Experiment set1S183 for Synechocystis sp000284455 PCC 6803

Compare to:

growth in full media bubbled with ambient air but diluted to prevent light attenuation

200 most detrimental genes:

  gene name fitness t score description  
SGL_RS18305 +4.7 21.0 hypothetical protein compare
SGL_RS13770 +4.5 7.1 DUF3082 domain-containing protein compare
SGL_RS02785 +4.0 23.6 CRR6 family NdhI maturation factor compare
SGL_RS14200 +4.0 29.3 phosphate ABC transporter substrate-binding protein PstS compare
SGL_RS03965 +3.9 25.0 R3H domain-containing nucleic acid-binding protein compare
SGL_RS06640 +3.8 10.3 DUF4168 domain-containing protein compare
SGL_RS02825 +3.7 26.0 translational GTPase TypA compare
SGL_RS18050 +3.5 18.9 tRNA pseudouridine(55) synthase TruB compare
SGL_RS13170 +3.5 15.2 histidine kinase compare
SGL_RS20075 +3.4 17.7 type II secretion system F family protein compare
SGL_RS05270 +3.4 21.6 serine/threonine-protein kinase compare
SGL_RS10690 +3.3 14.0 PilN domain-containing protein compare
SGL_RS10685 +3.2 19.9 type IV pilus assembly protein PilM compare
SGL_RS17760 +3.2 26.2 circadian clock protein KaiC compare
SGL_RS12210 +3.2 19.2 type IV pilus twitching motility protein PilT compare
SGL_RS05445 +3.2 14.1 response regulator compare
SGL_RS14575 +3.2 5.4 RNA-binding protein compare
SGL_RS14485 +3.2 25.3 transcription-repair coupling factor compare
SGL_RS13950 +3.2 26.2 GspE/PulE family protein compare
SGL_RS17750 +3.1 22.6 circadian clock protein KaiA compare
SGL_RS10445 +3.1 15.0 L-threonylcarbamoyladenylate synthase compare
SGL_RS16325 +3.1 22.3 RidA family protein compare
SGL_RS03300 +3.1 22.2 pilus motility taxis protein HmpF compare
SGL_RS01515 +3.1 26.5 hypothetical protein compare
SGL_RS18310 +3.1 11.1 class I SAM-dependent methyltransferase compare
SGL_RS11580 +3.1 15.6 DUF760 domain-containing protein compare
SGL_RS09815 +3.1 19.6 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD compare
SGL_RS04810 +3.0 5.4 AarF/ABC1/UbiB kinase family protein compare
SGL_RS15805 +3.0 19.0 two component system response regulator RpaA compare
SGL_RS08610 +3.0 18.0 adenylate/guanylate cyclase domain-containing protein compare
SGL_RS10520 +3.0 18.2 J domain-containing protein compare
SGL_RS15240 +3.0 14.5 Hpt domain-containing protein compare
SGL_RS13940 +3.0 21.4 molecular chaperone DnaK compare
SGL_RS15920 +2.9 20.0 GNAT family N-acetyltransferase compare
SGL_RS01990 +2.9 21.2 TonB-dependent siderophore receptor compare
SGL_RS06665 +2.9 12.6 bifunctional nuclease family protein compare
SGL_RS04210 +2.8 23.3 methyl-accepting chemotaxis protein compare
SGL_RS02155 +2.8 14.7 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB compare
SGL_RS02000 +2.8 14.9 MotA/TolQ/ExbB proton channel family protein compare
SGL_RS10695 +2.8 9.0 pilus assembly protein compare
SGL_RS10605 +2.8 20.9 Crp/Fnr family transcriptional regulator compare
SGL_RS08160 +2.8 8.7 hypothetical protein compare
SGL_RS01995 +2.8 14.7 biopolymer transporter ExbD compare
SGL_RS02550 +2.7 8.7 agmatinase compare
SGL_RS12535 +2.7 13.6 radical SAM protein compare
SGL_RS18030 +2.7 14.1 SRPBCC family protein compare
SGL_RS04205 +2.6 13.7 chemotaxis protein CheW compare
