 10
superpathway of tetrahydrofolate biosynthesis 8 / 10
superpathway of thiamine diphosphate biosynthesis I 8 / 10
superpathway of anaerobic energy metabolism (invertebrates) 13 / 17
(5Z)-dodecenoate biosynthesis II 5 / 6
5-oxo-L-proline metabolism 5 / 6
L-leucine degradation I 5 / 6
L-threonine degradation I 5 / 6
NAD de novo biosynthesis I 5 / 6
TCA cycle VIII (Chlamydia) 5 / 6
UMP biosynthesis III 5 / 6
adenosylcobinamide-GDP salvage from cobinamide II 5 / 6
biotin biosynthesis II 5 / 6
fatty acid salvage 5 / 6
inosine-5'-phosphate biosynthesis III 5 / 6
lipid IVA biosynthesis (2,3-diamino-2,3-dideoxy-D-glucopyranose-containing) 5 / 6
pentose phosphate pathway (non-oxidative branch) II 5 / 6
stearate biosynthesis II (bacteria and plants) 5 / 6
taxadiene biosynthesis (engineered) 10 / 13
3-dehydroquinate biosynthesis I 2 / 2
4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis I 2 / 2
4-aminobenzoate biosynthesis I 2 / 2
N-acetylglucosamine degradation I 2 / 2
trans, trans-farnesyl diphosphate biosynthesis 2 / 2
CMP phosphorylation 2 / 2
CO2 fixation into oxaloacetate (anaplerotic) 2 / 2
D-mannose degradation II 2 / 2
Entner-Doudoroff shunt 2 / 2
Kdo transfer to lipid IVA (Brucella) 2 / 2
Kdo transfer to lipid IVA (E. coli) 2 / 2
Kdo transfer to lipid IVA (H. pylori) 2 / 2
Kdo transfer to lipid IVA (P. gingivalis) 2 / 2
Kdo transfer to lipid IVA (P. putida) 2 / 2
Kdo transfer to lipid IVA (generic) 2 / 2
L-alanine biosynthesis I 2 / 2
L-alanine degradation I 2 / 2
L-cysteine biosynthesis I 2 / 2
L-cysteine biosynthesis III (from L-homocysteine) 2 / 2
L-cysteine degradation III 2 / 2
L-glutamate biosynthesis I 2 / 2
L-phenylalanine biosynthesis III (cytosolic, plants) 2 / 2
L-threonine biosynthesis 2 / 2
L-threonine degradation II 2 / 2
N-end rule pathway I (prokaryotic) 2 / 2
NADH to cytochrome bd oxidase electron transfer I 2 / 2
UDP-α-D-glucose biosynthesis 2 / 2
UDP-α-D-xylose biosynthesis 2 / 2
acetate and ATP formation from acetyl-CoA I 2 / 2
adenine and adenosine salvage II 2 / 2
adenosine deoxyribonucleotides de novo biosynthesis I 2 / 2
ammonia assimilation cycle I 2 / 2
ammonia assimilation cycle II 2 / 2
choline degradation I 2 / 2
di-trans,poly-cis-undecaprenyl phosphate biosynthesis 2 / 2
flavin salvage 2 / 2
glutathione biosynthesis 2 / 2
glycine betaine biosynthesis I (Gram-negative bacteria) 2 / 2
glycine betaine biosynthesis II (Gram-positive bacteria) 2 / 2
glycolate and glyoxylate degradation II 2 / 2
guanine and guanosine salvage II 2 / 2
guanosine deoxyribonucleotides de novo biosynthesis I 2 / 2
hydroxymethylpyrimidine salvage 2 / 2
lipoate biosynthesis and incorporation I 2 / 2
malate/L-aspartate shuttle pathway 2 / 2
maltose degradation 2 / 2
methylsalicylate degradation 2 / 2
phosphatidylserine and phosphatidylethanolamine biosynthesis I 2 / 2
polyphosphate metabolism 2 / 2
sedoheptulose bisphosphate bypass 2 / 2
spermidine biosynthesis I 2 / 2
succinate to cytochrome bd oxidase electron transfer 2 / 2
sulfate activation for sulfonation 2 / 2
superoxide radicals degradation 2 / 2
superpathway of L-asparagine biosynthesis 2 / 2
tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate 2 / 2
thiamine diphosphate biosynthesis I (E. coli) 2 / 2
thiamine diphosphate biosynthesis II (Bacillus) 2 / 2
trehalose degradation II (cytosolic) 2 / 2
trehalose degradation VI (periplasmic) 2 / 2
L-lysine biosynthesis II 7 / 9
NAD de novo biosynthesis II (from tryptophan) 7 / 9
TCA cycle IV (2-oxoglutarate decarboxylase) 7 / 9
TCA cycle VII (acetate-producers) 7 / 9
flavin biosynthesis III (fungi) 7 / 9
formaldehyde assimilation II (assimilatory RuMP Cycle) 7 / 9
methylerythritol phosphate pathway I 7 / 9
sucrose biosynthesis I (from photosynthesis) 7 / 9
ubiquinol-8 biosynthesis (late decarboxylation) 7 / 9
mixed acid fermentation 12 / 16
2-methylcitrate cycle I 4 / 5
L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde 4 / 5
L-tyrosine degradation I 4 / 5
NAD salvage pathway V (PNC V cycle) 4 / 5
adipate degradation 4 / 5
cytosolic NADPH production (yeast) 4 / 5
dTDP-3-acetamido-α-D-fucose biosynthesis 4 / 5
dZTP biosynthesis 4 / 5
fatty acid elongation -- saturated 4 / 5
folate polyglutamylation 4 / 5
pyrimidine deoxyribonucleosides salvage 4 / 5
pyruvate fermentation to isobutanol (engineered) 4 / 5
sucrose degradation II (sucrose synthase) 4 / 5
superpathway of L-cysteine biosynthesis (mammalian) 4 / 5
superpathway of fatty acid biosynthesis initiation 4 / 5
thiamine diphosphate salvage II 4 / 5
L-methionine salvage cycle I (bacteria and plants) 9 / 12
octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 9 / 12
superpathway of ubiquinol-8 biosynthesis (early decarboxylation) 9 / 12
hexitol fermentation to lactate, formate, ethanol and acetate 14 / 19
β-alanine biosynthesis III 1 / 1
3-(4-hydroxyphenyl)pyruvate biosynthesis 1 / 1
3-methylthiopropanoate biosynthesis 1 / 1
4-hydroxybenzoate biosynthesis II (bacteria) 1 / 1
S-methyl-5'-thioadenosine degradation II 1 / 1
cis-cyclopropane fatty acid (CFA) biosynthesis 1 / 1
ATP biosynthesis 1 / 1
L-alanine biosynthesis II 1 / 1
L-alanine biosynthesis III 1 / 1
L-alanine degradation III 1 / 1
L-alanine degradation IV 1 / 1
L-asparagine biosynthesis I 1 / 1
L-asparagine biosynthesis II 1 / 1
L-asparagine degradation I 1 / 1
L-aspartate biosynthesis 1 / 1
L-aspartate degradation I 1 / 1
L-cysteine degradation IV 1 / 1
L-glutamate biosynthesis IV 1 / 1
L-glutamate biosynthesis V 1 / 1
L-glutamate degradation I 1 / 1
L-glutamine biosynthesis I 1 / 1
L-glutamine degradation I 1 / 1
L-glutamine degradation II 1 / 1
L-phenylalanine degradation I (aerobic) 1 / 1
L-tyrosine biosynthesis IV 1 / 1
NADP biosynthesis 1 / 1
PRPP biosynthesis 1 / 1
S-adenosyl-L-methionine biosynthesis 1 / 1
UDP-α-D-galactose biosynthesis 1 / 1
UDP-α-D-glucuronate biosynthesis (from UDP-glucose) 1 / 1
UDP-N-acetyl-D-galactosamine biosynthesis I 1 / 1
acetaldehyde biosynthesis I 1 / 1
acetate and ATP formation from acetyl-CoA III 1 / 1
acetate conversion to acetyl-CoA 1 / 1
acetate formation from acetyl-CoA (succinate) 1 / 1
acyl-CoA hydrolysis 1 / 1
adenine and adenosine salvage VI 1 / 1
adenosine nucleotides degradation III 1 / 1
alanine racemization 1 / 1
arginine dependent acid resistance 1 / 1
fatty acid β-oxidation III (unsaturated, odd number) 1 / 1
geranyl diphosphate biosynthesis 1 / 1
geranylgeranyl diphosphate biosynthesis 1 / 1
glutathionylspermidine biosynthesis 1 / 1
glycine biosynthesis I 1 / 1
glycine biosynthesis IV 1 / 1
lactose degradation III 1 / 1
long-chain fatty acid activation 1 / 1
menaquinol-4 biosynthesis I 1 / 1
menaquinol-6 biosynthesis 1 / 1
menaquinol-8 biosynthesis 1 / 1
menaquinol-9 biosynthesis 1 / 1
nonaprenyl diphosphate biosynthesis I 1 / 1
octaprenyl diphosphate biosynthesis 1 / 1
phenol degradation I (aerobic) 1 / 1
phosphate acquisition 1 / 1
