Experiment set1S196 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

Lactate-Sulfate (60-30 mM) minimal (MoLS4)

200 most detrimental genes:

  gene name fitness t score description  
DVU2454 +0.8 0.7 hypothetical protein (TIGR) compare
DVU2957 +0.8 0.8 hypothetical protein (TIGR) compare
DVU1033 cinA +0.8 1.0 competence/damage-inducible protein CinA protein, truncation (TIGR) compare
DVU2198 +0.8 0.8 hypothetical protein (TIGR) compare
DVU2867 +0.7 1.1 holin (TIGR) compare
DVU1748 +0.7 0.8 conserved hypothetical protein (TIGR) compare
DORF14650 +0.6 1.6 no description compare
DVUA0089 +0.6 0.8 hypothetical protein (TIGR) compare
DORF43335 +0.6 1.0 no description compare
DVU3177 +0.6 2.0 hypothetical protein (TIGR) compare
DVU3260 +0.6 2.6 hypothetical protein (TIGR) compare
DVU1682 +0.5 2.3 GAF domain protein (TIGR) compare
DVU1726 +0.5 0.8 hypothetical protein (TIGR) compare
DORF26446 +0.5 0.9 no description compare
DORF41147 +0.5 0.8 no description compare
DVU0971 +0.5 3.3 molybdenum cofactor biosynthesis protein (TIGR) compare
DVU2183 +0.5 0.9 hypothetical protein (TIGR) compare
DVU3117 +0.5 1.1 hypothetical protein (TIGR) compare
DVU0754 +0.5 1.3 hypothetical protein (TIGR) compare
DVU_tRNA-Thr-1 tRNA-Thr +0.5 0.7 tRNA with anticodon GGT for Thr (VIMSS-AUTO) compare
DVU1479 +0.5 0.8 conserved hypothetical protein (TIGR) compare
DVU0382 +0.5 1.2 hypothetical protein (TIGR) compare
DORF13021 +0.5 1.4 no description compare
DVU3215 drrA +0.5 0.8 response regulator (TIGR) compare
DVU0043 fliQ +0.5 3.5 flagellar biosynthetic protein FliQ (TIGR) compare
DVU2830 +0.5 2.0 hypothetical protein (TIGR) compare
DVU1875 +0.5 1.7 dafA protein (TIGR) compare
DVU1035 glk +0.5 2.2 glucokinase, putative (TIGR) compare
DVU3289 +0.5 1.3 hypothetical protein (TIGR) compare
DVU0034 +0.4 3.2 DSBA-like thioredoxin domain protein (TIGR) compare
DVU1393 +0.4 1.4 hypothetical protein (TIGR) compare
DVU0544 +0.4 2.6 hypothetical protein (TIGR) compare
DVU2473 +0.4 0.6 hypothetical protein (TIGR) compare
DVU1933 +0.4 0.4 peptidase, PfpI family (TIGR) compare
DVU2915 +0.4 0.8 hypothetical protein (TIGR) compare
DORF7930 +0.4 0.7 no description compare
DVUA0084 +0.4 0.6 transcriptional regulator, AbrB family (TIGR) compare
DVU0063 +0.4 1.6 transcriptional regulator, MarR family (TIGR) compare
DVU3139 +0.4 1.1 bacterial extracellular solute-binding protein, family 3 (TIGR) compare
DVU2846 +0.4 1.1 hypothetical protein (TIGR) compare
DVU0787 +0.4 0.6 hypothetical protein (TIGR) compare
DVU3093 rdl +0.4 1.4 rubredoxin-like protein (TIGR) compare
DVU1276 +0.4 3.1 hypothetical protein (TIGR) compare
DVU0359 +0.4 1.2 HesB-like domain (TIGR) compare
DORF10446 +0.4 2.0 SEED: FIG00604570: hypothetical protein compare
DVU_tRNA-Ala-5 tRNA-Ala +0.4 0.4 tRNA with anticodon CGC for Ala (VIMSS-AUTO) compare
DVU1705 +0.4 2.0 type I restriction-modification enzyme, S subunit (TIGR) compare
DVU1129 +0.4 2.1 conserved hypothetical protein (TIGR) compare
DVU2524 +0.4 1.8 cytochrome c3, putative (TIGR) compare
DVU0576 msrB +0.4 2.2 peptide methionine sulfoxide reductase MsrB (TIGR) compare
