Experiment set1S161 for Synechocystis sp000284455 PCC 6803

Compare to:

growth in full media supplemented with 3 .M Cl2Co

200 most important genes:

  gene name fitness t score description  
SGL_RS03950 -5.2 -7.1 homocysteine biosynthesis protein compare
SGL_RS08965 -5.1 -14.0 chlorophyll a/b binding light-harvesting protein compare
SGL_RS13170 -5.1 -4.9 histidine kinase compare
SGL_RS15805 -4.8 -7.3 two component system response regulator RpaA compare
SGL_RS07650 -4.7 -6.6 aminoglycoside phosphotransferase family protein compare
SGL_RS02460 -4.7 -4.5 phosphate signaling complex protein PhoU compare
SGL_RS08535 -4.5 -3.1 NIL domain-containing protein compare
SGL_RS11775 -4.5 -8.5 isoaspartyl peptidase/L-asparaginase compare
SGL_RS18350 -4.3 -13.4 translation elongation factor 4 compare
SGL_RS17760 -4.2 -11.2 circadian clock protein KaiC compare
SGL_RS05560 -3.9 -2.7 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS02260 -3.9 -2.6 HEAT repeat domain-containing protein compare
SGL_RS12770 -3.8 -3.7 uroporphyrinogen-III C-methyltransferase compare
SGL_RS09820 -3.8 -4.4 ribosome maturation factor RimM compare
SGL_RS07200 -3.7 -2.5 LCP family protein compare
SGL_RS14660 -3.7 -4.3 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
SGL_RS12870 -3.7 -5.5 YqeG family HAD IIIA-type phosphatase compare
SGL_RS17125 -3.6 -4.9 inositol monophosphatase family protein compare
SGL_RS16915 -3.6 -5.3 trigger factor compare
SGL_RS11000 -3.6 -4.2 sulfate adenylyltransferase compare
SGL_RS03775 -3.6 -5.9 membrane protein compare
SGL_RS17270 -3.6 -5.4 hypothetical protein compare
SGL_RS02665 -3.6 -3.4 nickel pincer cofactor biosynthesis protein LarC compare
SGL_RS18365 -3.6 -12.1 glycosyltransferase family 9 protein compare
SGL_RS16100 -3.6 -7.2 heavy metal translocating P-type ATPase compare
SGL_RS02825 -3.5 -12.5 translational GTPase TypA compare
SGL_RS06130 -3.5 -4.1 anti-sigma regulatory factor compare
SGL_RS14695 -3.5 -5.6 DUF2839 domain-containing protein compare
SGL_RS00800 -3.4 -5.0 putative addiction module antidote protein compare
SGL_RS14430 -3.4 -4.0 cobalt ECF transporter T component CbiQ compare
SGL_RS04490 -3.3 -3.1 2TM domain-containing protein compare
SGL_RS04390 -3.3 -4.6 DUF433 domain-containing protein compare
SGL_RS15530 -3.3 -2.3 phosphoribosylformylglycinamidine synthase subunit PurQ compare
SGL_RS06430 -3.3 -2.2 glycosyltransferase family 2 protein compare
SGL_RS05370 -3.3 -2.6 Na+/H+ antiporter subunit E compare
SGL_RS17520 -3.2 -3.1 DUF3352 domain-containing protein compare
SGL_RS13870 -3.2 -4.7 rRNA maturation RNase YbeY compare
SGL_RS14540 -3.2 -3.0 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR compare
SGL_RS03970 -3.2 -2.2 thiamine phosphate synthase compare
SGL_RS14435 -3.1 -2.0 cobalt transporter CbiM compare
SGL_RS12490 -3.1 -5.1 glutamate--cysteine ligase compare
SGL_RS06355 -3.1 -3.6 carbon dioxide-concentrating mechanism protein CcmK compare
SGL_RS09395 -3.0 -2.9 aldo/keto reductase compare
SGL_RS09790 -3.0 -9.7 hypothetical protein compare
SGL_RS07605 -3.0 -3.6 HEAT repeat domain-containing protein compare
SGL_RS12575 -3.0 -2.9 riboflavin synthase compare
SGL_RS03790 -3.0 -3.5 GTPase ObgE compare
SGL_RS03365 -3.0 -3.8 Ycf66 family protein compare
