Experiment set1S157 for Synechocystis sp000284455 PCC 6803

Compare to:

growth in full media supplemented with 5 .M CuSO4

200 most important genes:

  gene name fitness t score description  
SGL_RS13910 -7.6 -5.2 phasin family protein compare
SGL_RS03550 -7.5 -11.4 CDP-glucose 4,6-dehydratase compare
SGL_RS03625 -6.8 -9.5 glycosyltransferase family 1 protein compare
SGL_RS03520 -6.7 -4.6 ABC transporter permease compare
SGL_RS03545 -6.4 -6.3 glucose-1-phosphate cytidylyltransferase compare
SGL_RS03540 -6.2 -6.1 ABC transporter ATP-binding protein compare
SGL_RS03590 -5.8 -9.0 ATP-grasp domain-containing protein compare
SGL_RS03585 -5.5 -11.2 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS12870 -5.1 -5.0 YqeG family HAD IIIA-type phosphatase compare
SGL_RS03555 -5.1 -12.0 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS15130 -4.9 -8.1 dTDP-glucose 4,6-dehydratase compare
SGL_RS14905 -4.7 -4.5 30S ribosomal protein PSRP-3 compare
SGL_RS03560 -4.6 -9.5 class I SAM-dependent methyltransferase compare
SGL_RS17125 -4.6 -4.4 inositol monophosphatase family protein compare
SGL_RS07130 -4.6 -12.3 AAA-like domain-containing protein compare
SGL_RS06130 -4.5 -3.1 anti-sigma regulatory factor compare
SGL_RS05435 -4.5 -3.1 heavy metal translocating P-type ATPase compare
SGL_RS03365 -4.5 -4.3 Ycf66 family protein compare
SGL_RS02375 -4.3 -9.1 DUF3086 domain-containing protein compare
SGL_RS02665 -4.3 -2.9 nickel pincer cofactor biosynthesis protein LarC compare
SGL_RS13510 -4.2 -5.0 transglycosylase domain-containing protein compare
SGL_RS17405 -4.2 -7.6 L-2-hydroxyglutarate oxidase compare
SGL_RS19585 -4.2 -3.5 hypothetical protein compare
SGL_RS13870 -4.2 -2.9 rRNA maturation RNase YbeY compare
SGL_RS14425 -4.2 -2.9 energy-coupling factor ABC transporter ATP-binding protein compare
SGL_RS07565 -4.1 -9.1 hypothetical protein compare
SGL_RS12770 -4.1 -2.8 uroporphyrinogen-III C-methyltransferase compare
SGL_RS00195 -4.0 -13.5 glycosyltransferase family 2 protein compare
SGL_RS13465 -4.0 -9.9 class II fumarate hydratase compare
SGL_RS15045 -4.0 -6.0 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS03840 -3.9 -2.7 adenylyl-sulfate kinase compare
SGL_RS02460 -3.9 -3.9 phosphate signaling complex protein PhoU compare
SGL_RS12100 -3.9 -23.4 AAA-like domain-containing protein compare
SGL_RS05980 -3.9 -2.7 hypothetical protein compare
SGL_RS12745 -3.8 -2.6 glycine cleavage system aminomethyltransferase GcvT compare
SGL_RS16670 -3.7 -13.9 DUF5942 domain-containing protein compare
SGL_RS12030 -3.7 -2.6 extracellular solute-binding protein compare
SGL_RS12490 -3.6 -4.2 glutamate--cysteine ligase compare
SGL_RS13535 -3.6 -2.4 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
SGL_RS11000 -3.5 -3.4 sulfate adenylyltransferase compare
SGL_RS17650 -3.5 -2.4 hypothetical protein compare
SGL_RS15710 -3.5 -19.6 HD family phosphohydrolase compare
SGL_RS09295 -3.4 -15.2 alpha/beta hydrolase compare
SGL_RS14430 -3.4 -3.3 cobalt ECF transporter T component CbiQ compare
SGL_RS04775 -3.4 -4.2 alpha/beta hydrolase compare
SGL_RS07840 -3.4 -2.3 SDR family NAD(P)-dependent oxidoreductase compare
SGL_RS07200 -3.4 -2.3 LCP family protein compare
SGL_RS05880 -3.4 -3.3 sugar ABC transporter substrate-binding protein compare