DVU2808 +0.4 1.1 TonB domain protein (TIGR) compare
DVU0509 +0.4 0.6 conserved hypothetical protein (TIGR) compare
DORF39640 +0.4 1.2 SEED: Flp pilus assembly protein, pilin Flp compare
DVU1491 +0.4 0.7 conserved hypothetical protein (TIGR) compare
DVU0024 +0.4 0.6 conserved hypothetical protein (TIGR) compare
DVU2099 cooC-2 +0.4 1.4 carbon monoxide dehydrogenase accessory protein CooC, putative (TIGR) compare
DVU2831 +0.3 1.4 hypothetical protein (TIGR) compare
DVU1446 +0.3 2.0 heptosyltransferase family protein (TIGR) compare
DVU1577 hslV +0.3 0.9 ATP-dependent protease hslV (TIGR) compare
DVU_tRNA-Arg-1 tRNA-Arg +0.3 0.6 tRNA with anticodon ACG for Arg (VIMSS-AUTO) compare
DVU2496 +0.3 2.3 lipoprotein, putative (TIGR) compare
DVU2528 +0.3 0.8 hypothetical protein (TIGR) compare
DVU0232 +0.3 0.5 hypothetical protein (TIGR) compare
DVU1704 +0.3 0.5 conserved hypothetical protein (TIGR) compare
DVU0376 +0.3 0.4 hypothetical protein (TIGR) compare
DVU0311 +0.3 1.6 flagellar assembly protein FliH, putative (TIGR) compare
DVU2167 +0.3 1.5 hypothetical protein (TIGR) compare
DVU1760 +0.3 0.8 transcriptional regulator, TetR family (TIGR) compare
DVU0934 +0.3 1.1 hypothetical protein (TIGR) compare
DVU1080 +0.3 1.0 iron-sulfur cluster-binding protein (TIGR) compare
DVU0451 +0.3 2.5 chloride channel family protein (TIGR) compare
DVU1061 +0.3 0.7 glycosyl transferase, group 1 family protein (TIGR) compare
DVU1629 yfiA +0.3 1.5 ribosomal subunit interface protein (TIGR) compare
DVU2232 +0.3 2.1 hypothetical protein (TIGR) compare
DVU0747 cysA +0.3 1.2 ABC transporter, ATP-binding protein (TIGR) compare
DVU3325 +0.3 0.9 hypothetical protein (TIGR) compare
DVU1641 +0.3 1.2 conserved hypothetical protein (TIGR) compare
DVU1550 +0.3 1.5 phosphoglycerate mutase family protein (TIGR) compare
DVU1604 +0.3 2.0 hypothetical protein (TIGR) compare
DVU2629 +0.3 1.7 hypothetical protein (TIGR) compare
DVU0595 +0.3 1.2 conserved hypothetical protein (TIGR) compare
DVU1389 +0.3 1.3 hypothetical protein (TIGR) compare
DVUA0110 +0.3 2.4 type III secretion system target, YopB family (TIGR) compare
DVUA0144 +0.3 1.0 hypothetical protein (TIGR) compare
DVU0533 hmcD +0.3 0.5 HmcD, 5.8 kd protein in hmc operon (voordouw) compare
DVU1360 galE +0.3 0.6 UDP-glucose 4-epimerase (TIGR) compare
DVU0643 +0.3 1.9 thiF protein, putative (TIGR) compare
DVU1821 gltB +0.3 1.7 glutamate synthase, large subunit (VIMSS_AUTO) compare
DVU1395 +0.3 0.9 C4-type zinc finger protein, DksA/TraR family (TIGR) compare
DVU1045 +0.3 1.8 hypothetical protein (TIGR) compare
DVU1265 +0.3 1.9 hypothetical protein (TIGR) compare
DVU1193 radC +0.3 1.1 DNA repair protein RadC (TIGR) compare
DVU2495 +0.3 1.0 thioesterase family protein (TIGR) compare
DVU2821 +0.3 0.8 hypothetical protein (TIGR) compare
DVU0937 +0.3 1.8 hypothetical protein (TIGR) compare
DVU2578 +0.3 1.4 response regulator (TIGR) compare
DVU0045 +0.3 2.2 flagellar biosynthesis protein, FliO, putative (TIGR) compare
DVU0798 +0.3 0.6 hypothetical protein (TIGR) compare
DORF43274 +0.3 1.4 no description compare
DORF35977 +0.3 2.4 no description compare
