Experiment set1S159 for Synechocystis sp000284455 PCC 6803

Compare to:

growth in full media supplemented with 2mM sodum metaarsenite

200 most important genes:

  gene name fitness t score description  
SGL_RS11355 -8.4 -8.2 arsenite efflux transporter Acr3 compare
SGL_RS12870 -6.0 -4.1 YqeG family HAD IIIA-type phosphatase compare
SGL_RS03365 -5.4 -3.7 Ycf66 family protein compare
SGL_RS05375 -5.2 -3.5 hypothetical protein compare
SGL_RS05380 -5.1 -3.5 monovalent cation/H(+) antiporter subunit G compare
SGL_RS06130 -4.6 -3.1 anti-sigma regulatory factor compare
SGL_RS16915 -4.4 -4.2 trigger factor compare
SGL_RS03775 -4.4 -5.1 membrane protein compare
SGL_RS07935 -4.3 -5.1 hypothetical protein compare
SGL_RS12490 -4.3 -3.0 glutamate--cysteine ligase compare
SGL_RS16940 -4.2 -2.9 dephospho-CoA kinase compare
SGL_RS18180 -4.0 -5.3 ABC transporter permease compare
SGL_RS02375 -3.9 -10.2 DUF3086 domain-containing protein compare
SGL_RS03520 -3.9 -3.8 ABC transporter permease compare
SGL_RS02580 -3.9 -2.6 DUF1818 family protein compare
SGL_RS03540 -3.8 -9.2 ABC transporter ATP-binding protein compare
SGL_RS12030 -3.8 -2.6 extracellular solute-binding protein compare
SGL_RS05560 -3.8 -2.6 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS02260 -3.7 -2.5 HEAT repeat domain-containing protein compare
SGL_RS05370 -3.7 -2.7 Na+/H+ antiporter subunit E compare
SGL_RS10775 -3.6 -7.0 DUF3326 domain-containing protein compare
SGL_RS12770 -3.6 -3.5 uroporphyrinogen-III C-methyltransferase compare
SGL_RS06355 -3.6 -3.4 carbon dioxide-concentrating mechanism protein CcmK compare
SGL_RS13870 -3.6 -4.2 rRNA maturation RNase YbeY compare
SGL_RS05880 -3.6 -3.4 sugar ABC transporter substrate-binding protein compare
SGL_RS07200 -3.5 -2.4 LCP family protein compare
SGL_RS01905 -3.5 -13.1 GDP-mannose 4,6-dehydratase compare
SGL_RS05385 -3.5 -6.6 DUF4040 domain-containing protein compare
SGL_RS16880 -3.5 -3.3 3'(2'),5'-bisphosphate nucleotidase CysQ compare
SGL_RS14920 -3.5 -2.4 cation:proton antiporter compare
SGL_RS15045 -3.4 -6.8 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS14425 -3.4 -4.0 energy-coupling factor ABC transporter ATP-binding protein compare
SGL_RS14430 -3.4 -3.3 cobalt ECF transporter T component CbiQ compare
SGL_RS13555 -3.3 -5.0 aldehyde oxygenase (deformylating) compare
SGL_RS13685 -3.3 -8.0 ABC transporter ATP-binding protein compare
SGL_RS03625 -3.3 -10.5 glycosyltransferase family 1 protein compare
SGL_RS13855 -3.3 -6.4 hypothetical protein compare
SGL_RS05440 -3.2 -2.2 ACP S-malonyltransferase compare
SGL_RS06430 -3.1 -2.1 glycosyltransferase family 2 protein compare
SGL_RS17305 -3.1 -2.1 pyrroline-5-carboxylate reductase compare
SGL_RS17520 -3.1 -3.0 DUF3352 domain-containing protein compare
SGL_RS05390 -3.0 -4.7 Na(+)/H(+) antiporter subunit B compare
SGL_RS17650 -3.0 -2.9 hypothetical protein compare
SGL_RS06020 -3.0 -4.5 sugar ABC transporter permease compare
SGL_RS04510 -3.0 -6.8 DUF561 domain-containing protein compare
SGL_RS01900 -3.0 -5.9 GDP-L-fucose synthase compare
SGL_RS11000 -3.0 -4.5 sulfate adenylyltransferase compare
SGL_RS03790 -3.0 -2.8 GTPase ObgE compare
SGL_RS05980 -2.9 -3.9 hypothetical protein compare
SGL_RS11135 -2.9 -2.7 D-alanyl-D-alanine dipeptidase DdpX compare
