Experiment set1S176 for Synechocystis sp000284455 PCC 6803

Compare to:

growth in full media bubbled with ambient air

200 most important genes:

  gene name fitness t score description  
SGL_RS05375 -6.5 -4.4 hypothetical protein compare
SGL_RS10775 -6.4 -6.2 DUF3326 domain-containing protein compare
SGL_RS14930 -6.0 -5.8 type I methionyl aminopeptidase compare
SGL_RS02515 -5.9 -4.1 M56 family metallopeptidase compare
SGL_RS15655 -5.9 -13.8 asparaginase compare
SGL_RS16545 -5.8 -8.0 LdpA C-terminal domain-containing domain compare
SGL_RS03545 -5.8 -5.6 glucose-1-phosphate cytidylyltransferase compare
SGL_RS14510 -5.7 -5.6 DUF3177 family protein compare
SGL_RS15700 -5.6 -8.6 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
SGL_RS18270 -5.6 -3.9 family 10 glycosylhydrolase compare
SGL_RS04510 -5.3 -6.2 DUF561 domain-containing protein compare
SGL_RS12460 -5.2 -8.3 matrixin family metalloprotease compare
SGL_RS05390 -5.2 -6.1 Na(+)/H(+) antiporter subunit B compare
SGL_RS16705 -5.1 -5.0 diadenylate cyclase CdaA compare
SGL_RS17740 -5.1 -10.4 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
SGL_RS09295 -5.1 -15.0 alpha/beta hydrolase compare
SGL_RS17125 -5.0 -4.9 inositol monophosphatase family protein compare
SGL_RS03060 -5.0 -4.8 phosphoadenosine phosphosulfate reductase compare
SGL_RS10585 -4.9 -14.3 MFS transporter compare
SGL_RS12475 -4.9 -16.1 cation-translocating P-type ATPase compare
SGL_RS05385 -4.8 -8.0 DUF4040 domain-containing protein compare
SGL_RS16670 -4.8 -15.0 DUF5942 domain-containing protein compare
SGL_RS18095 -4.8 -6.5 TIGR03943 family protein compare
SGL_RS04085 -4.6 -3.2 YlqD family protein compare
SGL_RS13185 -4.6 -6.3 AI-2E family transporter compare
SGL_RS07200 -4.6 -3.2 LCP family protein compare
SGL_RS03520 -4.6 -4.4 ABC transporter permease compare
SGL_RS17230 -4.6 -7.0 L-aspartate oxidase compare
SGL_RS03630 -4.6 -6.3 glycosyltransferase family 2 protein compare
SGL_RS02460 -4.6 -4.4 phosphate signaling complex protein PhoU compare
SGL_RS06675 -4.6 -4.4 ABC transporter ATP-binding protein compare
SGL_RS03625 -4.5 -9.8 glycosyltransferase family 1 protein compare
SGL_RS02375 -4.5 -9.1 DUF3086 domain-containing protein compare
SGL_RS15425 -4.5 -6.8 cobalamin biosynthesis protein CobW compare
SGL_RS05320 -4.5 -12.8 PBP1A family penicillin-binding protein compare
SGL_RS17115 -4.5 -7.4 DUF3370 domain-containing protein compare
SGL_RS18320 -4.5 -10.7 serine/threonine-protein kinase compare
SGL_RS03845 -4.5 -6.7 MotA/TolQ/ExbB proton channel family protein compare
SGL_RS06020 -4.4 -3.1 sugar ABC transporter permease compare
SGL_RS11510 -4.4 -3.0 dihydroneopterin aldolase compare
SGL_RS10160 -4.4 -6.0 B12-binding domain-containing radical SAM protein compare
SGL_RS12870 -4.4 -4.2 YqeG family HAD IIIA-type phosphatase compare
SGL_RS02145 -4.4 -9.3 metallophosphoesterase compare
SGL_RS16880 -4.4 -3.0 3'(2'),5'-bisphosphate nucleotidase CysQ compare
SGL_RS17330 -4.4 -8.3 biosynthetic arginine decarboxylase compare
SGL_RS15045 -4.4 -6.0 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS02795 -4.4 -7.8 flavin prenyltransferase UbiX compare
SGL_RS15840 -4.4 -14.3 class A beta-lactamase compare
SGL_RS04775 -4.4 -5.7 alpha/beta hydrolase compare
