Experiment set1S183 for Synechocystis sp000284455 PCC 6803

Compare to:

growth in full media bubbled with ambient air but diluted to prevent light attenuation

200 most important genes:

  gene name fitness t score description  
SGL_RS15130 -8.4 -5.8 dTDP-glucose 4,6-dehydratase compare
SGL_RS12460 -8.3 -5.7 matrixin family metalloprotease compare
SGL_RS03625 -7.8 -4.0 glycosyltransferase family 1 protein compare
SGL_RS03555 -7.6 -5.3 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS03590 -7.5 -5.2 ATP-grasp domain-containing protein compare
SGL_RS10130 -7.5 -9.0 fatty acid desaturase compare
SGL_RS10585 -7.3 -7.1 MFS transporter compare
SGL_RS16670 -7.2 -8.6 DUF5942 domain-containing protein compare
SGL_RS13465 -7.2 -5.0 class II fumarate hydratase compare
SGL_RS10480 -7.2 -7.0 metallophosphoesterase family protein compare
SGL_RS00245 -7.2 -12.9 glycosyltransferase compare
SGL_RS13560 -7.1 -9.8 glucose-1-phosphate thymidylyltransferase compare
SGL_RS03585 -7.0 -4.8 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS12970 -6.9 -6.7 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD compare
SGL_RS13910 -6.9 -3.7 phasin family protein compare
SGL_RS03550 -6.8 -8.1 CDP-glucose 4,6-dehydratase compare
SGL_RS10775 -6.8 -4.7 DUF3326 domain-containing protein compare
SGL_RS09295 -6.7 -8.0 alpha/beta hydrolase compare
SGL_RS11760 -6.6 -4.6 radical SAM protein compare
SGL_RS15655 -6.6 -9.1 asparaginase compare
SGL_RS04510 -6.6 -4.5 DUF561 domain-containing protein compare
SGL_RS15700 -6.6 -4.5 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
SGL_RS03545 -6.5 -3.5 glucose-1-phosphate cytidylyltransferase compare
SGL_RS04775 -6.5 -4.0 alpha/beta hydrolase compare
SGL_RS02375 -6.5 -4.5 DUF3086 domain-containing protein compare
SGL_RS08650 -6.4 -5.9 S-layer homology domain-containing protein compare
SGL_RS12150 -6.4 -14.6 hypothetical protein compare
SGL_RS03640 -6.4 -6.0 UDP-glucose 4-epimerase GalE compare
SGL_RS03505 -6.4 -9.7 exopolysaccharide transport family protein compare
SGL_RS02955 -6.4 -3.6 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS13555 -6.3 -3.6 aldehyde oxygenase (deformylating) compare
SGL_RS17115 -6.3 -4.3 DUF3370 domain-containing protein compare
SGL_RS03450 -6.3 -3.9 permease compare
SGL_RS19585 -6.2 -2.0 hypothetical protein compare
SGL_RS05375 -6.2 -3.4 hypothetical protein compare
SGL_RS00220 -6.2 -18.2 oligosaccharide flippase family protein compare
SGL_RS14015 -6.1 -6.0 AI-2E family transporter compare
SGL_RS03630 -6.1 -3.8 glycosyltransferase family 2 protein compare
SGL_RS14930 -6.1 -4.2 type I methionyl aminopeptidase compare
SGL_RS02095 -6.1 -4.2 dTDP-4-dehydrorhamnose reductase compare
SGL_RS00195 -6.1 -10.1 glycosyltransferase family 2 protein compare
SGL_RS16770 -6.0 -4.2 LptF/LptG family permease compare
SGL_RS12755 -6.0 -5.9 IMS domain-containing protein compare
SGL_RS05390 -6.0 -4.1 Na(+)/H(+) antiporter subunit B compare
SGL_RS12665 -6.0 -10.2 hypothetical protein compare
SGL_RS05320 -6.0 -4.1 PBP1A family penicillin-binding protein compare
SGL_RS08495 -6.0 -4.1 DUF3370 domain-containing protein compare
SGL_RS17405 -5.9 -4.1 L-2-hydroxyglutarate oxidase compare