SGL_RS10280 +2.6 10.6 hypothetical protein compare
SGL_RS07800 +2.6 3.1 photosystem II protein Y compare
SGL_RS03245 +2.6 19.7 Fe(3+) ABC transporter substrate-binding protein compare
SGL_RS13915 +2.5 7.3 tRNA-Ala compare
SGL_RS06355 +2.5 4.3 carbon dioxide-concentrating mechanism protein CcmK compare
SGL_RS13805 +2.5 12.8 saccharopine dehydrogenase family protein compare
SGL_RS02905 +2.4 13.9 Tab2/Atab2 family RNA-binding protein compare
SGL_RS06605 +2.4 12.4 histidine phosphatase family protein compare
SGL_RS12820 +2.4 16.6 1,4-alpha-glucan branching enzyme compare
SGL_RS11240 +2.4 3.0 photosystem I reaction center subunit IV compare
SGL_RS14390 +2.4 14.4 histidine phosphatase family protein compare
SGL_RS07205 +2.4 12.4 hypothetical protein compare
SGL_RS02205 +2.3 13.9 thioredoxin family protein compare
SGL_RS11950 +2.3 14.2 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE compare
SGL_RS07740 +2.3 9.7 RNA polymerase sigma factor, RpoD/SigA family compare
SGL_RS11810 +2.3 16.2 urea ABC transporter substrate-binding protein compare
SGL_RS08155 +2.3 4.6 Spy/CpxP family protein refolding chaperone compare
SGL_RS15310 +2.3 20.1 response regulator transcription factor compare
SGL_RS04710 +2.3 9.9 GNAT family N-acetyltransferase compare
SGL_RS08575 +2.2 7.6 hypothetical protein compare
SGL_RS09640 +2.2 17.5 peptide chain release factor N(5)-glutamine methyltransferase compare
SGL_RS09925 +2.2 17.4 apolipoprotein N-acyltransferase compare
SGL_RS17495 +2.2 10.3 peptidoglycan editing factor PgeF compare
SGL_RS12550 +2.1 11.3 hybrid sensor histidine kinase/response regulator compare
SGL_RS11830 +2.1 10.4 DUF2996 domain-containing protein compare
SGL_RS03360 +2.1 6.2 50S ribosomal protein L28 compare
SGL_RS07890 +2.1 13.4 ABC transporter substrate-binding protein compare
SGL_RS04320 +2.1 6.6 hypothetical protein compare
SGL_RS06700 +2.0 14.2 peptide chain release factor 3 compare
SGL_RS13325 +2.0 9.3 ABC transporter permease compare
SGL_RS17410 +2.0 9.3 tRNA-Val compare
SGL_RS03440 +2.0 9.2 PAM68 family protein compare
SGL_RS10150 +2.0 7.9 50S ribosomal protein L9 compare
SGL_RS06600 +1.9 10.2 anthranilate phosphoribosyltransferase family protein compare
SGL_RS01035 +1.9 9.6 type III-B CRISPR module RAMP protein Cmr4 compare
SGL_RS02660 +1.9 5.4 L-threonylcarbamoyladenylate synthase compare
SGL_RS17270 +1.9 6.0 hypothetical protein compare
SGL_RS08975 +1.9 13.9 redox-regulated ATPase YchF compare
SGL_RS15105 +1.8 13.0 ABC transporter permease compare
SGL_RS06350 +1.8 5.4 BMC domain-containing protein compare
SGL_RS15630 +1.8 6.3 2Fe-2S iron-sulfur cluster-binding protein compare
SGL_RS11985 +1.8 2.6 LysR family transcriptional regulator compare
SGL_RS15100 +1.8 12.0 SulP family inorganic anion transporter compare
SGL_RS03240 +1.8 10.2 YggT family protein compare
SGL_RS17645 +1.7 10.3 glycoside hydrolase family 57 protein compare
SGL_RS02170 +1.7 1.9 hypothetical protein compare
SGL_RS07535 +1.7 10.4 LysR family transcriptional regulator compare
SGL_RS06045 +1.7 11.1 efflux RND transporter periplasmic adaptor subunit compare
SGL_RS11005 +1.7 10.5 glycosyltransferase compare
SGL_RS07930 +1.7 11.7 hypothetical protein compare
SGL_RS14780 +1.7 7.6 cyanase compare