phosphonoacetate degradation 1 / 1
pyrimidine nucleobases salvage I 1 / 1
pyruvate fermentation to (R)-lactate 1 / 1
serine racemization 1 / 1
sulfide oxidation I (to sulfur globules) 1 / 1
sulfoacetaldehyde degradation III 1 / 1
thiosulfate disproportionation IV (rhodanese) 1 / 1
L-citrulline biosynthesis 6 / 8
UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) 6 / 8
UDP-N-acetylmuramoyl-pentapeptide biosynthesis III (meso-diaminopimelate containing) 6 / 8
pyrimidine deoxyribonucleotides biosynthesis from CTP 6 / 8
superpathway of NAD/NADP - NADH/NADPH interconversion (yeast) 6 / 8
superpathway of heme b biosynthesis from glycine 6 / 8
superpathway of polyamine biosynthesis II 6 / 8
superpathway of N-acetylneuraminate degradation 16 / 22
palmitate biosynthesis III 21 / 29
(2S)-ethylmalonyl-CoA biosynthesis 3 / 4
L-histidine degradation I 3 / 4
NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde 3 / 4
adenosine deoxyribonucleotides de novo biosynthesis II 3 / 4
aerobic respiration I (cytochrome c) 3 / 4
assimilatory sulfate reduction IV 3 / 4
cardiolipin and phosphatidylethanolamine biosynthesis (Xanthomonas) 3 / 4
coenzyme A biosynthesis III (archaea) 3 / 4
dipicolinate biosynthesis 3 / 4
dipyrromethane cofactor biosynthesis 3 / 4
formaldehyde oxidation VII (THF pathway) 3 / 4
guanosine deoxyribonucleotides de novo biosynthesis II 3 / 4
heme b biosynthesis I (aerobic) 3 / 4
heme b biosynthesis II (oxygen-independent) 3 / 4
heme b biosynthesis V (aerobic) 3 / 4
homocysteine and cysteine interconversion 3 / 4
mannitol degradation II 3 / 4
phytol degradation 3 / 4
pyruvate fermentation to acetate and (S)-lactate I 3 / 4
sucrose degradation III (sucrose invertase) 3 / 4
sucrose degradation IV (sucrose phosphorylase) 3 / 4
sulfide oxidation III (to sulfite) 3 / 4
superpathway of L-aspartate and L-asparagine biosynthesis 3 / 4
superpathway of L-serine and glycine biosynthesis I 3 / 4
tetrapyrrole biosynthesis II (from glycine) 3 / 4
glycolysis VI (from fructose) 8 / 11
superpathway of hexitol degradation (bacteria) 13 / 18
L-Nδ-acetylornithine biosynthesis 5 / 7
L-glutamate and L-glutamine biosynthesis 5 / 7
UDP-N-acetyl-D-galactosamine biosynthesis II 5 / 7
UTP and CTP dephosphorylation I 5 / 7
acetyl-CoA fermentation to butanoate 5 / 7
pyrimidine deoxyribonucleotides de novo biosynthesis II 5 / 7
peptidoglycan recycling I 10 / 14
β-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation 2 / 3
4-methylphenyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP 2 / 3
5'-deoxyadenosine degradation I 2 / 3
6-hydroxymethyl-dihydropterin diphosphate biosynthesis IV (Plasmodium) 2 / 3
S-adenosyl-L-methionine salvage II 2 / 3
D-serine degradation 2 / 3
D-sorbitol degradation I 2 / 3
GDP-α-D-glucose biosynthesis 2 / 3
L-citrulline degradation 2 / 3
L-cysteine biosynthesis IX (Trichomonas vaginalis) 2 / 3
L-isoleucine biosynthesis V 2 / 3
L-isoleucine degradation II 2 / 3
L-leucine degradation III 2 / 3
L-methionine degradation I (to L-homocysteine) 2 / 3
L-methionine degradation II 2 / 3
L-phenylalanine degradation V 2 / 3
L-proline degradation I 2 / 3
L-proline degradation II (reductive Stickland reaction) 2 / 3
L-serine biosynthesis I 2 / 3
L-threonine degradation III (to methylglyoxal) 2 / 3
L-tryptophan degradation I (via anthranilate) 2 / 3
L-tryptophan degradation II (via pyruvate) 2 / 3
L-valine degradation II 2 / 3
NAD salvage pathway III (to nicotinamide riboside) 2 / 3
adenine salvage 2 / 3
aerobic respiration III (alternative oxidase pathway) 2 / 3
autoinducer CAI-1 biosynthesis 2 / 3
cardiolipin biosynthesis I 2 / 3
cardiolipin biosynthesis III 2 / 3
choline-O-sulfate degradation 2 / 3
cyanate degradation 2 / 3
ethanol degradation III 2 / 3
formate assimilation into 5,10-methylenetetrahydrofolate 2 / 3
gallate biosynthesis 2 / 3
gentisate degradation I 2 / 3
glutathione-peroxide redox reactions 2 / 3
glycine betaine biosynthesis III (plants) 2 / 3
hypotaurine degradation 2 / 3
lipoate biosynthesis and incorporation III (Bacillus) 2 / 3
lipoate biosynthesis and incorporation V (mammals) 2 / 3
methylglyoxal degradation I 2 / 3
methylglyoxal degradation IV 2 / 3
methylglyoxal degradation V 2 / 3
methylglyoxal degradation VIII 2 / 3
neolinustatin bioactivation 2 / 3
nitric oxide biosynthesis II (mammals) 2 / 3
oleate biosynthesis III (cyanobacteria) 2 / 3
ophthalmate biosynthesis 2 / 3
phenyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP 2 / 3
polyhydroxybutanoate biosynthesis 2 / 3
propanoyl CoA degradation I 2 / 3
pyrimidine deoxyribonucleosides degradation 2 / 3
pyrimidine deoxyribonucleotides dephosphorylation 2 / 3
pyruvate fermentation to (R)-acetoin I 2 / 3
pyruvate fermentation to (S)-acetoin 2 / 3
pyruvate fermentation to acetate I 2 / 3
pyruvate fermentation to acetate IV 2 / 3
pyruvate fermentation to acetate VI 2 / 3
pyruvate fermentation to acetate VII 2 / 3
tetrahydrofolate biosynthesis II 2 / 3
thiamine diphosphate salvage V 2 / 3
trehalose degradation V 2 / 3
urea degradation I 2 / 3
vancomycin resistance I 2 / 3
vancomycin resistance II 2 / 3
glycolysis V (Pyrococcus) 7 / 10
isoprene biosynthesis I 7 / 10
superpathway of pyrimidine ribonucleosides salvage 7 / 10
superpathway of arginine and polyamine biosynthesis 12 / 17
γ-glutamyl cycle 4 / 6
L-histidine degradation III 4 / 6
L-isoleucine biosynthesis IV 4 / 6
L-isoleucine degradation I 4 / 6
L-methionine biosynthesis II 4 / 6
NAD de novo biosynthesis III 4 / 6
NAD de novo biosynthesis IV (anaerobic) 4 / 6
UDP-N-acetyl-D-glucosamine biosynthesis II 4 / 6
autoinducer AI-2 biosynthesis II (Vibrio) 4 / 6
dTDP-α-D-ravidosamine and dTDP-4-acetyl-α-D-ravidosamine biosynthesis 4 / 6
hydrogen sulfide biosynthesis II (mammalian) 4 / 6
purine deoxyribonucleosides salvage 4 / 6
pyruvate fermentation to butanol II (engineered) 4 / 6
stearate biosynthesis IV 4 / 6
superpathway of L-cysteine biosynthesis (fungi) 4 / 6
superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis 4 / 6
superpathway of heme b biosynthesis from uroporphyrinogen-III 4 / 6
thiazole component of thiamine diphosphate biosynthesis I 4 / 6
Calvin-Benson-Bassham cycle 9 / 13
superpathway of cardiolipin biosynthesis (bacteria) 9 / 13
anteiso-branched-chain fatty acid biosynthesis 24 / 34
even iso-branched-chain fatty acid biosynthesis 24 / 34
odd iso-branched-chain fatty acid biosynthesis 24 / 34
γ-linolenate biosynthesis II (animals) 1 / 2
(1,4)-β-D-xylan degradation 1 / 2
(3R)-linalool biosynthesis 1 / 2
(3S)-linalool biosynthesis 1 / 2
(Kdo)2-lipid A biosynthesis (E. coli) 1 / 2
10,13-epoxy-11-methyl-octadecadienoate biosynthesis 1 / 2
4-aminobenzoate biosynthesis II 1 / 2
8-amino-7-oxononanoate biosynthesis II 1 / 2
8-amino-7-oxononanoate biosynthesis III 1 / 2
S-methyl-5'-thioadenosine degradation III 1 / 2
Salmonella typhimurium LT2 lipopolysaccharide biosynthesis (final steps) 1 / 2
