Experiment set1S160 for Synechocystis sp000284455 PCC 6803

Compare to:

growth in full media supplemented with 5mM sodum metaarsenite

200 most important genes:

  gene name fitness t score description  
SGL_RS11355 -7.8 -11.9 arsenite efflux transporter Acr3 compare
SGL_RS12870 -6.0 -4.1 YqeG family HAD IIIA-type phosphatase compare
SGL_RS13555 -5.5 -4.4 aldehyde oxygenase (deformylating) compare
SGL_RS03365 -5.4 -3.7 Ycf66 family protein compare
SGL_RS06800 -5.0 -11.1 glutathione synthase compare
SGL_RS05370 -5.0 -2.5 Na+/H+ antiporter subunit E compare
SGL_RS03775 -4.6 -4.4 membrane protein compare
SGL_RS18180 -4.4 -6.4 ABC transporter permease compare
SGL_RS12770 -4.2 -2.9 uroporphyrinogen-III C-methyltransferase compare
SGL_RS16915 -4.0 -4.6 trigger factor compare
SGL_RS02375 -3.9 -10.4 DUF3086 domain-containing protein compare
SGL_RS13685 -3.8 -11.7 ABC transporter ATP-binding protein compare
SGL_RS05560 -3.8 -2.6 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS12030 -3.8 -2.6 extracellular solute-binding protein compare
SGL_RS03250 -3.7 -5.0 tRNA (guanosine(37)-N1)-methyltransferase TrmD compare
SGL_RS05390 -3.7 -4.5 Na(+)/H(+) antiporter subunit B compare
SGL_RS16880 -3.5 -3.4 3'(2'),5'-bisphosphate nucleotidase CysQ compare
SGL_RS07935 -3.5 -4.4 hypothetical protein compare
SGL_RS03520 -3.5 -6.2 ABC transporter permease compare
SGL_RS13855 -3.5 -6.7 hypothetical protein compare
SGL_RS02665 -3.4 -3.2 nickel pincer cofactor biosynthesis protein LarC compare
SGL_RS15435 -3.4 -7.8 PD40 domain-containing protein compare
SGL_RS12490 -3.3 -4.5 glutamate--cysteine ligase compare
SGL_RS07200 -3.3 -3.1 LCP family protein compare
SGL_RS05380 -3.2 -3.9 monovalent cation/H(+) antiporter subunit G compare
SGL_RS13550 -3.2 -2.0 long-chain acyl-[acyl-carrier-protein] reductase compare
SGL_RS06130 -3.2 -3.7 anti-sigma regulatory factor compare
SGL_RS05375 -3.2 -3.0 hypothetical protein compare
SGL_RS11000 -3.1 -4.7 sulfate adenylyltransferase compare
SGL_RS17520 -3.1 -3.0 DUF3352 domain-containing protein compare
SGL_RS17650 -3.1 -2.9 hypothetical protein compare
SGL_RS03540 -3.1 -8.7 ABC transporter ATP-binding protein compare
SGL_RS01905 -3.1 -13.2 GDP-mannose 4,6-dehydratase compare
SGL_RS14435 -3.0 -2.0 cobalt transporter CbiM compare
SGL_RS03085 -3.0 -5.0 DUF2862 domain-containing protein compare
SGL_RS15045 -3.0 -7.4 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS16735 -3.0 -2.0 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
SGL_RS14425 -3.0 -3.9 energy-coupling factor ABC transporter ATP-binding protein compare
SGL_RS13055 -2.9 -2.0 protein translocase subunit SecF compare
SGL_RS15530 -2.8 -2.7 phosphoribosylformylglycinamidine synthase subunit PurQ compare
SGL_RS01900 -2.8 -6.6 GDP-L-fucose synthase compare
SGL_RS05440 -2.8 -2.6 ACP S-malonyltransferase compare
SGL_RS03840 -2.8 -3.0 adenylyl-sulfate kinase compare
SGL_RS12400 -2.8 -1.9 lysophospholipid acyltransferase family protein compare
SGL_RS13495 -2.7 -10.6 AarF/ABC1/UbiB kinase family protein compare
SGL_RS15620 -2.7 -3.1 cobyric acid synthase CobQ compare
SGL_RS06585 -2.6 -3.5 nitrate ABC transporter ATP-binding protein compare
SGL_RS16940 -2.6 -3.0 dephospho-CoA kinase compare