SGL_RS14425 -3.0 -4.0 energy-coupling factor ABC transporter ATP-binding protein compare
SGL_RS15920 -2.9 -9.6 GNAT family N-acetyltransferase compare
SGL_RS10305 -2.9 -6.2 PIN/TRAM domain-containing protein compare
SGL_RS02310 -2.9 -14.6 cysteine synthase A compare
SGL_RS14335 -2.9 -1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase compare
SGL_RS05440 -2.9 -2.7 ACP S-malonyltransferase compare
SGL_RS12695 -2.9 -4.2 tetratricopeptide repeat protein compare
SGL_RS07840 -2.8 -2.7 SDR family NAD(P)-dependent oxidoreductase compare
SGL_RS12920 -2.8 -1.9 hypothetical protein compare
SGL_RS05470 -2.8 -3.3 dihydropteroate synthase compare
SGL_RS13535 -2.8 -3.2 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
SGL_RS03840 -2.8 -3.1 adenylyl-sulfate kinase compare
SGL_RS11240 -2.8 -2.5 photosystem I reaction center subunit IV compare
SGL_RS13905 -2.7 -7.0 hypothetical protein compare
SGL_RS17750 -2.7 -9.7 circadian clock protein KaiA compare
SGL_RS12335 -2.7 -6.5 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS15045 -2.7 -8.0 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS14575 -2.7 -2.1 RNA-binding protein compare
SGL_RS05235 -2.7 -4.5 phycobilisome linker polypeptide compare
SGL_RS06590 -2.6 -5.1 nitrate ABC transporter permease compare
SGL_RS05655 -2.6 -4.5 TPM domain-containing protein compare
SGL_RS09385 -2.6 -2.4 2-carboxy-1,4-naphthoquinone phytyltransferase compare
SGL_RS16880 -2.6 -3.4 3'(2'),5'-bisphosphate nucleotidase CysQ compare
SGL_RS12930 -2.6 -2.9 DUF1257 domain-containing protein compare
SGL_RS02540 -2.6 -5.8 universal stress protein compare
SGL_RS14445 -2.5 -3.4 hypothetical protein compare
SGL_RS04525 -2.5 -2.4 photosynthesis system II assembly factor Ycf48 compare
SGL_RS05240 -2.5 -3.1 phycobilisome linker polypeptide compare
SGL_RS07105 -2.5 -7.2 precorrin-6Y C5,15-methyltransferase subunit CbiT compare
SGL_RS14920 -2.5 -2.8 cation:proton antiporter compare
SGL_RS07870 -2.5 -3.2 Ycf51 family protein compare
SGL_RS10320 -2.5 -2.8 ribosome biogenesis GTPase Der compare
SGL_RS17470 -2.4 -3.6 nickel pincer cofactor biosynthesis protein LarB compare
SGL_RS13055 -2.4 -2.7 protein translocase subunit SecF compare
SGL_RS06020 -2.4 -5.1 sugar ABC transporter permease compare
SGL_RS06675 -2.4 -4.8 ABC transporter ATP-binding protein compare
SGL_RS14105 -2.4 -2.8 2-succinylbenzoate--CoA ligase compare
SGL_RS15620 -2.3 -3.3 cobyric acid synthase CobQ compare
SGL_RS14505 -2.3 -6.3 glutamate-5-semialdehyde dehydrogenase compare
SGL_RS14225 -2.3 -2.5 PspA/IM30 family protein compare
SGL_RS14860 -2.3 -3.3 8-amino-7-oxononanoate synthase compare
SGL_RS03065 -2.2 -6.3 heat-inducible transcriptional repressor HrcA compare
SGL_RS15345 -2.2 -10.8 FAD-dependent oxidoreductase compare
SGL_RS16360 -2.2 -3.8 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
SGL_RS06460 -2.2 -6.2 fatty acid desaturase compare
SGL_RS11675 -2.2 -3.7 chromophore lyase CpcT/CpeT compare
SGL_RS03520 -2.2 -4.2 ABC transporter permease compare
SGL_RS08710 -2.1 -4.1 folylpolyglutamate synthase/dihydrofolate synthase family protein compare
SGL_RS12545 -2.1 -2.4 GTPase Era compare
SGL_RS17175 -2.1 -4.9 allophycocyanin subunit beta compare
SGL_RS09890 -2.1 -2.5 DUF3007 family protein compare
SGL_RS11910 -2.1 -7.2 hemolysin family protein compare