myo-inositol biosynthesis 1 / 2
D-mannose degradation I 1 / 2
GDP-6-deoxy-D-talose biosynthesis 1 / 2
GDP-D-perosamine biosynthesis 1 / 2
GDP-D-rhamnose biosynthesis 1 / 2
Kdo transfer to lipid IVA (Haemophilus) 1 / 2
Kdo transfer to lipid IVA (Vibrio cholerae serogroup O1 El Tor) 1 / 2
L-alanine degradation V (oxidative Stickland reaction) 1 / 2
L-arginine degradation III (arginine decarboxylase/agmatinase pathway) 1 / 2
L-arginine degradation VII (arginase 3 pathway) 1 / 2
L-canavanine degradation I 1 / 2
L-glutamate degradation II 1 / 2
L-homocysteine biosynthesis 1 / 2
L-lactaldehyde degradation (aerobic) 1 / 2
L-threonine degradation IV 1 / 2
L-threonine degradation V 1 / 2
L-tryptophan degradation IV (via indole-3-lactate) 1 / 2
L-tyrosine degradation II 1 / 2
N6-L-threonylcarbamoyladenosine37-modified tRNA biosynthesis 1 / 2
NAD phosphorylation and transhydrogenation 1 / 2
NADH to cytochrome bd oxidase electron transfer II 1 / 2
NADH to cytochrome bo oxidase electron transfer I 1 / 2
NADH to nitrate electron transfer 1 / 2
UDP-α-D-galactofuranose biosynthesis 1 / 2
UDP-N-acetyl-α-D-galactosaminuronate biosynthesis 1 / 2
acetoacetate degradation (to acetyl CoA) 1 / 2
acrylonitrile degradation I 1 / 2
adenine and adenosine salvage I 1 / 2
adenosylcobinamide-GDP salvage from assorted adenosylcobamides 1 / 2
alkylnitronates degradation 1 / 2
aminopropanol phosphate biosynthesis I 1 / 2
arsenate detoxification III 1 / 2
arsenite to oxygen electron transfer 1 / 2
aspartame degradation 1 / 2
atromentin biosynthesis 1 / 2
benzoate degradation I (aerobic) 1 / 2
cytidylyl molybdenum cofactor sulfurylation 1 / 2
diethylphosphate degradation 1 / 2
ethanol degradation I 1 / 2
glutathione degradation (DUG pathway) 1 / 2
glycerol-3-phosphate shuttle 1 / 2
glycerophosphodiester degradation 1 / 2
glycine degradation (reductive Stickland reaction) 1 / 2
guanine and guanosine salvage I 1 / 2
homoglutathione biosynthesis 1 / 2
indole-3-acetate biosynthesis III (bacteria) 1 / 2
indole-3-acetate biosynthesis IV (bacteria) 1 / 2
kojibiose degradation 1 / 2
linalool biosynthesis I 1 / 2
linamarin degradation 1 / 2
linoleate biosynthesis II (animals) 1 / 2
lipoate salvage I 1 / 2
lotaustralin degradation 1 / 2
menaquinol-10 biosynthesis 1 / 2
menaquinol-11 biosynthesis 1 / 2
menaquinol-12 biosynthesis 1 / 2
menaquinol-13 biosynthesis 1 / 2
menaquinol-7 biosynthesis 1 / 2
methanol oxidation to formaldehyde IV 1 / 2
methyl indole-3-acetate interconversion 1 / 2
mevalonate degradation 1 / 2
nitrate reduction III (dissimilatory) 1 / 2
nitrate reduction IX (dissimilatory) 1 / 2
nitrate reduction VIII (dissimilatory) 1 / 2
nitrate reduction VIIIb (dissimilatory) 1 / 2
oleate β-oxidation (thioesterase-dependent, yeast) 1 / 2
oleate biosynthesis II (animals and fungi) 1 / 2
palmitoleate biosynthesis II (plants and bacteria) 1 / 2
palmitoleate biosynthesis III (cyanobacteria) 1 / 2
palmitoleate biosynthesis IV (fungi and animals) 1 / 2
periplasmic disulfide bond reduction 1 / 2
phenylmercury acetate degradation 1 / 2
phosphatidylcholine biosynthesis VII 1 / 2
phosphatidylcholine resynthesis via glycerophosphocholine 1 / 2
phospholipid remodeling (phosphatidate, yeast) 1 / 2
pseudouridine degradation 1 / 2
putrescine biosynthesis I 1 / 2
putrescine biosynthesis III 1 / 2
pyrimidine nucleobases salvage II 1 / 2
pyrimidine ribonucleosides degradation 1 / 2
pyrimidine ribonucleosides salvage II 1 / 2
pyruvate fermentation to (R)-acetoin II 1 / 2
pyruvate fermentation to acetate VIII 1 / 2
pyruvate fermentation to ethanol II 1 / 2
pyruvate to cytochrome bd oxidase electron transfer 1 / 2
ribose phosphorylation 1 / 2
spermine biosynthesis 1 / 2
sterculate biosynthesis 1 / 2
succinate to cytochrome bo oxidase electron transfer 1 / 2
sulfoacetaldehyde degradation I 1 / 2
tetrahydropteridine recycling 1 / 2
thiamine diphosphate salvage I 1 / 2
thioredoxin pathway 1 / 2
trehalose degradation I (low osmolarity) 1 / 2
trehalose degradation III 1 / 2
xanthine and xanthosine salvage 1 / 2
1,3-propanediol biosynthesis (engineered) 6 / 9
Entner-Doudoroff pathway III (semi-phosphorylative) 6 / 9
TCA cycle VI (Helicobacter) 6 / 9
chitin biosynthesis 6 / 9
superpathway of S-adenosyl-L-methionine biosynthesis 6 / 9
superpathway of L-methionine biosynthesis (transsulfuration) 6 / 9
(S)-propane-1,2-diol degradation 3 / 5
(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered) 3 / 5
1,5-anhydrofructose degradation 3 / 5
3-hydroxy-4-methyl-anthranilate biosynthesis II 3 / 5
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I 3 / 5
6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) 3 / 5
trans-4-hydroxy-L-proline degradation I 3 / 5
CDP-diacylglycerol biosynthesis III 3 / 5
D-galactose degradation I (Leloir pathway) 3 / 5
GDP-L-colitose biosynthesis 3 / 5
L-arginine degradation XIII (reductive Stickland reaction) 3 / 5
acetylene degradation (anaerobic) 3 / 5
adipate biosynthesis 3 / 5
autoinducer AI-2 biosynthesis I 3 / 5
biotin biosynthesis from 8-amino-7-oxononanoate III 3 / 5
cyanuric acid degradation II 3 / 5
dTDP-4-O-demethyl-β-L-noviose biosynthesis 3 / 5
ergothioneine biosynthesis II (fungi) 3 / 5
ethanolamine utilization 3 / 5
fatty acid β-oxidation II (plant peroxisome) 3 / 5
fatty acid β-oxidation IV (unsaturated, even number) 3 / 5
glucose and glucose-1-phosphate degradation 3 / 5
glutaryl-CoA degradation 3 / 5
ketogenesis 3 / 5
mitochondrial NADPH production (yeast) 3 / 5
phosphatidate biosynthesis (yeast) 3 / 5
protein S-nitrosylation and denitrosylation 3 / 5
queuosine biosynthesis III (queuosine salvage) 3 / 5
superpathway of plastoquinol biosynthesis 3 / 5
superpathway of sulfide oxidation (Starkeya novella) 3 / 5
urea cycle 3 / 5
chorismate biosynthesis II (archaea) 8 / 12
superpathway of L-citrulline metabolism 8 / 12
adenosine nucleotides degradation I 5 / 8
superpathway of L-homoserine and L-methionine biosynthesis 5 / 8
ubiquinol-8 biosynthesis (early decarboxylation) 5 / 8
peptidoglycan biosynthesis III (mycobacteria) 10 / 15
2-amino-3-carboxymuconate semialdehyde degradation to 2-hydroxypentadienoate 2 / 4
2-deoxy-D-glucose 6-phosphate degradation 2 / 4
2-keto-L-gulonate biosynthesis 2 / 4
2-oxobutanoate degradation I 2 / 4
S-adenosyl-L-methionine salvage I 2 / 4
all-trans-farnesol biosynthesis 2 / 4
erythro-tetrahydrobiopterin biosynthesis I 2 / 4
threo-tetrahydrobiopterin biosynthesis 2 / 4
D-galactosamine and N-acetyl-D-galactosamine degradation 2 / 4
L-arginine degradation V (arginine deiminase pathway) 2 / 4
L-cysteine biosynthesis VII (from S-sulfo-L-cysteine) 2 / 4
L-methionine biosynthesis III 2 / 4
L-methionine biosynthesis IV 2 / 4
L-phenylalanine degradation III 2 / 4
L-tyrosine biosynthesis III 2 / 4
L-tyrosine degradation III 2 / 4
adenosylcobalamin biosynthesis from adenosylcobinamide-GDP II 2 / 4