DVU2877 +0.3 1.5 hypothetical protein (TIGR) compare
DVU0234 +0.3 1.8 hypothetical protein (TIGR) compare
DVU1862 +0.3 1.9 GGDEF domain protein (TIGR) compare
DVU1268 +0.3 1.3 hypothetical protein (TIGR) compare
DVU2795 nqr4 +0.3 1.4 NADH:quinone oxidoreductase subunit RnfE (Shelley Haveman) compare
DVUA0080 +0.3 1.3 glycosyl transferase, group 2 family protein (TIGR) compare
DVU1141 +0.3 1.2 hypothetical protein (TIGR) compare
DVU2577 +0.3 1.5 DNA-binding response regulator, LuxR family (TIGR) compare
DVU1511 +0.3 1.0 hypothetical protein (TIGR) compare
DVU2843 vsr +0.3 1.5 DNA mismatch endonuclease Vsr, putative (TIGR) compare
DVU1247 +0.3 0.8 hypothetical protein (TIGR) compare
DVU2649 +0.3 0.8 hypothetical protein (TIGR) compare
DVU2872 +0.3 1.5 phage portal protein, lambda family (TIGR) compare
DVU2827 +0.3 1.8 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU2692 +0.3 0.3 conserved domain protein (TIGR) compare
DORF32294 +0.3 1.8 no description compare
DVU0005 +0.3 1.5 lipoprotein, putative (TIGR) compare
DVU0542 +0.3 1.2 universal stress protein family (TIGR) compare
DVU2568 cpsA +0.3 1.7 peptidase, M20/M25/M40 family (TIGR) compare
DVU0833 +0.3 1.2 conserved hypothetical protein TIGR00252 (TIGR) compare
DVU1630 ptsN +0.3 0.6 PTS system, IIA component (TIGR) compare
DVU2850 +0.3 0.4 tail protein, putative (TIGR) compare
DVU0758 +0.3 0.6 hypothetical protein (TIGR) compare
DVU1962 +0.3 2.1 methyl-accepting chemotaxis protein (TIGR) compare
DVU2624 +0.3 1.2 hypothetical protein (TIGR) compare
DVU3165 +0.2 1.6 conserved domain protein (TIGR) compare
DVU3277 +0.2 0.3 hypothetical protein (TIGR) compare
DORF10920 +0.2 1.0 no description compare
DVU1679 idi +0.2 0.6 isopentenyl-diphosphate delta-isomerase (TIGR) compare
DVU0274 +0.2 1.0 hypothetical protein (TIGR) compare
DVU0310 fliI +0.2 1.9 flagellum-specific ATP synthase FliI (TIGR) compare
DVU2854 +0.2 1.2 tail protein, putative (TIGR) compare
DVU1271 +0.2 1.9 general secretion pathway protein F, putative (TIGR) compare
DVU2028 +0.2 1.8 conserved domain protein (TIGR) compare
DVU1487 +0.2 1.2 conserved domain protein (TIGR) compare
DVU1123 +0.2 1.4 conserved domain protein (TIGR) compare
DVU2609 +0.2 1.8 chemotaxis MotB protein, putative (TIGR) compare
DVU1108 +0.2 1.2 hypothetical protein (TIGR) compare
DVU2408 +0.2 1.0 hypothetical protein (TIGR) compare
DVU0974 +0.2 1.2 hypothetical protein (TIGR) compare
DVU2096 +0.2 0.9 hypothetical protein (TIGR) compare
DVU2825 +0.2 1.5 pyruvate formate-lyase 1 activating enzyme, putative (TIGR) compare
DVU1140 +0.2 2.0 bacteriophage transposase A protein, putative (TIGR) compare
DVU2770 +0.2 0.9 response regulator (TIGR) compare
DVU1068 +0.2 1.1 branched-chain amino acid ABC transporter, permease protein (TIGR) compare
DVU0756 +0.2 1.4 TPR domain protein (TIGR) compare
DVU0014 infA-1 +0.2 0.7 translation initiation factor IF-1 (TIGR) compare
DVU1133 +0.2 0.5 hypothetical protein (TIGR) compare
DVU0186 +0.2 0.8 conserved hypothetical protein (TIGR) compare
DVUA0116 +0.2 1.1 conserved hypothetical protein (TIGR) compare