SGL_RS13560 -3.3 -16.3 glucose-1-phosphate thymidylyltransferase compare
SGL_RS10775 -3.3 -7.7 DUF3326 domain-containing protein compare
SGL_RS02305 -3.2 -7.1 NAD-dependent malic enzyme compare
SGL_RS00220 -3.2 -19.7 oligosaccharide flippase family protein compare
SGL_RS17520 -3.2 -2.2 DUF3352 domain-containing protein compare
SGL_RS05440 -3.1 -2.1 ACP S-malonyltransferase compare
SGL_RS04510 -3.1 -6.5 DUF561 domain-containing protein compare
SGL_RS11955 -3.1 -3.0 aminomethyl-transferring glycine dehydrogenase compare
SGL_RS10480 -3.1 -9.0 metallophosphoesterase family protein compare
SGL_RS16100 -3.1 -6.8 heavy metal translocating P-type ATPase compare
SGL_RS15840 -3.1 -11.8 class A beta-lactamase compare
SGL_RS00190 -3.0 -13.9 sulfotransferase compare
SGL_RS08175 -3.0 -2.1 serine hydrolase compare
SGL_RS15425 -3.0 -6.6 cobalamin biosynthesis protein CobW compare
SGL_RS06430 -3.0 -2.0 glycosyltransferase family 2 protein compare
SGL_RS10245 -3.0 -8.4 glycoside hydrolase family protein compare
SGL_RS14435 -3.0 -1.9 cobalt transporter CbiM compare
SGL_RS06675 -3.0 -4.8 ABC transporter ATP-binding protein compare
SGL_RS11305 -2.9 -5.2 carboxylating nicotinate-nucleotide diphosphorylase compare
SGL_RS03670 -2.9 -7.0 glycosyltransferase compare
SGL_RS14540 -2.9 -2.8 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR compare
SGL_RS16545 -2.9 -11.2 LdpA C-terminal domain-containing domain compare
SGL_RS05560 -2.9 -2.8 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS07870 -2.9 -3.3 Ycf51 family protein compare
SGL_RS05210 -2.9 -6.6 SLBB domain-containing protein compare
SGL_RS15620 -2.8 -2.7 cobyric acid synthase CobQ compare
SGL_RS08710 -2.8 -2.7 folylpolyglutamate synthase/dihydrofolate synthase family protein compare
SGL_RS09905 -2.8 -1.9 biotin/lipoate A/B protein ligase family protein compare
SGL_RS07170 -2.8 -2.6 glycine cleavage system protein GcvH compare
SGL_RS10130 -2.8 -10.2 fatty acid desaturase compare
SGL_RS03675 -2.8 -4.3 hypothetical protein compare
SGL_RS06020 -2.8 -4.5 sugar ABC transporter permease compare
SGL_RS13495 -2.7 -9.8 AarF/ABC1/UbiB kinase family protein compare
SGL_RS03640 -2.7 -6.5 UDP-glucose 4-epimerase GalE compare
SGL_RS08790 -2.7 -2.6 carbohydrate ABC transporter permease compare
SGL_RS03630 -2.7 -5.9 glycosyltransferase family 2 protein compare
SGL_RS05470 -2.7 -3.1 dihydropteroate synthase compare
SGL_RS03635 -2.7 -7.1 glycosyltransferase family 4 protein compare
SGL_RS11135 -2.7 -2.2 D-alanyl-D-alanine dipeptidase DdpX compare
SGL_RS15530 -2.7 -2.5 phosphoribosylformylglycinamidine synthase subunit PurQ compare
SGL_RS12575 -2.6 -2.5 riboflavin synthase compare
SGL_RS03970 -2.6 -2.5 thiamine phosphate synthase compare
SGL_RS11760 -2.6 -8.7 radical SAM protein compare
SGL_RS00245 -2.6 -15.4 glycosyltransferase compare
SGL_RS17330 -2.6 -8.6 biosynthetic arginine decarboxylase compare
SGL_RS03655 -2.6 -5.7 glycosyltransferase family 2 protein compare
SGL_RS14860 -2.5 -2.4 8-amino-7-oxononanoate synthase compare
SGL_RS14930 -2.5 -6.0 type I methionyl aminopeptidase compare
SGL_RS12335 -2.5 -5.0 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS18365 -2.5 -11.3 glycosyltransferase family 9 protein compare
SGL_RS16360 -2.5 -3.3 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