aerobic respiration II (cytochrome c) (yeast) 2 / 4
aminopropanol phosphate biosynthesis II 2 / 4
arsenic detoxification (bacteria) 2 / 4
canavanine biosynthesis 2 / 4
chitin deacetylation 2 / 4
choline degradation IV 2 / 4
dTDP-β-D-fucofuranose biosynthesis 2 / 4
dTDP-6-deoxy-α-D-allose biosynthesis 2 / 4
dTDP-N-acetylthomosamine biosynthesis 2 / 4
dTDP-N-acetylviosamine biosynthesis 2 / 4
diphenyl ethers degradation 2 / 4
fatty acid α-oxidation I (plants) 2 / 4
fatty acid biosynthesis initiation (mitochondria) 2 / 4
glycerol and glycerophosphodiester degradation 2 / 4
glycolate and glyoxylate degradation I 2 / 4
guanosine nucleotides degradation I 2 / 4
guanosine nucleotides degradation II 2 / 4
heme a biosynthesis 2 / 4
inosine 5'-phosphate degradation 2 / 4
linustatin bioactivation 2 / 4
methyl phomopsenoate biosynthesis 2 / 4
monoacylglycerol metabolism (yeast) 2 / 4
phosphatidylcholine acyl editing 2 / 4
phospholipid remodeling (phosphatidylethanolamine, yeast) 2 / 4
phosphopantothenate biosynthesis III (archaea) 2 / 4
preQ0 biosynthesis 2 / 4
protocatechuate degradation II (ortho-cleavage pathway) 2 / 4
pyruvate fermentation to acetate and lactate II 2 / 4
spermidine biosynthesis II 2 / 4
spermidine biosynthesis III 2 / 4
superpathway of putrescine biosynthesis 2 / 4
C4 photosynthetic carbon assimilation cycle, NAD-ME type 7 / 11
L-methionine salvage cycle II (plants) 7 / 11
pyruvate fermentation to hexanol (engineered) 7 / 11
ethene biosynthesis V (engineered) 17 / 25
tetradecanoate biosynthesis (mitochondria) 17 / 25
C4 photosynthetic carbon assimilation cycle, NADP-ME type 4 / 7
CMP-8-amino-3,8-dideoxy-D-manno-octulosonate biosynthesis 4 / 7
L-cysteine biosynthesis VI (reverse transsulfuration) 4 / 7
L-isoleucine biosynthesis III 4 / 7
drosopterin and aurodrosopterin biosynthesis 4 / 7
ergothioneine biosynthesis I (bacteria) 4 / 7
glycine betaine degradation III 4 / 7
lipoate biosynthesis and incorporation IV (yeast) 4 / 7
2-methyl-branched fatty acid β-oxidation 9 / 14
superpathway of NAD biosynthesis in eukaryotes 9 / 14
(R)-cysteate degradation 1 / 3
2-chloroacrylate degradation I 1 / 3
2-deoxy-D-ribose degradation I 1 / 3
5,6-dimethylbenzimidazole biosynthesis I (aerobic) 1 / 3
bis(guanylyl molybdopterin) cofactor sulfurylation 1 / 3
CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis 1 / 3
D-myo-inositol (1,4,5)-trisphosphate degradation 1 / 3
D-galactarate degradation II 1 / 3
D-galactose detoxification 1 / 3
D-glucarate degradation II 1 / 3
D-glucosaminate degradation 1 / 3
D-sorbitol biosynthesis I 1 / 3
GDP-N-acetyl-α-D-perosamine biosynthesis 1 / 3
GDP-N-formyl-α-D-perosamine biosynthesis 1 / 3
GDP-L-fucose biosynthesis I (from GDP-D-mannose) 1 / 3
GDP-mycosamine biosynthesis 1 / 3
L-arginine degradation X (arginine monooxygenase pathway) 1 / 3
L-aspartate degradation II (aerobic) 1 / 3
L-aspartate degradation III (anaerobic) 1 / 3
L-carnitine degradation II 1 / 3
L-isoleucine degradation III (oxidative Stickland reaction) 1 / 3
L-leucine degradation V (oxidative Stickland reaction) 1 / 3
L-lyxonate degradation 1 / 3
L-methionine degradation III 1 / 3
L-methionine salvage from L-homocysteine 1 / 3
L-phenylalanine degradation II (anaerobic) 1 / 3
L-selenocysteine biosynthesis I (bacteria) 1 / 3
L-tyrosine degradation IV (to 4-methylphenol) 1 / 3
L-valine degradation III (oxidative Stickland reaction) 1 / 3
NAD phosphorylation and dephosphorylation 1 / 3
UTP and CTP dephosphorylation II 1 / 3
aldoxime degradation 1 / 3
alkane biosynthesis II 1 / 3
aminopropylcadaverine biosynthesis 1 / 3
ammonia oxidation II (anaerobic) 1 / 3
arsenite to oxygen electron transfer (via azurin) 1 / 3
assimilatory sulfate reduction II 1 / 3
cellulose degradation II (fungi) 1 / 3
conversion of succinate to propanoate 1 / 3
ethene biosynthesis I (plants) 1 / 3
ethene biosynthesis IV (engineered) 1 / 3
fatty acid biosynthesis initiation (type I) 1 / 3
glycerol degradation I 1 / 3
glycolate and glyoxylate degradation III 1 / 3
histamine degradation 1 / 3
indole-3-acetate biosynthesis VI (bacteria) 1 / 3
lipoate biosynthesis and incorporation II 1 / 3
mannitol biosynthesis 1 / 3
microcin B17 biosynthesis 1 / 3
molybdenum cofactor biosynthesis 1 / 3
nitrite-dependent anaerobic methane oxidation 1 / 3
oleate β-oxidation (reductase-dependent, yeast) 1 / 3
oleate biosynthesis I (plants) 1 / 3
ophiobolin F biosynthesis 1 / 3
phosphatidylcholine biosynthesis V 1 / 3
phosphopantothenate biosynthesis II 1 / 3
plastoquinol-9 biosynthesis I 1 / 3
plaunotol biosynthesis 1 / 3
pyrimidine ribonucleosides salvage I 1 / 3
pyruvate fermentation to acetate and alanine 1 / 3
pyruvate fermentation to ethanol I 1 / 3
pyruvate fermentation to ethanol III 1 / 3
quinate degradation I 1 / 3
quinate degradation II 1 / 3
starch degradation I 1 / 3
sucrose biosynthesis III 1 / 3
sucrose degradation I (sucrose phosphotransferase) 1 / 3
sulfite oxidation III 1 / 3
sulfolactate degradation III 1 / 3
superpathway of acrylonitrile degradation 1 / 3
superpathway of guanine and guanosine salvage 1 / 3
superpathway of linalool biosynthesis 1 / 3
taurine biosynthesis III 1 / 3
thiamine diphosphate biosynthesis III (Staphylococcus) 1 / 3
thiamine diphosphate biosynthesis IV (eukaryotes) 1 / 3
triacylglycerol degradation 1 / 3
5,6-dehydrokavain biosynthesis (engineered) 6 / 10
anaerobic energy metabolism (invertebrates, mitochondrial) 6 / 10
superpathway of coenzyme A biosynthesis II (plants) 6 / 10
superpathway of sulfide oxidation (Acidithiobacillus ferrooxidans) 6 / 10
peptidoglycan biosynthesis II (staphylococci) 11 / 17
peptidoglycan biosynthesis IV (Enterococcus faecium) 11 / 17
2-methylcitrate cycle II 3 / 6
3-methyl-branched fatty acid α-oxidation 3 / 6
5-nitroanthranilate degradation 3 / 6
L-arabinose degradation III 3 / 6
NAD(P)/NADPH interconversion 3 / 6
arsenate detoxification I 3 / 6
dTDP-L-daunosamine biosynthesis 3 / 6
dTDP-sibirosamine biosynthesis 3 / 6
formaldehyde oxidation I 3 / 6
methyl ketone biosynthesis (engineered) 3 / 6
nitrifier denitrification 3 / 6
propanoate fermentation to 2-methylbutanoate 3 / 6
superpathway of guanosine nucleotides degradation (plants) 3 / 6
folate transformations I 8 / 13
1-butanol autotrophic biosynthesis (engineered) 18 / 27
photorespiration I 5 / 9
photorespiration III 5 / 9
reductive glycine pathway of autotrophic CO2 fixation 5 / 9
superpathway of Clostridium acetobutylicum acidogenic fermentation 5 / 9
valproate β-oxidation 5 / 9
2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA 2 / 5
4-chlorocatechol degradation 2 / 5
4-hydroxy-2(1H)-quinolone biosynthesis 2 / 5
4-hydroxybenzoate biosynthesis III (plants) 2 / 5
N-(1-deoxy-D-fructos-1-yl)-L-asparagine degradation 2 / 5
N-acetyl-D-galactosamine degradation 2 / 5
D-glucuronate degradation II 2 / 5