SGL_RS03935 +1.7 10.7 SLC13 family permease compare
SGL_RS14890 +1.7 5.5 NAD(P)H-quinone oxidoreductase subunit O compare
SGL_RS13895 +1.6 4.9 PipX family protein compare
SGL_RS18285 +1.6 11.0 ABC transporter permease compare
SGL_RS17490 +1.6 7.3 TIGR00266 family protein compare
SGL_RS09335 +1.6 12.6 sodium-dependent bicarbonate transport family permease compare
SGL_RS10420 +1.6 3.2 methionine ABC transporter ATP-binding protein compare
SGL_RS09990 +1.6 2.0 NAD(P)H-quinone oxidoreductase subunit N compare
SGL_RS05655 +1.5 4.1 TPM domain-containing protein compare
SGL_RS06555 +1.5 8.8 FkbM family methyltransferase compare
SGL_RS17900 +1.5 7.6 hypothetical protein compare
SGL_RS07940 +1.5 7.6 type II secretion system protein compare
SGL_RS16750 +1.5 7.7 ABC transporter ATP-binding protein compare
SGL_RS07495 +1.5 11.5 GH116 family glycosyl hydrolase compare
SGL_RS07895 +1.5 5.1 hypothetical protein compare
SGL_RS03315 +1.5 9.8 FAD-binding oxidoreductase compare
SGL_RS04820 +1.5 1.4 LysR family transcriptional regulator compare
SGL_RS09380 +1.5 4.8 hypothetical protein compare
SGL_RS13765 +1.4 8.0 glycolate oxidase subunit GlcD compare
SGL_RS12555 +1.4 3.3 alpha-mannosidase compare
SGL_RS08025 +1.4 0.7 tetratricopeptide repeat protein compare
SGL_RS02485 +1.4 3.3 glutathione S-transferase family protein compare
SGL_RS03475 +1.4 9.7 tRNA dihydrouridine(20/20a) synthase DusA compare
SGL_RS11675 +1.4 3.9 chromophore lyase CpcT/CpeT compare
SGL_RS06255 +1.4 8.4 Tic20 family protein compare
SGL_RS06820 +1.4 2.0 hypothetical protein compare
SGL_RS02730 +1.4 5.8 iron-sulfur cluster assembly accessory protein compare
SGL_RS04335 +1.4 4.0 GNAT family N-acetyltransferase compare
SGL_RS07100 +1.4 8.3 glycogen/starch/alpha-glucan phosphorylase compare
SGL_RS17625 +1.4 7.8 EAL domain-containing protein compare
SGL_RS11920 +1.4 3.6 KH domain-containing protein compare
SGL_RS11655 +1.4 2.7 iron export ABC transporter permease subunit FetB compare
SGL_RS11500 +1.3 7.5 glycoside hydrolase family 3 N-terminal domain-containing protein compare
SGL_RS10340 +1.3 10.5 AGE family epimerase/isomerase compare
SGL_RS03225 +1.3 10.0 NAD(P)H-quinone oxidoreductase subunit 4 compare
SGL_RS10700 +1.3 6.9 type IV pilus secretin PilQ compare
SGL_RS07700 +1.3 4.5 ribosome silencing factor compare
SGL_RS14600 +1.3 6.3 DUF4912 domain-containing protein compare
SGL_RS09920 +1.3 7.6 hypothetical protein compare
SGL_RS16915 +1.3 5.3 trigger factor compare
SGL_RS15485 +1.3 5.2 biopolymer transporter ExbD compare
SGL_RS14495 +1.3 6.9 septal ring lytic transglycosylase RlpA family protein compare
SGL_RS02345 +1.3 2.1 type II toxin-antitoxin system PrlF family antitoxin compare
SGL_RS11060 +1.3 6.3 sodium:solute symporter compare
SGL_RS14695 +1.3 4.5 DUF2839 domain-containing protein compare
SGL_RS03065 +1.3 5.3 heat-inducible transcriptional repressor HrcA compare
SGL_RS06550 +1.3 5.7 glycosyltransferase family 2 protein compare
SGL_RS12525 +1.2 8.5 glycogen synthase GlgA compare
SGL_RS16210 +1.2 3.3 CYTH domain-containing protein compare
SGL_RS10515 +1.2 5.1 protein jag compare
SGL_RS18475 +1.2 6.8 metalloregulator ArsR/SmtB family transcription factor compare