SGL_RS09385 -2.6 -2.4 2-carboxy-1,4-naphthoquinone phytyltransferase compare
SGL_RS14540 -2.6 -2.9 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR compare
SGL_RS14920 -2.6 -2.4 cation:proton antiporter compare
SGL_RS02260 -2.6 -2.9 HEAT repeat domain-containing protein compare
SGL_RS13535 -2.6 -2.9 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
SGL_RS16360 -2.5 -3.7 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
SGL_RS08790 -2.5 -2.9 carbohydrate ABC transporter permease compare
SGL_RS16100 -2.5 -7.6 heavy metal translocating P-type ATPase compare
SGL_RS14445 -2.5 -2.4 hypothetical protein compare
SGL_RS09720 -2.5 -2.4 beta-ketoacyl-ACP synthase compare
SGL_RS13910 -2.5 -5.6 phasin family protein compare
SGL_RS14025 -2.5 -10.9 gamma-glutamyl-phosphate reductase compare
SGL_RS14585 -2.5 -2.6 TolB family protein compare
SGL_RS03970 -2.4 -2.8 thiamine phosphate synthase compare
SGL_RS14335 -2.4 -2.3 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase compare
SGL_RS07840 -2.4 -2.5 SDR family NAD(P)-dependent oxidoreductase compare
SGL_RS06595 -2.4 -4.5 CmpA/NrtA family ABC transporter substrate-binding protein compare
SGL_RS06020 -2.3 -4.6 sugar ABC transporter permease compare
SGL_RS11035 -2.3 -3.6 LapA family protein compare
SGL_RS13370 -2.3 -3.3 exonuclease SbcCD subunit D compare
SGL_RS15560 -2.3 -2.1 dethiobiotin synthase compare
SGL_RS06675 -2.3 -4.6 ABC transporter ATP-binding protein compare
SGL_RS18300 -2.3 -3.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SGL_RS10775 -2.2 -7.1 DUF3326 domain-containing protein compare
SGL_RS04735 -2.2 -3.3 hypothetical protein compare
SGL_RS12235 -2.2 -2.9 aminopeptidase P N-terminal domain-containing protein compare
SGL_RS10320 -2.2 -2.5 ribosome biogenesis GTPase Der compare
SGL_RS12930 -2.1 -2.4 DUF1257 domain-containing protein compare
SGL_RS13905 -2.1 -5.3 hypothetical protein compare
SGL_RS04230 -2.1 -3.4 exonuclease subunit SbcC compare
SGL_RS05465 -2.1 -3.2 hypothetical protein compare
SGL_RS17685 -2.1 -8.7 ArsB/NhaD family transporter compare
SGL_RS13870 -2.1 -3.9 rRNA maturation RNase YbeY compare
SGL_RS05385 -2.1 -6.0 DUF4040 domain-containing protein compare
SGL_RS02145 -2.0 -9.4 metallophosphoesterase compare
SGL_RS05980 -2.0 -4.2 hypothetical protein compare
SGL_RS02580 -2.0 -2.4 DUF1818 family protein compare
SGL_RS12585 -2.0 -2.6 ABC transporter permease subunit compare
SGL_RS06590 -1.9 -4.6 nitrate ABC transporter permease compare
SGL_RS15200 -1.9 -1.9 hypothetical protein compare
SGL_RS12540 -1.9 -7.8 RNA polymerase sigma factor, RpoD/SigA family compare
SGL_RS17125 -1.9 -3.9 inositol monophosphatase family protein compare
SGL_RS09820 -1.9 -3.4 ribosome maturation factor RimM compare
SGL_RS02220 -1.9 -2.7 phosphoribosylformylglycinamidine synthase subunit PurL compare
SGL_RS07930 -1.9 -8.6 hypothetical protein compare
SGL_RS10130 -1.9 -12.0 fatty acid desaturase compare
SGL_RS08535 -1.9 -3.4 NIL domain-containing protein compare
SGL_RS13900 -1.9 -8.9 AI-2E family transporter compare
SGL_RS05470 -1.8 -2.9 dihydropteroate synthase compare
SGL_RS12340 -1.8 -9.9 hypothetical protein compare
SGL_RS10305 -1.8 -6.0 PIN/TRAM domain-containing protein compare
SGL_RS14430 -1.8 -4.0 cobalt ECF transporter T component CbiQ compare