Kdo transfer to lipid IVA (Chlamydia) 2 / 5
L-methionine biosynthesis I 2 / 5
biphenyl degradation 2 / 5
coumarin biosynthesis (via 2-coumarate) 2 / 5
cyanuric acid degradation I 2 / 5
dTDP-α-D-mycaminose biosynthesis 2 / 5
dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis 2 / 5
ectoine biosynthesis 2 / 5
fatty acid β-oxidation V (unsaturated, odd number, di-isomerase-dependent) 2 / 5
felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis 2 / 5
galactitol degradation 2 / 5
glucose degradation (oxidative) 2 / 5
glucosylglycerol biosynthesis 2 / 5
lactate biosynthesis (archaea) 2 / 5
mannitol cycle 2 / 5
octane oxidation 2 / 5
selenate reduction 2 / 5
seleno-amino acid biosynthesis (plants) 2 / 5
sucrose degradation V (sucrose α-glucosidase) 2 / 5
sulfide oxidation IV (mitochondria) 2 / 5
superpathway of (R,R)-butanediol biosynthesis 2 / 5
uracil degradation III 2 / 5
purine nucleotides degradation I (plants) 7 / 12
superpathway of pyridoxal 5'-phosphate biosynthesis and salvage 7 / 12
photosynthetic 3-hydroxybutanoate biosynthesis (engineered) 17 / 26
L-arabinose degradation IV 4 / 8
L-isoleucine biosynthesis II 4 / 8
L-mimosine degradation 4 / 8
cobalamin salvage (eukaryotic) 4 / 8
glycine betaine degradation I 4 / 8
sucrose biosynthesis II 4 / 8
superpathway of methylglyoxal degradation 4 / 8
superpathway of polyamine biosynthesis I 4 / 8
L-tryptophan degradation III (eukaryotic) 9 / 15
1,2-dichloroethane degradation 1 / 4
2'-deoxymugineic acid phytosiderophore biosynthesis 1 / 4
2-aminophenol degradation 1 / 4
3,3'-disulfanediyldipropannoate degradation 1 / 4
4-hydroxy-2-nonenal detoxification 1 / 4
4-hydroxy-3-prenylbenzoate biosynthesis 1 / 4
5'-deoxyadenosine degradation II 1 / 4
6-hydroxymethyl-dihydropterin diphosphate biosynthesis V (Pyrococcus) 1 / 4
7-(3-amino-3-carboxypropyl)-wyosine biosynthesis 1 / 4
D-glucarate degradation I 1 / 4
N-3-oxalyl-L-2,3-diaminopropanoate biosynthesis 1 / 4
CMP-2-keto-3-deoxy-D-glycero-D-galacto-nononate biosynthesis 1 / 4
D-fructuronate degradation 1 / 4
D-galactarate degradation I 1 / 4
GABA shunt II 1 / 4
L-asparagine biosynthesis III (tRNA-dependent) 1 / 4
L-phenylalanine biosynthesis II 1 / 4
L-selenocysteine biosynthesis II (archaea and eukaryotes) 1 / 4
L-serine biosynthesis II 1 / 4
L-tryptophan degradation VIII (to tryptophol) 1 / 4
L-tryptophan degradation X (mammalian, via tryptamine) 1 / 4
L-tyrosine biosynthesis II 1 / 4
NADPH to cytochrome c oxidase via plastocyanin (thylakoid membrane) 1 / 4
acridone alkaloid biosynthesis 1 / 4
adenine and adenosine salvage III 1 / 4
catechol degradation to β-ketoadipate 1 / 4
cytidine-5'-diphosphate-glycerol biosynthesis 1 / 4
dimethylsulfoniopropanoate biosynthesis III (algae and phytoplankton) 1 / 4
ethene biosynthesis II (microbes) 1 / 4
fatty acid biosynthesis initiation (plant mitochondria) 1 / 4
ferulate and sinapate biosynthesis 1 / 4
glutaminyl-tRNAgln biosynthesis via transamidation 1 / 4
glycine betaine degradation II (mammalian) 1 / 4
glycogen biosynthesis I (from ADP-D-Glucose) 1 / 4
guanosine nucleotides degradation III 1 / 4
ipsdienol biosynthesis 1 / 4
lipoate salvage II 1 / 4
long chain fatty acid ester synthesis (engineered) 1 / 4
methylwyosine biosynthesis 1 / 4
muropeptide degradation 1 / 4
oleate β-oxidation (isomerase-dependent, yeast) 1 / 4
photosynthesis light reactions 1 / 4
polybrominated phenols biosynthesis 1 / 4
putrescine degradation III 1 / 4
salidroside biosynthesis 1 / 4
starch degradation III 1 / 4
starch degradation V 1 / 4
sucrose degradation VII (sucrose 3-dehydrogenase) 1 / 4
sulfolactate degradation II 1 / 4
tRNA-uridine 2-thiolation (mammalian mitochondria) 1 / 4
tRNA-uridine 2-thiolation (yeast mitochondria) 1 / 4
taurine biosynthesis II 1 / 4
tetrahydromonapterin biosynthesis 1 / 4
vitamin K-epoxide cycle 1 / 4
wax esters biosynthesis II 1 / 4
NAD salvage (plants) 6 / 11
reductive TCA cycle I 6 / 11
2-nitrobenzoate degradation I 3 / 7
3-dehydroquinate biosynthesis II (archaea) 3 / 7
4,5-dichlorocatechol degradation 3 / 7
L-ascorbate biosynthesis VIII (engineered pathway) 3 / 7
L-glucose degradation 3 / 7
dTDP-β-L-digitoxose biosynthesis 3 / 7
dTDP-β-L-olivose biosynthesis 3 / 7
diacylglycerol and triacylglycerol biosynthesis 3 / 7
factor 430 biosynthesis 3 / 7
fatty acid β-oxidation VI (mammalian peroxisome) 3 / 7
incomplete reductive TCA cycle 3 / 7
pyruvate fermentation to butanoate 3 / 7
pyruvate fermentation to propanoate I 3 / 7
serotonin degradation 3 / 7
superpathway of glycol metabolism and degradation 3 / 7
superpathway of thiamine diphosphate biosynthesis III (eukaryotes) 3 / 7
thiamine diphosphate salvage IV (yeast) 3 / 7
toxoflavin biosynthesis 3 / 7
Arg/N-end rule pathway (eukaryotic) 8 / 14
C4 photosynthetic carbon assimilation cycle, PEPCK type 8 / 14
3-phenylpropanoate degradation 5 / 10
L-glutamate degradation V (via hydroxyglutarate) 5 / 10
flavin biosynthesis II (archaea) 5 / 10
peptidoglycan recycling II 5 / 10
photorespiration II 5 / 10
oxygenic photosynthesis 10 / 17
peptidoglycan biosynthesis V (β-lactam resistance) 10 / 17
β-alanine biosynthesis II 2 / 6
1,2-propanediol biosynthesis from lactate (engineered) 2 / 6
3-hydroxy-4-methyl-anthranilate biosynthesis I 2 / 6
6-gingerol analog biosynthesis (engineered) 2 / 6
D-arabinose degradation III 2 / 6
D-cycloserine biosynthesis 2 / 6
Fe(II) oxidation 2 / 6
L-alanine degradation VI (reductive Stickland reaction) 2 / 6
L-arabinose degradation V 2 / 6
UDP-N-acetyl-D-galactosamine biosynthesis III 2 / 6
arsenic detoxification (plants) 2 / 6
bisabolene biosynthesis (engineered) 2 / 6
chitin degradation II (Vibrio) 2 / 6
dTDP-D-desosamine biosynthesis 2 / 6
glycogen degradation II 2 / 6
methanogenesis from acetate 2 / 6
methylgallate degradation 2 / 6
molybdopterin biosynthesis 2 / 6
norspermidine biosynthesis 2 / 6
palmitoyl ethanolamide biosynthesis 2 / 6
petroselinate biosynthesis 2 / 6
pyridoxal 5'-phosphate salvage I 2 / 6
superpathway of 2,3-butanediol biosynthesis 2 / 6
superpathway of N-acetylglucosamine, N-acetylmannosamine and N-acetylneuraminate degradation 2 / 6
superpathway of allantoin degradation in yeast 2 / 6
superpathway of photosynthetic hydrogen production 2 / 6
superpathway of pyrimidine deoxyribonucleosides degradation 2 / 6
superpathway of stearidonate biosynthesis (cyanobacteria) 2 / 6
superpathway of sulfolactate degradation 2 / 6
3-hydroxypropanoate cycle 7 / 13
formaldehyde assimilation I (serine pathway) 7 / 13
3,4,6-trichlorocatechol degradation 4 / 9
Entner-Doudoroff pathway II (non-phosphorylative) 4 / 9
superpathway of L-alanine fermentation (Stickland reaction) 4 / 9
superpathway of fermentation (Chlamydomonas reinhardtii) 4 / 9
glycerol degradation to butanol 9 / 16
3-chlorocatechol degradation I (ortho) 1 / 5
3-chlorocatechol degradation II (ortho) 1 / 5