SGL_RS03505 -2.5 -14.5 exopolysaccharide transport family protein compare
SGL_RS17685 -2.5 -7.2 ArsB/NhaD family transporter compare
SGL_RS02220 -2.5 -2.4 phosphoribosylformylglycinamidine synthase subunit PurL compare
SGL_RS07605 -2.5 -3.6 HEAT repeat domain-containing protein compare
SGL_RS03685 -2.5 -11.0 glycosyltransferase compare
SGL_RS10320 -2.5 -2.3 ribosome biogenesis GTPase Der compare
SGL_RS09845 -2.4 -5.6 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
SGL_RS15560 -2.4 -1.6 dethiobiotin synthase compare
SGL_RS11510 -2.4 -3.2 dihydroneopterin aldolase compare
SGL_RS15700 -2.4 -8.8 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
SGL_RS14445 -2.4 -2.3 hypothetical protein compare
SGL_RS02145 -2.3 -9.8 metallophosphoesterase compare
SGL_RS13855 -2.3 -6.1 hypothetical protein compare
SGL_RS13195 -2.3 -5.0 Ig-like domain-containing protein compare
SGL_RS12560 -2.3 -11.1 ABC transporter permease compare
SGL_RS08155 -2.3 -2.4 Spy/CpxP family protein refolding chaperone compare
SGL_RS03605 -2.3 -11.6 cephalosporin hydroxylase family protein compare
SGL_RS09305 -2.3 -5.5 adenosyl-hopene transferase HpnH compare
SGL_RS09385 -2.2 -2.1 2-carboxy-1,4-naphthoquinone phytyltransferase compare
SGL_RS05260 -2.2 -5.8 hypothetical protein compare
SGL_RS02580 -2.2 -2.5 DUF1818 family protein compare
SGL_RS18300 -2.2 -2.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SGL_RS07580 -2.2 -8.6 exopolysaccharide biosynthesis protein compare
SGL_RS13245 -2.2 -6.7 DUF3747 domain-containing protein compare
SGL_RS09395 -2.1 -2.8 aldo/keto reductase compare
SGL_RS00225 -2.1 -15.0 glycosyltransferase compare
SGL_RS03005 -2.1 -5.3 nucleoside recognition domain-containing protein compare
SGL_RS03450 -2.0 -6.0 permease compare
SGL_RS17305 -2.0 -2.3 pyrroline-5-carboxylate reductase compare
SGL_RS07570 -2.0 -7.1 ABC transporter permease compare
SGL_RS14105 -2.0 -2.6 2-succinylbenzoate--CoA ligase compare
SGL_RS13285 -2.0 -8.3 Sll0314/Alr1548 family TPR repeat-containing protein compare
SGL_RS08095 -2.0 -12.3 peptide ABC transporter substrate-binding protein compare
SGL_RS12910 -2.0 -6.1 acetyl-CoA carboxylase, carboxyltransferase subunit beta compare
SGL_RS09530 -1.9 -5.4 glycosyltransferase compare
SGL_RS12755 -1.9 -8.8 IMS domain-containing protein compare
SGL_RS14180 -1.9 -7.2 phosphate ABC transporter ATP-binding protein PstB compare
SGL_RS04360 -1.9 -8.4 5-formyltetrahydrofolate cyclo-ligase compare
SGL_RS03790 -1.9 -3.0 GTPase ObgE compare
SGL_RS18095 -1.9 -6.6 TIGR03943 family protein compare
SGL_RS14195 -1.9 -3.8 phosphate ABC transporter permease subunit PstC compare
SGL_RS05330 -1.9 -11.4 ABC transporter ATP-binding protein compare
SGL_RS15655 -1.9 -10.0 asparaginase compare
SGL_RS02335 -1.9 -11.4 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
SGL_RS13175 -1.8 -4.2 GerMN domain-containing protein compare
SGL_RS15535 -1.8 -8.1 EamA family transporter compare
SGL_RS09110 -1.8 -4.5 squalene--hopene cyclase compare
SGL_RS18230 -1.8 -3.7 DUF2993 domain-containing protein compare
SGL_RS18320 -1.8 -9.2 serine/threonine-protein kinase compare
SGL_RS18100 -1.8 -3.7 SH3 domain-containing protein compare
SGL_RS07935 -1.8 -3.8 hypothetical protein compare