SGL_RS16545 -1.8 -7.9 LdpA C-terminal domain-containing domain compare
SGL_RS08650 -1.8 -6.4 S-layer homology domain-containing protein compare
SGL_RS04510 -1.8 -5.3 DUF561 domain-containing protein compare
SGL_RS14105 -1.8 -2.8 2-succinylbenzoate--CoA ligase compare
SGL_RS14045 -1.8 -4.0 hypothetical protein compare
SGL_RS04720 -1.8 -1.2 iron uptake porin compare
SGL_RS07605 -1.8 -3.2 HEAT repeat domain-containing protein compare
SGL_RS13510 -1.7 -5.9 transglycosylase domain-containing protein compare
SGL_RS02475 -1.7 -2.0 YlxR family protein compare
SGL_RS03625 -1.7 -10.9 glycosyltransferase family 1 protein compare
SGL_RS12925 -1.7 -4.6 AAA family ATPase compare
SGL_RS09845 -1.7 -5.0 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
SGL_RS11510 -1.7 -3.1 dihydroneopterin aldolase compare
SGL_RS08175 -1.7 -2.4 serine hydrolase compare
SGL_RS17470 -1.7 -3.0 nickel pincer cofactor biosynthesis protein LarB compare
SGL_RS06430 -1.7 -1.8 glycosyltransferase family 2 protein compare
SGL_RS03190 -1.7 -2.0 universal stress protein compare
SGL_RS18170 -1.6 -1.9 PspA/IM30 family protein compare
SGL_RS14860 -1.6 -2.7 8-amino-7-oxononanoate synthase compare
SGL_RS06355 -1.6 -2.6 carbon dioxide-concentrating mechanism protein CcmK compare
SGL_RS04155 -1.6 -3.1 reverse transcriptase domain-containing protein compare
SGL_RS03425 -1.6 -1.7 precorrin-3B C(17)-methyltransferase compare
SGL_RS13195 -1.5 -4.4 Ig-like domain-containing protein compare
SGL_RS09970 -1.5 -1.8 DUF29 domain-containing protein compare
SGL_RS11240 -1.5 -1.9 photosystem I reaction center subunit IV compare
SGL_RS03790 -1.5 -2.9 GTPase ObgE compare
SGL_RS20180 -1.5 -1.6 membrane protein compare
SGL_RS02460 -1.5 -3.3 phosphate signaling complex protein PhoU compare
SGL_RS05880 -1.5 -2.6 sugar ABC transporter substrate-binding protein compare
SGL_RS09395 -1.4 -2.2 aldo/keto reductase compare
SGL_RS15865 -1.4 -3.3 septum site-determining protein MinD compare
SGL_RS03950 -1.4 -6.3 homocysteine biosynthesis protein compare
SGL_RS03550 -1.4 -10.0 CDP-glucose 4,6-dehydratase compare
SGL_RS06600 -1.4 -7.2 anthranilate phosphoribosyltransferase family protein compare
SGL_RS08710 -1.4 -2.9 folylpolyglutamate synthase/dihydrofolate synthase family protein compare
SGL_RS04775 -1.3 -4.4 alpha/beta hydrolase compare
SGL_RS19585 -1.3 -2.8 hypothetical protein compare
SGL_RS15700 -1.3 -5.2 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
SGL_RS17270 -1.3 -3.4 hypothetical protein compare
SGL_RS08275 -1.3 -1.7 tetratricopeptide repeat protein compare
SGL_RS14510 -1.3 -3.2 DUF3177 family protein compare
SGL_RS12575 -1.3 -2.3 riboflavin synthase compare
SGL_RS07870 -1.3 -2.3 Ycf51 family protein compare
SGL_RS18320 -1.3 -7.5 serine/threonine-protein kinase compare
SGL_RS06755 -1.3 -6.8 bacterioferritin-associated ferredoxin compare
SGL_RS08115 -1.3 -3.5 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS15655 -1.3 -9.5 asparaginase compare
SGL_RS17330 -1.3 -6.4 biosynthetic arginine decarboxylase compare
SGL_RS07170 -1.3 -1.7 glycine cleavage system protein GcvH compare
SGL_RS09975 -1.3 -2.6 DUF29 domain-containing protein compare
SGL_RS02850 -1.3 -4.7 uracil phosphoribosyltransferase compare