4-deoxy-L-threo-hex-4-enopyranuronate degradation 1 / 5
4-hydroxybenzoate biosynthesis I (eukaryotes) 1 / 5
Escherichia coli serotype O:15 O antigen biosynthesis 1 / 5
S-methyl-5-thio-α-D-ribose 1-phosphate degradation II 1 / 5
S-methyl-5-thio-α-D-ribose 1-phosphate degradation III 1 / 5
Salmonella enterica serotype O:54 O antigen biosynthesis 1 / 5
cis-zeatin biosynthesis 1 / 5
CDP-6-deoxy-D-gulose biosynthesis 1 / 5
D-galacturonate degradation I 1 / 5
D-galacturonate degradation II 1 / 5
D-xylose degradation III 1 / 5
D-xylose degradation V 1 / 5
L-arginine degradation II (AST pathway) 1 / 5
L-ascorbate degradation IV 1 / 5
L-leucine degradation IV (reductive Stickland reaction) 1 / 5
L-lysine degradation XI 1 / 5
L-phenylalanine degradation VI (reductive Stickland reaction) 1 / 5
L-tryptophan degradation XIII (reductive Stickland reaction) 1 / 5
L-tyrosine degradation V (reductive Stickland reaction) 1 / 5
UDP-2,3-diacetamido-2,3-dideoxy-α-D-mannuronate biosynthesis 1 / 5
acrylate degradation I 1 / 5
adenosine nucleotides degradation II 1 / 5
benzoate biosynthesis III (CoA-dependent, non-β-oxidative) 1 / 5
dissimilatory sulfate reduction I (to hydrogen sufide)) 1 / 5
dopamine degradation 1 / 5
enterobacterial common antigen biosynthesis 1 / 5
ethylbenzene degradation (anaerobic) 1 / 5
fatty acid β-oxidation VII (yeast peroxisome) 1 / 5
ferrichrome A biosynthesis 1 / 5
heme b biosynthesis IV (Gram-positive bacteria) 1 / 5
isopropanol biosynthesis (engineered) 1 / 5
lactose degradation I 1 / 5
mono-trans, poly-cis decaprenyl phosphate biosynthesis 1 / 5
phenylethanol biosynthesis 1 / 5
phosphatidate metabolism, as a signaling molecule 1 / 5
plastoquinol-9 biosynthesis II 1 / 5
propanoyl-CoA degradation II 1 / 5
protein O-mannosylation II (mammals, core M1 and core M2) 1 / 5
protein O-mannosylation III (mammals, core M3) 1 / 5
pyruvate fermentation to acetone 1 / 5
superpathway of D-glucarate and D-galactarate degradation 1 / 5
superpathway of L-phenylalanine and L-tyrosine biosynthesis 1 / 5
superpathway of methylsalicylate metabolism 1 / 5
superpathway of pyrimidine ribonucleosides degradation 1 / 5
tRNA-uridine 2-thiolation (thermophilic bacteria) 1 / 5
L-tryptophan degradation IX 6 / 12
methylaspartate cycle 11 / 19
adenosylcobalamin biosynthesis II (aerobic) 21 / 33
3,5-dichlorocatechol degradation 3 / 8
L-valine degradation I 3 / 8
butanol and isobutanol biosynthesis (engineered) 3 / 8
chitin derivatives degradation 3 / 8
dTDP-β-L-4-epi-vancosamine biosynthesis 3 / 8
dTDP-β-L-megosamine biosynthesis 3 / 8
glutathione-mediated detoxification I 3 / 8
glycogen degradation I 3 / 8
ketogluconate metabolism 3 / 8
protocatechuate degradation I (meta-cleavage pathway) 3 / 8
pyruvate fermentation to butanol I 3 / 8
shinorine biosynthesis 3 / 8
stellatic acid biosynthesis 3 / 8
superpathway of atrazine degradation 3 / 8
thiamine diphosphate formation from pyrithiamine and oxythiamine (yeast) 3 / 8
ubiquinol-6 biosynthesis (late decarboxylation) 3 / 8
xyloglucan degradation II (exoglucanase) 3 / 8
(8E,10E)-dodeca-8,10-dienol biosynthesis 5 / 11
cytochrome c biogenesis (system I type) 5 / 11
3-hydroxypropanoate/4-hydroxybutanate cycle 10 / 18
β-(1,4)-mannan degradation 2 / 7
3,6-anhydro-α-L-galactopyranose degradation 2 / 7
6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (Methanocaldococcus) 2 / 7
D-xylose degradation IV 2 / 7
L-glutamate degradation XI (reductive Stickland reaction) 2 / 7
L-homomethionine biosynthesis 2 / 7
benzoyl-CoA degradation I (aerobic) 2 / 7
ceramide degradation by α-oxidation 2 / 7
chitin degradation III (Serratia) 2 / 7
cremeomycin biosynthesis 2 / 7
dTDP-β-L-mycarose biosynthesis 2 / 7
glyphosate degradation III 2 / 7
limonene degradation IV (anaerobic) 2 / 7
lipoprotein posttranslational modification (Gram-negative bacteria) 2 / 7
stachyose degradation 2 / 7
stigma estolide biosynthesis 2 / 7
superpathway of β-D-glucuronosides degradation 2 / 7
ureide biosynthesis 2 / 7
superpathway of GDP-mannose-derived O-antigen building blocks biosynthesis 7 / 14
9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast) 4 / 10
ephedrine biosynthesis 4 / 10
sphingosine and sphingosine-1-phosphate metabolism 4 / 10
superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate) 4 / 10
α-tomatine degradation 1 / 6
10-trans-heptadecenoyl-CoA degradation (MFE-dependent, yeast) 1 / 6
4-ethylphenol degradation (anaerobic) 1 / 6
Escherichia coli serotype O:149/Shigella boydii serotype O1 O antigen biosynthesis 1 / 6
Escherichia coli serotype O:177 O antigen biosynthesis 1 / 6
Escherichia coli serotype O:50 O antigen biosynthesis 1 / 6
Escherichia coli serotype O:56 O antigen biosynthesis 1 / 6
Escherichia coli serotype O:77/Salmonella enterica serotype O:6,14 O antigen biosynthesis 1 / 6
Salmonella enterica serotype O:13 O antigen biosynthesis 1 / 6
DIBOA-glucoside biosynthesis 1 / 6
adlupulone and adhumulone biosynthesis 1 / 6
alkane oxidation 1 / 6
candicidin biosynthesis 1 / 6
catechol degradation III (ortho-cleavage pathway) 1 / 6
coenzyme M biosynthesis II 1 / 6
colupulone and cohumulone biosynthesis 1 / 6
cyanophycin metabolism 1 / 6
leukotriene biosynthesis 1 / 6
lupulone and humulone biosynthesis 1 / 6
nicotinate degradation I 1 / 6
paspaline biosynthesis 1 / 6
procollagen hydroxylation and glycosylation 1 / 6
stearate biosynthesis I (animals) 1 / 6
superpathway of D-myo-inositol (1,4,5)-trisphosphate metabolism 1 / 6
superpathway of sulfur metabolism (Desulfocapsa sulfoexigens) 1 / 6
superpathway of taurine degradation 1 / 6
superpathway of thiosulfate metabolism (Desulfovibrio sulfodismutans) 1 / 6
wybutosine biosynthesis 1 / 6
1,4-dichlorobenzene degradation 3 / 9
L-arginine biosynthesis IV (archaea) 3 / 9
UDP-sugars interconversion 3 / 9
benzoate biosynthesis I (CoA-dependent, β-oxidative) 3 / 9
dTDP-α-D-forosamine biosynthesis 3 / 9
dTDP-α-D-olivose, dTDP-α-D-oliose and dTDP-α-D-mycarose biosynthesis 3 / 9
jadomycin biosynthesis 3 / 9
ubiquinol-6 biosynthesis from 4-aminobenzoate (yeast) 3 / 9
superpathway of L-methionine salvage and degradation 8 / 16
L-tryptophan degradation XII (Geobacillus) 5 / 12
reductive TCA cycle II 5 / 12
(aminomethyl)phosphonate degradation 2 / 8
2-allylmalonyl-CoA biosynthesis 2 / 8
2-deoxy-D-ribose degradation II 2 / 8
2-methylpropene degradation 2 / 8
4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis II 2 / 8
4-hydroxyphenylacetate degradation 2 / 8
L-rhamnose degradation II 2 / 8
anandamide biosynthesis II 2 / 8
grixazone biosynthesis 2 / 8
lactate fermentation to acetate, CO2 and hydrogen (Desulfovibrionales) 2 / 8
sorgoleone biosynthesis 2 / 8
superpathway of polyamine biosynthesis III 2 / 8
ubiquinol-10 biosynthesis (early decarboxylation) 2 / 8
ubiquinol-7 biosynthesis (early decarboxylation) 2 / 8
ubiquinol-7 biosynthesis (late decarboxylation) 2 / 8