SGL_RS13495 -5.9 -5.8 AarF/ABC1/UbiB kinase family protein compare
SGL_RS17740 -5.9 -7.0 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
SGL_RS12350 -5.9 -7.7 MFS transporter compare
SGL_RS17125 -5.9 -4.1 inositol monophosphatase family protein compare
SGL_RS03685 -5.9 -9.8 glycosyltransferase compare
SGL_RS03845 -5.9 -4.1 MotA/TolQ/ExbB proton channel family protein compare
SGL_RS18095 -5.9 -4.1 TIGR03943 family protein compare
SGL_RS17685 -5.9 -7.0 ArsB/NhaD family transporter compare
SGL_RS05385 -5.9 -4.0 DUF4040 domain-containing protein compare
SGL_RS00190 -5.8 -9.7 sulfotransferase compare
SGL_RS03540 -5.8 -4.0 ABC transporter ATP-binding protein compare
SGL_RS17230 -5.8 -5.6 L-aspartate oxidase compare
SGL_RS03560 -5.8 -5.6 class I SAM-dependent methyltransferase compare
SGL_RS12540 -5.7 -5.5 RNA polymerase sigma factor, RpoD/SigA family compare
SGL_RS15840 -5.7 -12.0 class A beta-lactamase compare
SGL_RS12340 -5.7 -7.8 hypothetical protein compare
SGL_RS11025 -5.7 -3.9 oxidoreductase compare
SGL_RS13185 -5.7 -5.5 AI-2E family transporter compare
SGL_RS02515 -5.7 -3.9 M56 family metallopeptidase compare
SGL_RS16545 -5.7 -6.7 LdpA C-terminal domain-containing domain compare
SGL_RS02145 -5.6 -3.9 metallophosphoesterase compare
SGL_RS02740 -5.6 -5.8 HAS-barrel domain-containing protein compare
SGL_RS14510 -5.5 -4.6 DUF3177 family protein compare
SGL_RS16705 -5.5 -3.8 diadenylate cyclase CdaA compare
SGL_RS05500 -5.5 -8.3 ribonuclease R compare
SGL_RS00225 -5.5 -17.9 glycosyltransferase compare
SGL_RS15425 -5.4 -3.8 cobalamin biosynthesis protein CobW compare
SGL_RS18320 -5.4 -5.3 serine/threonine-protein kinase compare
SGL_RS12870 -5.4 -3.7 YqeG family HAD IIIA-type phosphatase compare
SGL_RS13335 -5.4 -8.9 hypothetical protein compare
SGL_RS10370 -5.3 -6.3 anthranilate synthase component I compare
SGL_RS06485 -5.3 -1.7 anti-sigma factor compare
SGL_RS10245 -5.3 -5.1 glycoside hydrolase family protein compare
SGL_RS07570 -5.3 -7.2 ABC transporter permease compare
SGL_RS16860 -5.2 -5.1 small ribosomal subunit biogenesis GTPase RsgA compare
SGL_RS05370 -5.2 -1.7 Na+/H+ antiporter subunit E compare
SGL_RS03635 -5.2 -2.1 glycosyltransferase family 4 protein compare
SGL_RS18315 -5.2 -7.6 DUF3067 family protein compare
SGL_RS02280 -5.2 -3.6 Rne/Rng family ribonuclease compare
SGL_RS09820 -5.2 -2.9 ribosome maturation factor RimM compare
SGL_RS05210 -5.1 -5.0 SLBB domain-containing protein compare
SGL_RS03670 -5.1 -6.1 glycosyltransferase compare
SGL_RS06750 -5.1 -10.4 DUF192 domain-containing protein compare
SGL_RS17330 -5.1 -6.1 biosynthetic arginine decarboxylase compare
SGL_RS02305 -5.1 -7.8 NAD-dependent malic enzyme compare
SGL_RS10160 -5.1 -3.5 B12-binding domain-containing radical SAM protein compare
SGL_RS03000 -5.1 -4.3 spore maturation protein compare
SGL_RS08780 -5.1 -8.4 hypothetical protein compare
SGL_RS02460 -5.0 -3.5 phosphate signaling complex protein PhoU compare
SGL_RS12335 -5.0 -4.9 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS03520 -5.0 -3.4 ABC transporter permease compare
SGL_RS14630 -5.0 -6.8 pentapeptide repeat-containing protein compare
SGL_RS04365 -4.9 -14.0 HAD family hydrolase compare
SGL_RS12560 -4.9 -9.8 ABC transporter permease compare