SGL_RS09820 -4.3 -3.4 ribosome maturation factor RimM compare
SGL_RS13465 -4.3 -10.0 class II fumarate hydratase compare
SGL_RS07545 -4.3 -5.9 serine/threonine-protein phosphatase compare
SGL_RS12235 -4.3 -2.9 aminopeptidase P N-terminal domain-containing protein compare
SGL_RS02280 -4.3 -8.1 Rne/Rng family ribonuclease compare
SGL_RS13855 -4.2 -6.4 hypothetical protein compare
SGL_RS06130 -4.2 -2.9 anti-sigma regulatory factor compare
SGL_RS08790 -4.2 -2.9 carbohydrate ABC transporter permease compare
SGL_RS03000 -4.2 -6.4 spore maturation protein compare
SGL_RS02665 -4.2 -2.8 nickel pincer cofactor biosynthesis protein LarC compare
SGL_RS03840 -4.2 -2.8 adenylyl-sulfate kinase compare
SGL_RS05370 -4.2 -2.4 Na+/H+ antiporter subunit E compare
SGL_RS03540 -4.2 -8.3 ABC transporter ATP-binding protein compare
SGL_RS09845 -4.1 -4.0 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
SGL_RS12540 -4.1 -9.1 RNA polymerase sigma factor, RpoD/SigA family compare
SGL_RS13870 -4.1 -2.8 rRNA maturation RNase YbeY compare
SGL_RS08650 -4.1 -8.2 S-layer homology domain-containing protein compare
SGL_RS11760 -4.1 -9.8 radical SAM protein compare
SGL_RS12755 -4.1 -11.4 IMS domain-containing protein compare
SGL_RS03675 -4.1 -3.3 hypothetical protein compare
SGL_RS14015 -4.1 -12.1 AI-2E family transporter compare
SGL_RS10360 -4.0 -3.8 hypothetical protein compare
SGL_RS04340 -4.0 -11.6 type I glutamate--ammonia ligase compare
SGL_RS11305 -3.9 -3.8 carboxylating nicotinate-nucleotide diphosphorylase compare
SGL_RS12150 -3.9 -18.3 hypothetical protein compare
SGL_RS07650 -3.9 -9.9 aminoglycoside phosphotransferase family protein compare
SGL_RS05560 -3.9 -3.8 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS11025 -3.9 -7.4 oxidoreductase compare
SGL_RS03635 -3.9 -4.1 glycosyltransferase family 4 protein compare
SGL_RS10480 -3.9 -9.8 metallophosphoesterase family protein compare
SGL_RS16770 -3.9 -5.9 LptF/LptG family permease compare
SGL_RS18315 -3.9 -8.3 DUF3067 family protein compare
SGL_RS05380 -3.9 -2.9 monovalent cation/H(+) antiporter subunit G compare
SGL_RS02095 -3.9 -6.0 dTDP-4-dehydrorhamnose reductase compare
SGL_RS13910 -3.9 -2.6 phasin family protein compare
SGL_RS06430 -3.9 -2.5 glycosyltransferase family 2 protein compare
SGL_RS19585 -3.9 -3.5 hypothetical protein compare
SGL_RS05500 -3.8 -12.6 ribonuclease R compare
SGL_RS07170 -3.8 -2.8 glycine cleavage system protein GcvH compare
SGL_RS08495 -3.8 -9.8 DUF3370 domain-containing protein compare
SGL_RS10130 -3.8 -13.5 fatty acid desaturase compare
SGL_RS16860 -3.8 -8.3 small ribosomal subunit biogenesis GTPase RsgA compare
SGL_RS15130 -3.8 -8.8 dTDP-glucose 4,6-dehydratase compare
SGL_RS03420 -3.8 -6.3 UbiD family decarboxylase compare
SGL_RS03505 -3.8 -14.3 exopolysaccharide transport family protein compare
SGL_RS12490 -3.8 -5.1 glutamate--cysteine ligase compare
SGL_RS12970 -3.8 -10.9 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD compare
SGL_RS04490 -3.8 -3.6 2TM domain-containing protein compare
SGL_RS06635 -3.7 -3.5 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
SGL_RS16690 -3.7 -6.1 adenosine kinase compare
SGL_RS03550 -3.7 -14.9 CDP-glucose 4,6-dehydratase compare