ubiquinol-9 biosynthesis (early decarboxylation) 2 / 8
ubiquinol-9 biosynthesis (late decarboxylation) 2 / 8
vanchrobactin biosynthesis 2 / 8
arabidopyrone biosynthesis 4 / 11
purine nucleotides degradation II (aerobic) 4 / 11
superpathway of candicidin biosynthesis 4 / 11
superpathway of ubiquinol-6 biosynthesis (late decarboxylation) 4 / 11
superpathway of Kdo2-lipid A biosynthesis 14 / 25
2-carboxy-1,4-naphthoquinol biosynthesis 1 / 7
4-aminobutanoate degradation V 1 / 7
4-methylcatechol degradation (ortho cleavage) 1 / 7
Escherichia coli serotype O:111/Salmonella enterica serotype O:35 O antigen biosynthesis 1 / 7
Escherichia coli serotype O:152 O antigen biosynthesis 1 / 7
Escherichia coli serotype O:157/Salmonella enterica serotype O:30 O antigen biosynthesis 1 / 7
Escherichia coli serotype O:1B/Salmonella enterica serotype O:42 O antigen biosynthesis 1 / 7
Escherichia coli serotype O:2 O antigen biosynthesis 1 / 7
Escherichia coli serotype O:7 O antigen biosynthesis 1 / 7
Escherichia coli serotype O:71/Salmonella enterica serotype O:28ac O antigen biosynthesis 1 / 7
Escherichia coli serotype O:85/Salmonella enterica serotype O:17 O antigen biosynthesis 1 / 7
Salmonella enterica serotype O:18 O antigen biosynthesis 1 / 7
Salmonella enterica serotype O:39 O antigen biosynthesis 1 / 7
Salmonella enterica serotype O:6,7 O antigen biosynthesis 1 / 7
arachidonate biosynthesis III (6-desaturase, mammals) 1 / 7
brassicicene C biosynthesis 1 / 7
capsaicin biosynthesis 1 / 7
chitin degradation I (archaea) 1 / 7
icosapentaenoate biosynthesis II (6-desaturase, mammals) 1 / 7
icosapentaenoate biosynthesis III (8-desaturase, mammals) 1 / 7
mevalonate pathway I (eukaryotes and bacteria) 1 / 7
mevalonate pathway II (haloarchaea) 1 / 7
pyoluteorin biosynthesis 1 / 7
retinol biosynthesis 1 / 7
roseoflavin biosynthesis 1 / 7
spongiadioxin C biosynthesis 1 / 7
succinate fermentation to butanoate 1 / 7
superpathway of salicylate degradation 1 / 7
thiocoraline biosynthesis 1 / 7
vitamin E biosynthesis (tocopherols) 1 / 7
L-lysine fermentation to acetate and butanoate 3 / 10
methyl tert-butyl ether degradation 3 / 10
pentachlorophenol degradation 3 / 10
reductive acetyl coenzyme A pathway I (homoacetogenic bacteria) 3 / 10
superpathway of enterobacterial common antigen biosynthesis 3 / 10
superpathway of menaquinol-8 biosynthesis I 3 / 10
superpathway of menaquinol-9 biosynthesis 3 / 10
superpathway of vanillin and vanillate degradation 3 / 10
superpathway of chorismate metabolism 38 / 59
(S)-lactate fermentation to propanoate, acetate and hydrogen 5 / 13
glyoxylate assimilation 5 / 13
streptorubin B biosynthesis 20 / 34
3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) 2 / 9
3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic) 2 / 9
3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent) 2 / 9
4-oxopentanoate degradation 2 / 9
L-lysine degradation V 2 / 9
L-phenylalanine degradation IV (mammalian, via side chain) 2 / 9
acinetobactin biosynthesis 2 / 9
allantoin degradation IV (anaerobic) 2 / 9
aromatic compounds degradation via β-ketoadipate 2 / 9
nicotine biosynthesis 2 / 9
phenylacetate degradation I (aerobic) 2 / 9
pseudomonine biosynthesis 2 / 9
pyridoxal 5'-phosphate salvage II (plants) 2 / 9
superpathway of demethylmenaquinol-8 biosynthesis I 2 / 9
superpathway of demethylmenaquinol-9 biosynthesis 2 / 9
superpathway of menaquinol-8 biosynthesis III 2 / 9
teichuronic acid biosynthesis (B. subtilis 168) 2 / 9
tunicamycin biosynthesis 2 / 9
ubiquinol-10 biosynthesis (late decarboxylation) 2 / 9
ergotamine biosynthesis 4 / 12
peptidoglycan maturation (meso-diaminopimelate containing) 4 / 12
Escherichia coli serotype O:104 O antigen biosynthesis 1 / 8
Escherichia coli serotype O:107 O antigen biosynthesis 1 / 8
Escherichia coli serotype O:117 O antigen biosynthesis 1 / 8
Escherichia coli serotype O:127 O antigen biosynthesis 1 / 8
Escherichia coli serotype O:128 O antigen biosynthesis 1 / 8
Escherichia coli serotype O:21/Salmonella enterica serotype O:38 O antigen biosynthesis 1 / 8
Escherichia coli serotype O:49 O antigen biosynthesis 1 / 8
Escherichia coli serotype O:51/Salmonella enterica serotype O:57 O antigen biosynthesis 1 / 8
Escherichia coli serotype O:52 O antigen biosynthesis 1 / 8
Escherichia coli serotype O:55/Salmonella enterica serotype O:50 O antigen biosynthesis 1 / 8
Escherichia coli serotype O:86 O antigen biosynthesis 1 / 8
Shigella boydii serotype 6 O antigen biosynthesis 1 / 8
anguibactin biosynthesis 1 / 8
aromatic biogenic amine degradation (bacteria) 1 / 8
bacterial bioluminescence 1 / 8
fusicoccin A biosynthesis 1 / 8
glycogen biosynthesis III (from α-maltose 1-phosphate) 1 / 8
isoprene biosynthesis II (engineered) 1 / 8
mevalonate pathway III (Thermoplasma) 1 / 8
mevalonate pathway IV (archaea) 1 / 8
polybrominated dihydroxylated diphenyl ethers biosynthesis 1 / 8
protein O-mannosylation I (yeast) 1 / 8
superpathway of CDP-glucose-derived O-antigen building blocks biosynthesis 1 / 8
tRNA-uridine 2-thiolation (cytoplasmic) 1 / 8
L-glutamate degradation VIII (to propanoate) 3 / 11
ethylmalonyl-CoA pathway 3 / 11
gallate degradation III (anaerobic) 3 / 11
tRNA-uridine 2-thiolation and selenation (bacteria) 3 / 11
gluconeogenesis II (Methanobacterium thermoautotrophicum) 8 / 18
(2S,3E)-2-amino-4-methoxy-but-3-enoate biosynthesis 2 / 10
Escherichia coli serotype O:9 O antigen biosynthesis 2 / 10
CMP-legionaminate biosynthesis I 2 / 10
[2Fe-2S] iron-sulfur cluster biosynthesis 2 / 10
nicotine degradation III (VPP pathway) 2 / 10
starch biosynthesis 2 / 10
superpathway of hexuronide and hexuronate degradation 2 / 10
superpathway of menaquinol-10 biosynthesis 2 / 10
superpathway of menaquinol-11 biosynthesis 2 / 10
superpathway of menaquinol-12 biosynthesis 2 / 10
superpathway of menaquinol-13 biosynthesis 2 / 10
superpathway of menaquinol-6 biosynthesis 2 / 10
superpathway of menaquinol-7 biosynthesis 2 / 10
superpathway of menaquinol-8 biosynthesis II 2 / 10
superpathway of quinolone and alkylquinolone biosynthesis 2 / 10
cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation) 4 / 13
noradrenaline and adrenaline degradation 4 / 13
superpathway of Clostridium acetobutylicum solventogenic fermentation 4 / 13
4-nitrotoluene degradation II 1 / 9
Escherichia coli serotype O:169 O antigen biosynthesis 1 / 9
Escherichia coli serotype O:183/Shigella boydii serotype O:10 O antigen biosynthesis 1 / 9
Escherichia coli serotype O:8 O antigen biosynthesis 1 / 9
cis-geranyl-CoA degradation 1 / 9
ansatrienin biosynthesis 1 / 9
chloramphenicol biosynthesis 1 / 9
gliotoxin biosynthesis 1 / 9
glutathione-mediated detoxification II 1 / 9
myxochelin A and B biosynthesis 1 / 9
p-HBAD biosynthesis 1 / 9
superpathway of demethylmenaquinol-6 biosynthesis I 1 / 9
viridicatumtoxin biosynthesis 1 / 9
L-glutamate degradation VII (to butanoate) 3 / 12