SGL_RS15845 -4.9 -6.7 polyphosphate kinase 1 compare
SGL_RS17860 -4.9 -4.6 Holliday junction resolvase RuvX compare
SGL_RS08095 -4.9 -10.7 peptide ABC transporter substrate-binding protein compare
SGL_RS10870 -4.8 -13.6 penicillin-binding protein 1A compare
SGL_RS06675 -4.8 -3.3 ABC transporter ATP-binding protein compare
SGL_RS14905 -4.8 -3.0 30S ribosomal protein PSRP-3 compare
SGL_RS00320 -4.8 -5.8 helix-turn-helix transcriptional regulator compare
SGL_RS02985 -4.8 -11.4 HhoA/HhoB/HtrA family serine endopeptidase compare
SGL_RS03655 -4.7 -4.9 glycosyltransferase family 2 protein compare
SGL_RS03060 -4.7 -4.6 phosphoadenosine phosphosulfate reductase compare
SGL_RS16690 -4.7 -3.3 adenosine kinase compare
SGL_RS09550 -4.7 -11.4 acylneuraminate cytidylyltransferase compare
SGL_RS03365 -4.7 -3.0 Ycf66 family protein compare
SGL_RS13510 -4.7 -4.5 transglycosylase domain-containing protein compare
SGL_RS03430 -4.7 -7.8 DUF4335 domain-containing protein compare
SGL_RS17500 -4.7 -4.1 DUF370 domain-containing protein compare
SGL_RS05380 -4.7 -2.6 monovalent cation/H(+) antiporter subunit G compare
SGL_RS04340 -4.7 -10.3 type I glutamate--ammonia ligase compare
SGL_RS18270 -4.6 -4.1 family 10 glycosylhydrolase compare
SGL_RS07170 -4.6 -2.5 glycine cleavage system protein GcvH compare
SGL_RS04490 -4.6 -2.5 2TM domain-containing protein compare
SGL_RS18055 -4.5 -7.4 HAD family hydrolase compare
SGL_RS06490 -4.5 -5.8 permease compare
SGL_RS15925 -4.5 -11.0 ATP-binding protein compare
SGL_RS07810 -4.5 -9.4 glycosyltransferase family 39 protein compare
SGL_RS08760 -4.5 -2.1 hypothetical protein compare
SGL_RS15045 -4.5 -3.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS06780 -4.5 -5.7 hypothetical protein compare
SGL_RS18325 -4.5 -7.3 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS07985 -4.5 -5.9 glycosyltransferase family 39 protein compare
SGL_RS12475 -4.4 -11.6 cation-translocating P-type ATPase compare
SGL_RS07545 -4.4 -5.2 serine/threonine-protein phosphatase compare
SGL_RS02795 -4.4 -7.3 flavin prenyltransferase UbiX compare
SGL_RS11325 -4.4 -3.0 pitrilysin family protein compare
SGL_RS15320 -4.4 -9.6 DEAD/DEAH box helicase compare
SGL_RS14025 -4.4 -8.3 gamma-glutamyl-phosphate reductase compare
SGL_RS03675 -4.3 -1.9 hypothetical protein compare
SGL_RS12490 -4.3 -3.0 glutamate--cysteine ligase compare
SGL_RS07200 -4.3 -3.0 LCP family protein compare
SGL_RS04085 -4.3 -2.7 YlqD family protein compare
SGL_RS07855 -4.3 -14.4 MASE1 domain-containing protein compare
SGL_RS18365 -4.3 -12.2 glycosyltransferase family 9 protein compare
SGL_RS11395 -4.3 -6.6 TlyA family RNA methyltransferase compare
SGL_RS06635 -4.3 -2.3 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
SGL_RS14300 -4.2 -16.1 HAMP domain-containing sensor histidine kinase compare
SGL_RS05465 -4.2 -2.9 hypothetical protein compare
SGL_RS09795 -4.2 -16.1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase compare
SGL_RS13245 -4.2 -7.9 DUF3747 domain-containing protein compare
SGL_RS10790 -4.2 -4.0 DUF4359 domain-containing protein compare
SGL_RS05525 -4.2 -3.4 NUDIX hydrolase compare
SGL_RS18115 -4.2 -1.9 DUF3727 domain-containing protein compare