SGL_RS02850 -2.1 -6.0 uracil phosphoribosyltransferase compare
SGL_RS03250 -2.1 -4.5 tRNA (guanosine(37)-N1)-methyltransferase TrmD compare
SGL_RS09845 -2.1 -5.4 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
SGL_RS14045 -2.1 -5.9 hypothetical protein compare
SGL_RS04510 -2.1 -6.1 DUF561 domain-containing protein compare
SGL_RS05380 -2.1 -3.3 monovalent cation/H(+) antiporter subunit G compare
SGL_RS05220 -2.1 -6.7 DUF1995 family protein compare
SGL_RS08790 -2.1 -3.0 carbohydrate ABC transporter permease compare
SGL_RS18300 -2.0 -3.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SGL_RS09860 -2.0 -4.1 carotenoid biosynthesis protein compare
SGL_RS16940 -2.0 -2.4 dephospho-CoA kinase compare
SGL_RS04550 -2.0 -6.0 glutamate 5-kinase compare
SGL_RS02095 -2.0 -5.6 dTDP-4-dehydrorhamnose reductase compare
SGL_RS15845 -1.9 -9.0 polyphosphate kinase 1 compare
SGL_RS12925 -1.9 -5.2 AAA family ATPase compare
SGL_RS03540 -1.9 -8.0 ABC transporter ATP-binding protein compare
SGL_RS09720 -1.9 -3.2 beta-ketoacyl-ACP synthase compare
SGL_RS06110 -1.9 -4.9 glycosyltransferase family 4 protein compare
SGL_RS06595 -1.9 -4.8 CmpA/NrtA family ABC transporter substrate-binding protein compare
SGL_RS12400 -1.9 -2.7 lysophospholipid acyltransferase family protein compare
SGL_RS11580 -1.9 -5.8 DUF760 domain-containing protein compare
SGL_RS04155 -1.8 -2.4 reverse transcriptase domain-containing protein compare
SGL_RS15560 -1.8 -2.1 dethiobiotin synthase compare
SGL_RS09810 -1.8 -2.0 photosystem I reaction center subunit III compare
SGL_RS06585 -1.8 -3.4 nitrate ABC transporter ATP-binding protein compare
SGL_RS12030 -1.8 -4.3 extracellular solute-binding protein compare
SGL_RS17305 -1.8 -2.8 pyrroline-5-carboxylate reductase compare
SGL_RS08115 -1.8 -3.9 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS05880 -1.7 -3.1 sugar ABC transporter substrate-binding protein compare
SGL_RS14585 -1.7 -2.0 TolB family protein compare
SGL_RS04735 -1.7 -2.5 hypothetical protein compare
SGL_RS13915 -1.7 -3.5 tRNA-Ala compare
SGL_RS03085 -1.7 -4.1 DUF2862 domain-containing protein compare
SGL_RS10775 -1.7 -6.5 DUF3326 domain-containing protein compare
SGL_RS10155 -1.6 -3.8 hypothetical protein compare
SGL_RS05980 -1.6 -3.5 hypothetical protein compare
SGL_RS08175 -1.6 -2.6 serine hydrolase compare
SGL_RS02550 -1.6 -6.5 agmatinase compare
SGL_RS02600 -1.5 -6.3 photosystem I reaction center subunit PsaK compare
SGL_RS15370 -1.5 -5.2 DnaJ C-terminal domain-containing protein compare
SGL_RS12050 -1.5 -7.1 DUF1517 domain-containing protein compare
SGL_RS17650 -1.5 -2.3 hypothetical protein compare
SGL_RS16085 -1.5 -10.8 heavy metal translocating P-type ATPase compare
SGL_RS03870 -1.5 -9.4 histidinol dehydrogenase compare
SGL_RS02660 -1.5 -6.2 L-threonylcarbamoyladenylate synthase compare
SGL_RS07305 -1.5 -4.6 N-acetylmuramic acid 6-phosphate etherase compare
SGL_RS20180 -1.5 -1.7 membrane protein compare
SGL_RS16545 -1.5 -8.7 LdpA C-terminal domain-containing domain compare
SGL_RS03265 -1.4 -1.8 photosystem II complex extrinsic protein PsbU compare
SGL_RS14340 -1.4 -6.0 protein phosphatase 2C domain-containing protein compare
SGL_RS07040 -1.4 -6.8 DUF1824 family protein compare
SGL_RS12785 -1.4 -5.7 TIGR04376 family protein compare