anandamide biosynthesis I 3 / 12
arsenic detoxification (yeast) 3 / 12
indole glucosinolate activation (intact plant cell) 3 / 12
indole-3-acetate biosynthesis II 3 / 12
superpathway of C1 compounds oxidation to CO2 3 / 12
superpathway of fucose and rhamnose degradation 3 / 12
superpathway of nicotine biosynthesis 3 / 12
superpathway of sulfide oxidation (phototrophic sulfur bacteria) 3 / 12
syringate degradation 3 / 12
adenosylcobalamin biosynthesis I (anaerobic) 20 / 36
superpathway of phenylethylamine degradation 2 / 11
toluene degradation III (aerobic) (via p-cresol) 2 / 11
tropane alkaloids biosynthesis 2 / 11
superpathway of purines degradation in plants 7 / 18
superpathway of the 3-hydroxypropanoate cycle 7 / 18
hypoglycin biosynthesis 4 / 14
Escherichia coli serotype O:9a O antigen biosynthesis 1 / 10
meta cleavage pathway of aromatic compounds 1 / 10
NiFe(CO)(CN)2 cofactor biosynthesis 1 / 10
bacilysin biosynthesis 1 / 10
clavulanate biosynthesis 1 / 10
clorobiocin biosynthesis 1 / 10
poly(3-O-β-D-glucopyranosyl-N-acetylgalactosamine 1-phosphate) wall teichoic acid biosynthesis 1 / 10
rosmarinic acid biosynthesis I 1 / 10
superpathway of Clostridium acetobutylicum acidogenic and solventogenic fermentation 6 / 17
type I lipoteichoic acid biosynthesis (S. aureus) 6 / 17
L-tryptophan degradation XI (mammalian, via kynurenine) 10 / 23
10-cis-heptadecenoyl-CoA degradation (yeast) 2 / 12
10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast) 2 / 12
bacillibactin biosynthesis 2 / 12
camalexin biosynthesis 2 / 12
superpathway of dTDP-glucose-derived O-antigen building blocks biosynthesis 7 / 19
cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) 4 / 15
(S)-reticuline biosynthesis I 1 / 11
enterobactin biosynthesis 1 / 11
mycobactin biosynthesis 1 / 11
poly(glycerol phosphate) wall teichoic acid biosynthesis 1 / 11
protein N-glycosylation (Haloferax volcanii) 1 / 11
pyochelin biosynthesis 1 / 11
superpathway of L-arginine, putrescine, and 4-aminobutanoate degradation 1 / 11
tetrahydromethanopterin biosynthesis 3 / 14
nicotine degradation I (pyridine pathway) 5 / 17
(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase) 2 / 13
guadinomine B biosynthesis 2 / 13
superpathway of L-arginine and L-ornithine degradation 2 / 13
ceramide and sphingolipid recycling and degradation (yeast) 4 / 16
superpathway of hyoscyamine (atropine) and scopolamine biosynthesis 4 / 16
poly(ribitol phosphate) wall teichoic acid biosynthesis I (B. subtilis) 1 / 12
purine nucleobases degradation I (anaerobic) 3 / 15
salinosporamide A biosynthesis 3 / 15
superpathway of ergotamine biosynthesis 5 / 18
crotonyl-CoA/ethylmalonyl-CoA/hydroxybutyryl-CoA cycle (engineered) 2 / 14
docosahexaenoate biosynthesis III (6-desaturase, mammals) 2 / 14
firefly bioluminescence 2 / 14
pederin biosynthesis 2 / 14
phytate degradation I 2 / 14
purine nucleobases degradation II (anaerobic) 9 / 24
2,5-xylenol and 3,5-xylenol degradation 1 / 13
L-tryptophan degradation V (side chain pathway) 1 / 13
representative whole plasma arachidonate-derived icosanoids I 1 / 13
superpathway of benzoxazinoid glucosides biosynthesis 1 / 13
toluene degradation IV (aerobic) (via catechol) 1 / 13
crotonate fermentation (to acetate and cyclohexane carboxylate) 3 / 16
superpathway of seleno-compound metabolism 5 / 19
cyclosporin A biosynthesis 2 / 15
superpathway of phylloquinol biosynthesis 2 / 15
sporopollenin precursors biosynthesis 4 / 18
poly(ribitol phosphate) wall teichoic acid biosynthesis II (S. aureus) 1 / 14
pyrrolomycin biosynthesis 1 / 14
superpathway of rosmarinic acid biosynthesis 1 / 14
Ac/N-end rule pathway 6 / 21
benzoate fermentation (to acetate and cyclohexane carboxylate) 3 / 17
peptido-conjugates in tissue regeneration biosynthesis 3 / 17
jasmonic acid biosynthesis 4 / 19
superpathway of novobiocin biosynthesis 4 / 19
superpathway of ergosterol biosynthesis II 9 / 26
superpathway of CMP-sialic acids biosynthesis 1 / 15
superpathway of bitter acids biosynthesis 3 / 18
toluene degradation VI (anaerobic) 3 / 18
superpathway of phospholipid biosynthesis II (plants) 10 / 28
cholesterol degradation to androstenedione I (cholesterol oxidase) 2 / 17
cutin biosynthesis 1 / 16
plasmalogen biosynthesis I (aerobic) 1 / 16
sulfazecin biosynthesis 1 / 16
tRNA methylation (yeast) 1 / 16
mandelate degradation to acetyl-CoA 2 / 18
superpathway of UDP-N-acetylglucosamine-derived O-antigen building blocks biosynthesis 6 / 24
aliphatic glucosinolate biosynthesis, side chain elongation cycle 10 / 30
bryostatin biosynthesis 2 / 19
superpathway of erythromycin biosynthesis 2 / 19
superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis 12 / 33
mycolyl-arabinogalactan-peptidoglycan complex biosynthesis 1 / 18
sitosterol degradation to androstenedione 1 / 18
streptomycin biosynthesis 1 / 18
superpathway of nicotinate degradation 1 / 18
androstenedione degradation I (aerobic) 6 / 25
suberin monomers biosynthesis 2 / 20
superpathway of polybrominated aromatic compound biosynthesis 2 / 20
protein N-glycosylation initial phase (eukaryotic) 1 / 19
platensimycin biosynthesis 6 / 26
Spodoptera littoralis pheromone biosynthesis 3 / 22
superpathway of megalomicin A biosynthesis 3 / 22
superpathway of methanogenesis 2 / 21
superpathway of dTDP-glucose-derived antibiotic building blocks biosynthesis 3 / 23
superpathway of bacteriochlorophyll a biosynthesis 5 / 26
cholesterol degradation to androstenedione II (cholesterol dehydrogenase) 2 / 22
phosalacine biosynthesis 4 / 25
phosphinothricin tripeptide biosynthesis 4 / 25
H. pylori 26695 O-antigen biosynthesis 1 / 21
superpathway of testosterone and androsterone degradation 6 / 28
androstenedione degradation II (anaerobic) 4 / 27
phenolphthiocerol biosynthesis 1 / 23
superpathway of ergosterol biosynthesis I 3 / 26
superpathway of microbial D-galacturonate and D-glucuronate degradation 6 / 31
mupirocin biosynthesis 2 / 26
anaerobic aromatic compound degradation (Thauera aromatica) 1 / 27
superpathway of aerobic toluene degradation 3 / 30
superpathway of aromatic compound degradation via 3-oxoadipate 6 / 35
corallopyronin A biosynthesis 2 / 30
Methanobacterium thermoautotrophicum biosynthetic metabolism 20 / 56
colibactin biosynthesis 7 / 38
superpathway of cholesterol degradation I (cholesterol oxidase) 8 / 42
superpathway of L-lysine degradation 8 / 43
superpathway of pentose and pentitol degradation 7 / 42
superpathway of cholesterol biosynthesis 3 / 38
superpathway of aromatic compound degradation via 2-hydroxypentadienoate 5 / 42
superpathway of cholesterol degradation II (cholesterol dehydrogenase) 8 / 47
superpathway of cholesterol degradation III (oxidase) 4 / 49
mycolate biosynthesis 20 / 205
superpathway of mycolate biosynthesis 21 / 239

Only pathways with at least one candidate gene are shown