SGL_RS06020 -4.2 -2.9 sugar ABC transporter permease compare
SGL_RS08845 -4.1 -6.2 LysR family transcriptional regulator compare
SGL_RS16880 -4.1 -2.6 3'(2'),5'-bisphosphate nucleotidase CysQ compare
SGL_RS09845 -4.1 -2.8 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
SGL_RS12770 -4.1 -2.8 uroporphyrinogen-III C-methyltransferase compare
SGL_RS05560 -4.1 -2.8 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS03005 -4.1 -3.0 nucleoside recognition domain-containing protein compare
SGL_RS00255 -4.1 -17.8 glycosyltransferase family 2 protein compare
SGL_RS09635 -4.1 -17.6 TldD/PmbA family protein compare
SGL_RS17575 -4.0 -2.9 DUF1815 family protein compare
SGL_RS07125 -4.0 -21.4 translocation/assembly module TamB domain-containing protein compare
SGL_RS04390 -4.0 -3.2 DUF433 domain-containing protein compare
SGL_RS12235 -4.0 -2.6 aminopeptidase P N-terminal domain-containing protein compare
SGL_RS02975 -4.0 -7.6 transglutaminase domain-containing protein compare
SGL_RS15315 -4.0 -11.1 30S ribosomal protein S12 methylthiotransferase RimO compare
SGL_RS02580 -4.0 -2.6 DUF1818 family protein compare
SGL_RS06950 -4.0 -10.9 DUF2079 domain-containing protein compare
SGL_RS05880 -4.0 -2.7 sugar ABC transporter substrate-binding protein compare
SGL_RS03605 -4.0 -9.9 cephalosporin hydroxylase family protein compare
SGL_RS13855 -4.0 -4.0 hypothetical protein compare
SGL_RS02585 -4.0 -7.2 LptA/OstA family protein compare
SGL_RS14560 -3.9 -4.6 hypothetical protein compare
SGL_RS06130 -3.9 -2.7 anti-sigma regulatory factor compare
SGL_RS02665 -3.9 -2.2 nickel pincer cofactor biosynthesis protein LarC compare
SGL_RS09305 -3.9 -3.8 adenosyl-hopene transferase HpnH compare
SGL_RS08790 -3.9 -2.4 carbohydrate ABC transporter permease compare
SGL_RS14750 -3.9 -10.9 TldD/PmbA family protein compare
SGL_RS13195 -3.9 -3.8 Ig-like domain-containing protein compare
SGL_RS16940 -3.9 -2.5 dephospho-CoA kinase compare
SGL_RS12910 -3.9 -4.6 acetyl-CoA carboxylase, carboxyltransferase subunit beta compare
SGL_RS06775 -3.9 -4.2 type II toxin-antitoxin system PemK/MazF family toxin compare
SGL_RS03850 -3.9 -3.9 biopolymer transporter ExbD compare
SGL_RS03840 -3.8 -2.4 adenylyl-sulfate kinase compare
SGL_RS06440 -3.8 -5.8 NAD-dependent epimerase/dehydratase family protein compare
SGL_RS15370 -3.8 -7.2 DnaJ C-terminal domain-containing protein compare
SGL_RS10360 -3.8 -3.7 hypothetical protein compare
SGL_RS19460 -3.8 -3.1 hypothetical protein compare
SGL_RS06340 -3.8 -11.0 response regulator transcription factor compare
SGL_RS07250 -3.8 -10.2 aminotransferase class IV compare
SGL_RS16100 -3.8 -2.6 heavy metal translocating P-type ATPase compare
SGL_RS18100 -3.7 -2.1 SH3 domain-containing protein compare
SGL_RS03275 -3.7 -11.6 UDP-glucose/GDP-mannose dehydrogenase family protein compare
SGL_RS04360 -3.7 -6.8 5-formyltetrahydrofolate cyclo-ligase compare
SGL_RS20080 -3.7 -1.7 DUF4335 domain-containing protein compare
SGL_RS18170 -3.7 -2.7 PspA/IM30 family protein compare
SGL_RS11610 -3.7 -6.5 class I SAM-dependent methyltransferase compare
SGL_RS12660 -3.7 -8.8 DNA double-strand break repair nuclease NurA compare


Specific Phenotypes

For 15 genes in this experiment