DVU1522 +0.2 1.5 hypothetical protein (TIGR) compare
DVU3225 +0.2 1.0 hypothetical protein (TIGR) compare
DVU2607 +0.2 1.4 hypothetical protein (TIGR) compare
DVU0522 yviF +0.2 1.2 conserved hypothetical protein (TIGR) compare
DVU2042 +0.2 1.0 Fic family protein (TIGR) compare
DVU0443 +0.2 1.3 exonuclease, putative (Keith Keller) compare
DVU1952 +0.2 1.0 hypothetical protein (TIGR) compare
DVU2829 +0.2 1.8 hypothetical protein (TIGR) compare
DVU2165 +0.2 1.3 lysozyme, putative (TIGR) compare
DVU0982 +0.2 0.7 PHP domain protein (TIGR) compare
DVU2638 +0.2 1.5 conserved domain protein (TIGR) compare
DVU2016 +0.2 0.6 GGDEF domain protein (TIGR) compare
DVU1125 +0.2 1.2 conserved domain protein (TIGR) compare
DVU2209 +0.2 1.1 conserved hypothetical protein (TIGR) compare
DVU1598 +0.2 1.4 conserved hypothetical protein (TIGR) compare
DVUA0104.1 +0.2 1.2 no description compare
DVU2024 +0.2 1.6 conserved hypothetical protein (TIGR) compare
DVU2171 +0.2 1.7 portal protein (TIGR) compare
DVU0883 nrdH +0.2 1.0 glutaredoxin, putative (TIGR) compare
DVU0711 +0.2 1.0 hypothetical protein (TIGR) compare
DVU1084 pstB-1 +0.2 1.3 phosphate ABC transporter, ATP-binding protein (TIGR) compare
DVU0047 +0.2 1.1 flagellar protein FliL (TIGR) compare
DVU0909 +0.2 0.9 hypothetical protein (TIGR) compare
DVU1274 +0.2 1.5 hypothetical protein (TIGR) compare
DVU0966 +0.2 1.6 amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) compare
DVU1273 +0.2 1.8 bacterial type II/III secretion system protein (TIGR) compare
DORF7824 +0.2 1.4 SEED: FIG00603141: hypothetical protein compare
DVU1908 pdxJ +0.2 0.3 pyridoxal phosphate biosynthetic protein PdxJ (TIGR) compare
DVU0859 +0.2 1.6 hypothetical protein (TIGR) compare
DVU0545 +0.2 1.3 conserved hypothetical protein (TIGR) compare
DVU0714 livM +0.2 1.4 branched-chain amino acid ABC transporter, permease protein (TIGR) compare
DVU1104 +0.2 1.2 baseplate assembly protein, putative (TIGR) compare
DVU0716 livF +0.2 1.1 branched-chain amino acid ABC transporter, ATP-binding protein (TIGR) compare
DVU0044 fliP +0.2 1.3 flagellar biosynthetic protein fliP (TIGR) compare
DVU1621 +0.2 0.8 hypothetical protein (TIGR) compare
DVU0976 +0.2 1.4 response regulator (TIGR) compare
DVU2807 +0.2 1.4 biopolymer transport protein, ExbD/TolR family (TIGR) compare
DVU3393 +0.2 0.3 hypothetical protein (TIGR) compare
DVU3302 +0.2 0.9 hypothetical protein (TIGR) compare
DVU2437 +0.2 1.5 ABC transporter, permease protein (TIGR) compare
DVU2886 +0.2 1.5 transcriptional regulator, AraC family (TIGR) compare
DVU2245 +0.2 0.8 mutT/nudix family protein (TIGR) compare
DVU3069 +0.2 1.6 conserved hypothetical protein TIGR00247 (TIGR) compare
DVU0640 pomA +0.2 1.2 chemotaxis protein PomA (TIGR) compare
DVU0527 maF +0.2 1.5 septum formation protein Maf (TIGR) compare
DVU3187 hup-4 +0.2 1.4 DNA-binding protein HU (TIGR) compare
DVU2720 +0.2 1.1 hypothetical protein (TIGR) compare
DVU1088 +0.2 0.5 hypothetical protein (TIGR) compare
DVU3066 +0.2 1.3 DNA-binding protein (TIGR) compare
DVU1938 +0.2 0.6 hypothetical protein (TIGR) compare


Specific Phenotypes

For 1 genes in this experiment