SGL_RS10305 -2.8 -6.8 PIN/TRAM domain-containing protein compare
SGL_RS02665 -2.8 -3.1 nickel pincer cofactor biosynthesis protein LarC compare
SGL_RS03560 -2.8 -10.0 class I SAM-dependent methyltransferase compare
SGL_RS05470 -2.8 -3.2 dihydropteroate synthase compare
SGL_RS03840 -2.8 -3.1 adenylyl-sulfate kinase compare
SGL_RS03550 -2.8 -13.6 CDP-glucose 4,6-dehydratase compare
SGL_RS15530 -2.8 -2.6 phosphoribosylformylglycinamidine synthase subunit PurQ compare
SGL_RS12235 -2.7 -3.1 aminopeptidase P N-terminal domain-containing protein compare
SGL_RS07840 -2.7 -2.5 SDR family NAD(P)-dependent oxidoreductase compare
SGL_RS16100 -2.7 -7.3 heavy metal translocating P-type ATPase compare
SGL_RS08710 -2.7 -3.5 folylpolyglutamate synthase/dihydrofolate synthase family protein compare
SGL_RS05465 -2.6 -3.4 hypothetical protein compare
SGL_RS03970 -2.6 -2.5 thiamine phosphate synthase compare
SGL_RS07870 -2.6 -3.4 Ycf51 family protein compare
SGL_RS10320 -2.6 -2.4 ribosome biogenesis GTPase Der compare
SGL_RS12585 -2.6 -1.8 ABC transporter permease subunit compare
SGL_RS11835 -2.6 -2.4 transcription antitermination factor NusB compare
SGL_RS13055 -2.6 -2.4 protein translocase subunit SecF compare
SGL_RS12400 -2.5 -2.4 lysophospholipid acyltransferase family protein compare
SGL_RS06590 -2.5 -4.9 nitrate ABC transporter permease compare
SGL_RS15435 -2.5 -10.4 PD40 domain-containing protein compare
SGL_RS09845 -2.5 -5.5 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
SGL_RS14860 -2.5 -2.8 8-amino-7-oxononanoate synthase compare
SGL_RS09720 -2.4 -2.3 beta-ketoacyl-ACP synthase compare
SGL_RS11510 -2.4 -3.6 dihydroneopterin aldolase compare
SGL_RS09820 -2.4 -2.8 ribosome maturation factor RimM compare
SGL_RS14540 -2.4 -1.6 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR compare
SGL_RS14335 -2.4 -2.2 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase compare
SGL_RS06585 -2.3 -3.1 nitrate ABC transporter ATP-binding protein compare
SGL_RS14435 -2.3 -2.2 cobalt transporter CbiM compare
SGL_RS02220 -2.3 -3.0 phosphoribosylformylglycinamidine synthase subunit PurL compare
SGL_RS03425 -2.3 -1.5 precorrin-3B C(17)-methyltransferase compare
SGL_RS06675 -2.2 -4.3 ABC transporter ATP-binding protein compare
SGL_RS03585 -2.2 -7.7 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS08790 -2.2 -2.9 carbohydrate ABC transporter permease compare
SGL_RS13495 -2.2 -9.9 AarF/ABC1/UbiB kinase family protein compare
SGL_RS03085 -2.2 -5.9 DUF2862 domain-containing protein compare
SGL_RS16545 -2.2 -10.2 LdpA C-terminal domain-containing domain compare
SGL_RS03555 -2.1 -11.3 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS03545 -2.1 -6.0 glucose-1-phosphate cytidylyltransferase compare
SGL_RS15700 -2.1 -8.5 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
SGL_RS12575 -2.1 -2.7 riboflavin synthase compare
SGL_RS03250 -2.1 -4.4 tRNA (guanosine(37)-N1)-methyltransferase TrmD compare
SGL_RS14105 -2.1 -2.7 2-succinylbenzoate--CoA ligase compare
SGL_RS16360 -2.1 -3.5 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
SGL_RS18300 -2.0 -3.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SGL_RS09385 -2.0 -2.3 2-carboxy-1,4-naphthoquinone phytyltransferase compare