SGL_RS05465 -3.7 -3.6 hypothetical protein compare
SGL_RS16100 -3.7 -5.7 heavy metal translocating P-type ATPase compare
SGL_RS02325 -3.7 -2.6 McrB family protein compare
SGL_RS03085 -3.7 -2.4 DUF2862 domain-containing protein compare
SGL_RS11000 -3.7 -2.5 sulfate adenylyltransferase compare
SGL_RS13560 -3.7 -15.3 glucose-1-phosphate thymidylyltransferase compare
SGL_RS06485 -3.7 -2.6 anti-sigma factor compare
SGL_RS12745 -3.7 -2.5 glycine cleavage system aminomethyltransferase GcvT compare
SGL_RS14430 -3.7 -3.5 cobalt ECF transporter T component CbiQ compare
SGL_RS07305 -3.7 -9.2 N-acetylmuramic acid 6-phosphate etherase compare
SGL_RS00195 -3.6 -13.2 glycosyltransferase family 2 protein compare
SGL_RS12335 -3.6 -6.5 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS03560 -3.6 -7.8 class I SAM-dependent methyltransferase compare
SGL_RS12030 -3.6 -4.2 extracellular solute-binding protein compare
SGL_RS10370 -3.6 -6.2 anthranilate synthase component I compare
SGL_RS05525 -3.6 -5.0 NUDIX hydrolase compare
SGL_RS09110 -3.6 -4.2 squalene--hopene cyclase compare
SGL_RS07570 -3.6 -8.8 ABC transporter permease compare
SGL_RS03450 -3.6 -6.4 permease compare
SGL_RS17650 -3.5 -2.4 hypothetical protein compare
SGL_RS18325 -3.5 -8.8 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS04230 -3.5 -2.4 exonuclease subunit SbcC compare
SGL_RS13245 -3.5 -9.0 DUF3747 domain-containing protein compare
SGL_RS14025 -3.5 -10.8 gamma-glutamyl-phosphate reductase compare
SGL_RS05880 -3.5 -3.3 sugar ABC transporter substrate-binding protein compare
SGL_RS11135 -3.5 -1.9 D-alanyl-D-alanine dipeptidase DdpX compare
SGL_RS10245 -3.5 -8.0 glycoside hydrolase family protein compare
SGL_RS03590 -3.5 -5.8 ATP-grasp domain-containing protein compare
SGL_RS02580 -3.5 -3.3 DUF1818 family protein compare
SGL_RS03655 -3.4 -5.0 glycosyltransferase family 2 protein compare
SGL_RS03430 -3.4 -11.0 DUF4335 domain-containing protein compare
SGL_RS03685 -3.4 -12.1 glycosyltransferase compare
SGL_RS07840 -3.4 -3.2 SDR family NAD(P)-dependent oxidoreductase compare
SGL_RS12770 -3.4 -4.0 uroporphyrinogen-III C-methyltransferase compare
SGL_RS17405 -3.4 -7.8 L-2-hydroxyglutarate oxidase compare
SGL_RS12340 -3.4 -12.2 hypothetical protein compare
SGL_RS13335 -3.4 -11.5 hypothetical protein compare
SGL_RS08095 -3.4 -15.3 peptide ABC transporter substrate-binding protein compare
SGL_RS03275 -3.4 -13.6 UDP-glucose/GDP-mannose dehydrogenase family protein compare
SGL_RS03670 -3.4 -9.4 glycosyltransferase compare
SGL_RS00245 -3.4 -12.8 glycosyltransferase compare
SGL_RS12350 -3.4 -8.0 MFS transporter compare
SGL_RS00320 -3.4 -5.7 helix-turn-helix transcriptional regulator compare
SGL_RS04365 -3.4 -15.3 HAD family hydrolase compare
SGL_RS14425 -3.4 -3.2 energy-coupling factor ABC transporter ATP-binding protein compare
SGL_RS07125 -3.4 -24.0 translocation/assembly module TamB domain-containing protein compare
SGL_RS03555 -3.4 -8.5 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS17470 -3.4 -2.3 nickel pincer cofactor biosynthesis protein LarB compare
SGL_RS06780 -3.3 -6.6 hypothetical protein compare
SGL_RS12665 -3.3 -12.3 hypothetical protein compare
SGL_RS14300 -3.3 -18.6 HAMP domain-containing sensor histidine kinase compare