SGL_RS15370 -1.3 -3.3 DnaJ C-terminal domain-containing protein compare
SGL_RS06460 -1.2 -3.3 fatty acid desaturase compare
SGL_RS10155 -1.2 -2.5 hypothetical protein compare
SGL_RS13795 -1.2 -1.5 phosphohistidine phosphatase SixA compare
SGL_RS07940 -1.2 -3.5 type II secretion system protein compare
SGL_RS03450 -1.2 -4.5 permease compare
SGL_RS08080 -1.2 -2.7 Fur family transcriptional regulator compare
SGL_RS06440 -1.2 -4.1 NAD-dependent epimerase/dehydratase family protein compare
SGL_RS02520 -1.2 -2.9 thioredoxin-dependent thiol peroxidase compare
SGL_RS17405 -1.2 -3.9 L-2-hydroxyglutarate oxidase compare
SGL_RS14930 -1.1 -4.8 type I methionyl aminopeptidase compare
SGL_RS03870 -1.1 -5.8 histidinol dehydrogenase compare
SGL_RS03065 -1.1 -4.2 heat-inducible transcriptional repressor HrcA compare
SGL_RS12910 -1.1 -4.4 acetyl-CoA carboxylase, carboxyltransferase subunit beta compare
SGL_RS15425 -1.1 -4.0 cobalamin biosynthesis protein CobW compare
SGL_RS03090 -1.1 -8.1 ArsA family ATPase compare
SGL_RS03185 -1.1 -1.6 biotin--[acetyl-CoA-carboxylase] ligase compare
SGL_RS11495 -1.1 -1.6 Ig-like domain-containing protein compare
SGL_RS15305 -1.1 -4.4 ribonuclease HI compare
SGL_RS09890 -1.0 -3.8 DUF3007 family protein compare
SGL_RS04390 -1.0 -2.6 DUF433 domain-containing protein compare
SGL_RS05320 -1.0 -5.5 PBP1A family penicillin-binding protein compare
SGL_RS08605 -1.0 -2.8 DUF3120 domain-containing protein compare
SGL_RS13185 -1.0 -2.3 AI-2E family transporter compare
SGL_RS11655 -1.0 -1.4 iron export ABC transporter permease subunit FetB compare
SGL_RS01205 -1.0 -4.5 ParB/RepB/Spo0J family partition protein compare
SGL_RS15875 -1.0 -6.6 FHA domain-containing protein compare
SGL_RS16705 -1.0 -3.3 diadenylate cyclase CdaA compare
SGL_RS04580 -1.0 -2.1 DNA topoisomerase (ATP-hydrolyzing) subunit A compare
SGL_RS00315 -1.0 -1.4 hypothetical protein compare
SGL_RS11945 -1.0 -5.2 sirohydrochlorin chelatase compare
SGL_RS12920 -1.0 -1.2 hypothetical protein compare
SGL_RS08155 -0.9 -1.3 Spy/CpxP family protein refolding chaperone compare
SGL_RS06110 -0.9 -2.4 glycosyltransferase family 4 protein compare
SGL_RS11675 -0.9 -1.7 chromophore lyase CpcT/CpeT compare
SGL_RS00475 -0.9 -2.5 nucleotidyl transferase AbiEii/AbiGii toxin family protein compare
SGL_RS08495 -0.9 -4.9 DUF3370 domain-containing protein compare
SGL_RS17340 -0.9 -1.5 quinolinate synthase NadA compare
SGL_RS17305 -0.9 -1.6 pyrroline-5-carboxylate reductase compare
SGL_RS16950 -0.9 -3.3 phosphoketolase compare
SGL_RS16860 -0.9 -4.0 small ribosomal subunit biogenesis GTPase RsgA compare
SGL_RS12625 -0.9 -3.1 NAD(P)H-quinone oxidoreductase subunit 4 compare
SGL_RS12335 -0.9 -3.2 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS01200 -0.9 -3.3 ParA family protein compare
SGL_RS17515 -0.8 -3.3 SMC-Scp complex subunit ScpB compare
SGL_RS03495 -0.8 -2.4 metal-binding protein compare
SGL_RS11135 -0.8 -0.8 D-alanyl-D-alanine dipeptidase DdpX compare
SGL_RS10425 -0.8 -3.7 aromatic ring-hydroxylating dioxygenase subunit alpha compare
SGL_RS14905 -0.8 -2.1 30S ribosomal protein PSRP-3 compare


Specific Phenotypes

None in this experiment

For Synechocystis sp000284455 PCC 6803 in metal stress experiments

For metal stress Sodium m-arsenite across organisms