SGL_RS08535 -2.0 -3.4 NIL domain-containing protein compare
SGL_RS17685 -2.0 -9.3 ArsB/NhaD family transporter compare
SGL_RS12335 -1.9 -5.3 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS15560 -1.9 -1.8 dethiobiotin synthase compare
SGL_RS03590 -1.9 -7.1 ATP-grasp domain-containing protein compare
SGL_RS17330 -1.9 -8.1 biosynthetic arginine decarboxylase compare
SGL_RS02955 -1.9 -3.9 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS08115 -1.9 -3.6 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS03265 -1.9 -2.1 photosystem II complex extrinsic protein PsbU compare
SGL_RS13535 -1.9 -2.7 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
SGL_RS10130 -1.9 -9.7 fatty acid desaturase compare
SGL_RS06595 -1.8 -4.2 CmpA/NrtA family ABC transporter substrate-binding protein compare
SGL_RS11985 -1.8 -1.8 LysR family transcriptional regulator compare
SGL_RS09395 -1.8 -2.6 aldo/keto reductase compare
SGL_RS04775 -1.8 -3.9 alpha/beta hydrolase compare
SGL_RS17125 -1.8 -3.7 inositol monophosphatase family protein compare
SGL_RS04720 -1.8 -1.2 iron uptake porin compare
SGL_RS15655 -1.8 -10.6 asparaginase compare
SGL_RS13910 -1.7 -3.6 phasin family protein compare
SGL_RS13905 -1.7 -5.2 hypothetical protein compare
SGL_RS13195 -1.7 -4.7 Ig-like domain-containing protein compare
SGL_RS13900 -1.7 -10.0 AI-2E family transporter compare
SGL_RS13550 -1.7 -2.0 long-chain acyl-[acyl-carrier-protein] reductase compare
SGL_RS14445 -1.7 -2.5 hypothetical protein compare
SGL_RS08175 -1.6 -2.9 serine hydrolase compare
SGL_RS03185 -1.6 -2.0 biotin--[acetyl-CoA-carboxylase] ligase compare
SGL_RS07605 -1.6 -2.9 HEAT repeat domain-containing protein compare
SGL_RS02145 -1.6 -7.3 metallophosphoesterase compare
SGL_RS04490 -1.6 -2.2 2TM domain-containing protein compare
SGL_RS16735 -1.6 -2.0 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
SGL_RS14045 -1.6 -4.0 hypothetical protein compare
SGL_RS15865 -1.5 -2.6 septum site-determining protein MinD compare
SGL_RS06440 -1.5 -3.3 NAD-dependent epimerase/dehydratase family protein compare
SGL_RS17470 -1.5 -2.7 nickel pincer cofactor biosynthesis protein LarB compare
SGL_RS12745 -1.5 -3.0 glycine cleavage system aminomethyltransferase GcvT compare
SGL_RS00830 -1.5 -3.6 hypothetical protein compare
SGL_RS06755 -1.5 -6.4 bacterioferritin-associated ferredoxin compare
SGL_RS03505 -1.5 -9.9 exopolysaccharide transport family protein compare
SGL_RS12910 -1.5 -5.7 acetyl-CoA carboxylase, carboxyltransferase subunit beta compare
SGL_RS13510 -1.5 -5.1 transglycosylase domain-containing protein compare
SGL_RS04525 -1.4 -2.4 photosynthesis system II assembly factor Ycf48 compare
SGL_RS14905 -1.4 -3.3 30S ribosomal protein PSRP-3 compare
SGL_RS02460 -1.4 -2.4 phosphate signaling complex protein PhoU compare
SGL_RS11035 -1.4 -4.2 LapA family protein compare
SGL_RS03950 -1.4 -6.0 homocysteine biosynthesis protein compare
SGL_RS14585 -1.4 -2.3 TolB family protein compare
SGL_RS12930 -1.4 -1.8 DUF1257 domain-containing protein compare
SGL_RS09160 -1.4 -2.5 thioredoxin family protein compare
SGL_RS12540 -1.4 -6.2 RNA polymerase sigma factor, RpoD/SigA family compare
SGL_RS19585 -1.3 -2.9 hypothetical protein compare
SGL_RS02520 -1.3 -3.3 thioredoxin-dependent thiol peroxidase compare