SGL_RS11065 +1.2 4.5 hypothetical protein compare
SGL_RS03465 +1.2 4.8 allophycocyanin subunit alpha-B compare
SGL_RS16960 +1.2 5.8 YggS family pyridoxal phosphate-dependent enzyme compare
SGL_RS18225 +1.2 5.3 cofactor assembly of complex C subunit B compare
SGL_RS13970 +1.2 6.9 pitrilysin family protein compare
SGL_RS17755 +1.2 3.5 circadian clock protein KaiB compare
SGL_RS11045 +1.2 1.5 glutathione peroxidase compare
SGL_RS01030 +1.1 5.5 hypothetical protein compare
SGL_RS16600 +1.1 2.6 hypothetical protein compare
SGL_RS16825 +1.1 4.5 photosystem II D2 protein (photosystem q(a) protein) compare
SGL_RS05235 +1.1 3.4 phycobilisome linker polypeptide compare
SGL_RS04660 +1.1 4.5 phycobilisome rod-core linker polypeptide compare
SGL_RS09350 +1.1 3.6 photosystem II biogenesis protein Psp29 compare
SGL_RS06595 +1.0 3.1 CmpA/NrtA family ABC transporter substrate-binding protein compare
SGL_RS05505 +1.0 6.9 TIGR03279 family radical SAM protein compare
SGL_RS15490 +1.0 5.6 MotA/TolQ/ExbB proton channel family protein compare
SGL_RS15160 +1.0 6.5 amidase compare
SGL_RS14150 +1.0 1.2 antitoxin compare
SGL_RS02180 +1.0 2.9 hypothetical protein compare
SGL_RS13655 +1.0 3.3 DNA-3-methyladenine glycosylase compare
SGL_RS04925 +1.0 1.4 hypothetical protein compare
SGL_RS18710 +1.0 1.2 DUF3155 domain-containing protein compare
SGL_RS06610 +1.0 3.1 RlpA-like double-psi beta-barrel domain-containing protein compare
SGL_RS13365 +1.0 3.1 flavin reductase family protein compare
SGL_RS04445 +1.0 4.1 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
SGL_RS19555 +1.0 2.6 hypothetical protein compare
SGL_RS06270 +1.0 1.7 class III poly(R)-hydroxyalkanoic acid synthase subunit PhaC compare
SGL_RS05455 +1.0 6.6 radical SAM family heme chaperone HemW compare
SGL_RS11800 +1.0 4.4 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase compare
SGL_RS17175 +1.0 2.0 allophycocyanin subunit beta compare
SGL_RS13210 +1.0 2.2 glycosyltransferase compare
SGL_RS14895 +1.0 5.5 DUF2811 domain-containing protein compare
SGL_RS09260 +1.0 7.0 HhoA/HhoB/HtrA family serine endopeptidase compare
SGL_RS08410 +1.0 3.1 peptidylprolyl isomerase compare
SGL_RS18165 +1.0 4.3 hypothetical protein compare
SGL_RS15495 +1.0 5.9 Fe(3+) ABC transporter substrate-binding protein compare
SGL_RS06980 +1.0 2.3 tRNA epoxyqueuosine(34) reductase QueG compare
SGL_RS02540 +1.0 2.9 universal stress protein compare
SGL_RS06795 +0.9 1.3 glutaredoxin 3 compare
SGL_RS05310 +0.9 2.3 hypothetical protein compare
SGL_RS15500 +0.9 5.6 hypothetical protein compare
SGL_RS12430 +0.9 4.1 circadian clock protein KaiC compare
SGL_RS15625 +0.9 6.5 amidohydrolase family protein compare
SGL_RS07760 +0.9 6.0 pitrilysin family protein compare
SGL_RS04595 +0.9 2.1 PPC domain-containing protein compare
SGL_RS06110 +0.9 3.3 glycosyltransferase family 4 protein compare
SGL_RS12695 +0.9 2.4 tetratricopeptide repeat protein compare
SGL_RS13725 +0.9 4.5 peptidylprolyl isomerase compare
SGL_RS06275 +0.9 1.2 hypothetical protein compare
SGL_RS09655 +0.9 2.1 heterocyst frequency control protein PatD compare
SGL_RS06140 +0.9 5.4 threonine ammonia-lyase, biosynthetic compare


Specific Phenotypes

For 15 genes in this experiment