SGL_RS00220 -3.3 -18.1 oligosaccharide flippase family protein compare
SGL_RS06340 -3.3 -10.4 response regulator transcription factor compare
SGL_RS02740 -3.3 -6.7 HAS-barrel domain-containing protein compare
SGL_RS15845 -3.3 -9.9 polyphosphate kinase 1 compare
SGL_RS18055 -3.3 -10.8 HAD family hydrolase compare
SGL_RS13510 -3.3 -7.6 transglycosylase domain-containing protein compare
SGL_RS07250 -3.3 -10.9 aminotransferase class IV compare
SGL_RS20080 -3.3 -2.3 DUF4335 domain-containing protein compare
SGL_RS05210 -3.3 -6.2 SLBB domain-containing protein compare
SGL_RS12985 -3.2 -3.4 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase compare
SGL_RS16940 -3.2 -3.1 dephospho-CoA kinase compare
SGL_RS14860 -3.2 -2.2 8-amino-7-oxononanoate synthase compare
SGL_RS17500 -3.2 -6.7 DUF370 domain-containing protein compare
SGL_RS02985 -3.2 -13.7 HhoA/HhoB/HtrA family serine endopeptidase compare
SGL_RS03005 -3.2 -3.1 nucleoside recognition domain-containing protein compare
SGL_RS06750 -3.2 -11.3 DUF192 domain-containing protein compare
SGL_RS03585 -3.2 -9.2 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS06440 -3.2 -5.5 NAD-dependent epimerase/dehydratase family protein compare
SGL_RS08845 -3.2 -5.5 LysR family transcriptional regulator compare
SGL_RS13495 -3.2 -9.7 AarF/ABC1/UbiB kinase family protein compare
SGL_RS07180 -3.2 -6.5 carboxynorspermidine decarboxylase compare
SGL_RS03640 -3.2 -9.1 UDP-glucose 4-epimerase GalE compare
SGL_RS10065 -3.2 -14.9 four-carbon acid sugar kinase family protein compare
SGL_RS06490 -3.2 -8.2 permease compare
SGL_RS04650 -3.1 -14.9 tetratricopeptide repeat protein compare
SGL_RS18115 -3.1 -2.8 DUF3727 domain-containing protein compare
SGL_RS00190 -3.1 -10.8 sulfotransferase compare
SGL_RS11395 -3.1 -11.3 TlyA family RNA methyltransferase compare
SGL_RS14750 -3.1 -14.9 TldD/PmbA family protein compare
SGL_RS14540 -3.1 -2.9 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR compare
SGL_RS15560 -3.1 -2.1 dethiobiotin synthase compare
SGL_RS15370 -3.1 -7.5 DnaJ C-terminal domain-containing protein compare
SGL_RS14435 -3.1 -1.8 cobalt transporter CbiM compare
SGL_RS10305 -3.1 -7.2 PIN/TRAM domain-containing protein compare
SGL_RS14505 -3.1 -5.7 glutamate-5-semialdehyde dehydrogenase compare
SGL_RS03185 -3.1 -2.1 biotin--[acetyl-CoA-carboxylase] ligase compare
SGL_RS03365 -3.1 -4.0 Ycf66 family protein compare
SGL_RS18365 -3.1 -9.4 glycosyltransferase family 9 protein compare
SGL_RS07855 -3.0 -16.7 MASE1 domain-containing protein compare
SGL_RS08115 -3.0 -4.9 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS13535 -3.0 -2.9 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
SGL_RS12910 -3.0 -6.3 acetyl-CoA carboxylase, carboxyltransferase subunit beta compare
SGL_RS12400 -3.0 -2.1 lysophospholipid acyltransferase family protein compare
SGL_RS12575 -3.0 -2.9 riboflavin synthase compare
SGL_RS05470 -3.0 -2.9 dihydropteroate synthase compare
SGL_RS09635 -3.0 -17.5 TldD/PmbA family protein compare
SGL_RS08275 -3.0 -2.0 tetratricopeptide repeat protein compare
SGL_RS09860 -3.0 -4.0 carotenoid biosynthesis protein compare
SGL_RS02310 -3.0 -12.0 cysteine synthase A compare


Specific Phenotypes

For 9 genes in this experiment