SGL_RS09890 -1.3 -4.2 DUF3007 family protein compare
SGL_RS02850 -1.3 -4.6 uracil phosphoribosyltransferase compare
SGL_RS09970 -1.3 -2.1 DUF29 domain-containing protein compare
SGL_RS03275 -1.3 -9.0 UDP-glucose/GDP-mannose dehydrogenase family protein compare
SGL_RS17405 -1.3 -5.4 L-2-hydroxyglutarate oxidase compare
SGL_RS08495 -1.3 -6.4 DUF3370 domain-containing protein compare
SGL_RS09305 -1.3 -4.0 adenosyl-hopene transferase HpnH compare
SGL_RS14930 -1.3 -4.8 type I methionyl aminopeptidase compare
SGL_RS16950 -1.3 -5.7 phosphoketolase compare
SGL_RS15130 -1.2 -7.7 dTDP-glucose 4,6-dehydratase compare
SGL_RS12340 -1.2 -7.3 hypothetical protein compare
SGL_RS13370 -1.2 -2.4 exonuclease SbcCD subunit D compare
SGL_RS03450 -1.2 -4.7 permease compare
SGL_RS03690 -1.2 -9.1 glycosyltransferase compare
SGL_RS15875 -1.2 -8.2 FHA domain-containing protein compare
SGL_RS10155 -1.2 -3.1 hypothetical protein compare
SGL_RS15370 -1.2 -3.3 DnaJ C-terminal domain-containing protein compare
SGL_RS03640 -1.2 -6.7 UDP-glucose 4-epimerase GalE compare
SGL_RS04230 -1.2 -2.5 exonuclease subunit SbcC compare
SGL_RS03675 -1.2 -2.9 hypothetical protein compare
SGL_RS13465 -1.2 -4.9 class II fumarate hydratase compare
SGL_RS03745 -1.2 -7.5 glycosyltransferase family 4 protein compare
SGL_RS16860 -1.2 -4.4 small ribosomal subunit biogenesis GTPase RsgA compare
SGL_RS03685 -1.2 -5.8 glycosyltransferase compare
SGL_RS11945 -1.2 -6.1 sirohydrochlorin chelatase compare
SGL_RS10480 -1.2 -7.4 metallophosphoesterase family protein compare
SGL_RS14025 -1.2 -6.0 gamma-glutamyl-phosphate reductase compare
SGL_RS05210 -1.2 -4.8 SLBB domain-containing protein compare
SGL_RS13670 -1.1 -2.3 thioredoxin compare
SGL_RS03650 -1.1 -1.4 FkbM family methyltransferase compare
SGL_RS08765 -1.1 -1.3 2-phosphosulfolactate phosphatase family protein compare
SGL_RS18170 -1.1 -1.3 PspA/IM30 family protein compare
SGL_RS06110 -1.1 -3.2 glycosyltransferase family 4 protein compare
SGL_RS15425 -1.0 -3.5 cobalamin biosynthesis protein CobW compare
SGL_RS11025 -1.0 -3.9 oxidoreductase compare
SGL_RS03635 -1.0 -4.5 glycosyltransferase family 4 protein compare
SGL_RS08650 -1.0 -5.0 S-layer homology domain-containing protein compare
SGL_RS03740 -1.0 -5.3 hypothetical protein compare
SGL_RS18095 -1.0 -4.3 TIGR03943 family protein compare
SGL_RS03430 -1.0 -3.9 DUF4335 domain-containing protein compare
SGL_RS17175 -1.0 -1.7 allophycocyanin subunit beta compare
SGL_RS04735 -1.0 -2.1 hypothetical protein compare
SGL_RS03630 -1.0 -3.6 glycosyltransferase family 2 protein compare
SGL_RS06460 -1.0 -2.3 fatty acid desaturase compare
SGL_RS18320 -1.0 -5.6 serine/threonine-protein kinase compare
SGL_RS03190 -1.0 -1.5 universal stress protein compare
SGL_RS08275 -0.9 -1.4 tetratricopeptide repeat protein compare
SGL_RS15790 -0.9 -3.8 hypothetical protein compare
SGL_RS08155 -0.9 -1.7 Spy/CpxP family protein refolding chaperone compare
SGL_RS01205 -0.9 -4.2 ParB/RepB/Spo0J family partition protein compare
SGL_RS07930 -0.9 -4.6 hypothetical protein compare
SGL_RS03870 -0.9 -6.1 histidinol dehydrogenase compare


Specific Phenotypes

None in this experiment

For Synechocystis sp000284455 PCC 6803 in metal stress experiments

For metal stress Sodium m-arsenite across organisms