Experiment set1S394 for Parabacteroides merdae CL09T00C40

Compare to:

Xylan from corncob 2.5 mg/mL carbon source

Group: carbon source
Media: Varel_Bryant_medium + Xylan from corncob (2.5 mg/mL)
Culturing: Pmerdae_CL09T00C40_ML3, 96 deep-well microplate; 1.2 mL volume, Anaerobic, at 37 (C), shaken=0 rpm
By: Surya on 1/10/25
Media components: 15 uM Hemin, 134 uM L-Methionine, 15 uM Iron (II) sulfate heptahydrate, 8.25 mM L-Cysteine, 23.8 mM Sodium bicarbonate, Mineral 3B solution (6.6 mM Potassium phosphate monobasic, 15.4 mM Sodium Chloride, 98 uM Magnesium chloride hexahydrate, 176.5 uM Calcium chloride dihydrate, 4.2 uM Cobalt chloride hexahydrate, 50.5 uM Manganese (II) chloride tetrahydrate, 9.3 mM Ammonium chloride, 1.75 mM Sodium sulfate)

Specific Phenotypes

For 2 genes in this experiment

For carbon source Xylan from corncob in Parabacteroides merdae CL09T00C40

For carbon source Xylan from corncob across organisms

SEED Subsystems

Subsystem #Specific
Xylose utilization 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.