SGL_RS08275 -1.4 -1.8 tetratricopeptide repeat protein compare
SGL_RS11510 -1.4 -2.3 dihydroneopterin aldolase compare
SGL_RS13490 -1.4 -5.0 aspartate aminotransferase compare
SGL_RS03440 -1.4 -5.1 PAM68 family protein compare
SGL_RS12910 -1.4 -5.4 acetyl-CoA carboxylase, carboxyltransferase subunit beta compare
SGL_RS12235 -1.4 -2.4 aminopeptidase P N-terminal domain-containing protein compare
SGL_RS02220 -1.4 -2.6 phosphoribosylformylglycinamidine synthase subunit PurL compare
SGL_RS10145 -1.3 -4.7 cytochrome c compare
SGL_RS03185 -1.3 -1.8 biotin--[acetyl-CoA-carboxylase] ligase compare
SGL_RS07540 -1.3 -7.7 endonuclease MutS2 compare
SGL_RS10370 -1.3 -3.8 anthranilate synthase component I compare
SGL_RS16080 -1.3 -10.0 precorrin-8X methylmutase compare
SGL_RS07995 -1.3 -6.6 RIP metalloprotease RseP compare
SGL_RS11920 -1.3 -2.9 KH domain-containing protein compare
SGL_RS04785 -1.3 -4.9 CPP1-like family protein compare
SGL_RS14285 -1.3 -2.1 hypothetical protein compare
SGL_RS14025 -1.2 -6.8 gamma-glutamyl-phosphate reductase compare
SGL_RS05390 -1.2 -3.9 Na(+)/H(+) antiporter subunit B compare
SGL_RS12585 -1.2 -2.2 ABC transporter permease subunit compare
SGL_RS09380 -1.2 -1.6 hypothetical protein compare
SGL_RS16860 -1.2 -5.5 small ribosomal subunit biogenesis GTPase RsgA compare
SGL_RS09160 -1.2 -2.2 thioredoxin family protein compare
SGL_RS11305 -1.2 -3.8 carboxylating nicotinate-nucleotide diphosphorylase compare
SGL_RS13510 -1.2 -4.1 transglycosylase domain-containing protein compare
SGL_RS06340 -1.2 -7.3 response regulator transcription factor compare
SGL_RS19475 -1.2 -1.2 hypothetical protein compare
SGL_RS17685 -1.2 -7.0 ArsB/NhaD family transporter compare
SGL_RS15865 -1.2 -2.4 septum site-determining protein MinD compare
SGL_RS05500 -1.2 -6.8 ribonuclease R compare
SGL_RS03425 -1.2 -1.6 precorrin-3B C(17)-methyltransferase compare
SGL_RS08495 -1.2 -6.3 DUF3370 domain-containing protein compare
SGL_RS03625 -1.2 -5.4 glycosyltransferase family 1 protein compare
SGL_RS07150 -1.2 -8.1 FAD/NAD(P)-binding oxidoreductase compare
SGL_RS06350 -1.1 -2.3 BMC domain-containing protein compare
SGL_RS13575 -1.1 -1.6 DUF2281 domain-containing protein compare
SGL_RS03935 -1.1 -7.8 SLC13 family permease compare
SGL_RS19610 -1.1 -3.3 hypothetical protein compare
SGL_RS07965 -1.1 -3.1 DUF4351 domain-containing protein compare
SGL_RS17240 -1.1 -4.8 photosystem I reaction center subunit PsaK compare
SGL_RS12625 -1.1 -2.7 NAD(P)H-quinone oxidoreductase subunit 4 compare
SGL_RS01035 -1.1 -5.3 type III-B CRISPR module RAMP protein Cmr4 compare
SGL_RS02485 -1.1 -2.3 glutathione S-transferase family protein compare
SGL_RS05385 -1.1 -3.8 DUF4040 domain-containing protein compare
SGL_RS10340 -1.1 -6.5 AGE family epimerase/isomerase compare
SGL_RS19170 -1.1 -1.8 chlorophyll a/b-binding protein compare
SGL_RS06755 -1.1 -5.3 bacterioferritin-associated ferredoxin compare
SGL_RS02345 -1.1 -3.7 type II toxin-antitoxin system PrlF family antitoxin compare
SGL_RS13555 -1.0 -3.1 aldehyde oxygenase (deformylating) compare


Specific Phenotypes

For 3 genes in this experiment

For metal stress Cobalt chloride hexahydrate in Synechocystis sp000284455 PCC 6803

For metal stress Cobalt chloride hexahydrate across organisms