SGL_RS06920 -1.8 -8.3 serine/threonine protein kinase compare
SGL_RS16950 -1.7 -7.3 phosphoketolase compare
SGL_RS03000 -1.7 -4.7 spore maturation protein compare
SGL_RS14185 -1.7 -4.9 phosphate ABC transporter ATP-binding protein PstB compare
SGL_RS17470 -1.7 -2.9 nickel pincer cofactor biosynthesis protein LarB compare
SGL_RS02795 -1.7 -6.3 flavin prenyltransferase UbiX compare
SGL_RS06440 -1.7 -4.6 NAD-dependent epimerase/dehydratase family protein compare
SGL_RS03275 -1.7 -9.1 UDP-glucose/GDP-mannose dehydrogenase family protein compare
SGL_RS11885 -1.7 -5.1 fatty acid desaturase compare
SGL_RS04720 -1.6 -1.1 iron uptake porin compare
SGL_RS03420 -1.6 -5.6 UbiD family decarboxylase compare
SGL_RS09720 -1.6 -2.8 beta-ketoacyl-ACP synthase compare
SGL_RS00830 -1.6 -3.4 hypothetical protein compare
SGL_RS06800 -1.6 -9.8 glutathione synthase compare
SGL_RS13055 -1.6 -2.1 protein translocase subunit SecF compare
SGL_RS12400 -1.6 -2.5 lysophospholipid acyltransferase family protein compare
SGL_RS00235 -1.6 -9.5 cellulose synthase operon protein YhjQ/BcsQ compare
SGL_RS14920 -1.6 -2.2 cation:proton antiporter compare
SGL_RS12585 -1.6 -2.7 ABC transporter permease subunit compare
SGL_RS04390 -1.6 -3.1 DUF433 domain-containing protein compare
SGL_RS12540 -1.6 -6.4 RNA polymerase sigma factor, RpoD/SigA family compare
SGL_RS10360 -1.6 -2.8 hypothetical protein compare
SGL_RS18180 -1.5 -4.7 ABC transporter permease compare
SGL_RS16880 -1.5 -1.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
SGL_RS11610 -1.5 -4.8 class I SAM-dependent methyltransferase compare
SGL_RS13370 -1.5 -2.7 exonuclease SbcCD subunit D compare
SGL_RS16865 -1.5 -3.2 sulfurtransferase TusA family protein compare
SGL_RS10305 -1.5 -4.1 PIN/TRAM domain-containing protein compare
SGL_RS05640 -1.5 -9.8 ABC transporter ATP-binding protein compare
SGL_RS11395 -1.5 -7.3 TlyA family RNA methyltransferase compare
SGL_RS03190 -1.5 -2.0 universal stress protein compare
SGL_RS07285 -1.5 -8.5 N-acetylmuramoyl-L-alanine amidase compare
SGL_RS08895 -1.5 -8.0 FAD-dependent oxidoreductase compare
SGL_RS01995 -1.5 -5.9 biopolymer transporter ExbD compare
SGL_RS16940 -1.5 -2.2 dephospho-CoA kinase compare
SGL_RS01900 -1.4 -5.1 GDP-L-fucose synthase compare
SGL_RS14320 -1.4 -8.1 site-2 protease family protein compare
SGL_RS15435 -1.4 -6.7 PD40 domain-containing protein compare
SGL_RS03185 -1.4 -1.9 biotin--[acetyl-CoA-carboxylase] ligase compare
SGL_RS15595 -1.4 -10.6 ABC transporter ATP-binding protein compare
SGL_RS04995 -1.4 -3.1 hypothetical protein compare
SGL_RS02260 -1.4 -1.9 HEAT repeat domain-containing protein compare
SGL_RS07545 -1.4 -4.6 serine/threonine-protein phosphatase compare
SGL_RS00210 -1.4 -6.5 hypothetical protein compare
SGL_RS13865 -1.4 -7.3 DUF3285 domain-containing protein compare
SGL_RS14190 -1.3 -5.3 phosphate ABC transporter permease PstA compare
SGL_RS17735 -1.3 -6.9 hypothetical protein compare
SGL_RS04230 -1.3 -2.7 exonuclease subunit SbcC compare
SGL_RS14575 -1.3 -1.4 RNA-binding protein compare
SGL_RS10400 -1.3 -6.1 LCP family protein compare


Specific Phenotypes

None in this experiment

For Synechocystis sp000284455 PCC 6803 in metal stress experiments

For metal stress Copper (II) sulfate pentahydrate across organisms