Experiment set1S144 for Synechocystis sp000284455 PCC 6803

Compare to:

Arg 10 mM as N source, buffered with 20 mM TES pH8

200 most important genes:

  gene name fitness t score description  
SGL_RS13910 -7.4 -5.1 phasin family protein compare
SGL_RS04510 -7.0 -4.8 DUF561 domain-containing protein compare
SGL_RS09430 -6.0 -17.2 leucyl aminopeptidase compare
SGL_RS16705 -5.7 -3.9 diadenylate cyclase CdaA compare
SGL_RS16545 -5.5 -9.2 LdpA C-terminal domain-containing domain compare
SGL_RS15700 -5.2 -9.4 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
SGL_RS15655 -5.1 -13.2 asparaginase compare
SGL_RS15045 -4.8 -3.3 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS05465 -4.8 -3.3 hypothetical protein compare
SGL_RS16880 -4.6 -3.2 3'(2'),5'-bisphosphate nucleotidase CysQ compare
SGL_RS07200 -4.6 -4.4 LCP family protein compare
SGL_RS03365 -4.5 -4.4 Ycf66 family protein compare
SGL_RS04775 -4.5 -5.9 alpha/beta hydrolase compare
SGL_RS16670 -4.5 -13.0 DUF5942 domain-containing protein compare
SGL_RS03840 -4.5 -3.1 adenylyl-sulfate kinase compare
SGL_RS11170 -4.3 -22.1 L-glutamate gamma-semialdehyde dehydrogenase compare
SGL_RS02955 -4.2 -3.9 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS18325 -4.2 -10.4 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS02475 -4.2 -2.6 YlxR family protein compare
SGL_RS10775 -4.2 -6.9 DUF3326 domain-containing protein compare
SGL_RS12770 -4.1 -2.8 uroporphyrinogen-III C-methyltransferase compare
SGL_RS06130 -4.1 -2.8 anti-sigma regulatory factor compare
SGL_RS13465 -4.0 -7.6 class II fumarate hydratase compare
SGL_RS07675 -4.0 -4.7 HpsJ family protein compare
SGL_RS05980 -4.0 -2.7 hypothetical protein compare
SGL_RS03540 -3.9 -6.5 ABC transporter ATP-binding protein compare
SGL_RS14425 -3.8 -2.6 energy-coupling factor ABC transporter ATP-binding protein compare
SGL_RS05880 -3.8 -4.4 sugar ABC transporter substrate-binding protein compare
SGL_RS17500 -3.7 -5.6 DUF370 domain-containing protein compare
SGL_RS10130 -3.7 -15.2 fatty acid desaturase compare
SGL_RS07180 -3.7 -5.6 carboxynorspermidine decarboxylase compare
SGL_RS17520 -3.5 -2.4 DUF3352 domain-containing protein compare
SGL_RS12490 -3.5 -4.1 glutamate--cysteine ligase compare
SGL_RS12745 -3.4 -2.4 glycine cleavage system aminomethyltransferase GcvT compare
SGL_RS14920 -3.4 -3.3 cation:proton antiporter compare
SGL_RS03090 -3.4 -12.7 ArsA family ATPase compare
SGL_RS15840 -3.3 -9.5 class A beta-lactamase compare
SGL_RS17085 -3.3 -16.5 TIGR00300 family protein compare
SGL_RS11135 -3.3 -2.1 D-alanyl-D-alanine dipeptidase DdpX compare
SGL_RS11955 -3.3 -2.2 aminomethyl-transferring glycine dehydrogenase compare
SGL_RS16950 -3.2 -8.7 phosphoketolase compare
SGL_RS06430 -3.2 -3.1 glycosyltransferase family 2 protein compare
SGL_RS14430 -3.2 -4.3 cobalt ECF transporter T component CbiQ compare
SGL_RS12030 -3.1 -2.2 extracellular solute-binding protein compare
SGL_RS13535 -3.1 -3.0 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
SGL_RS04215 -3.1 -4.2 MlaE family lipid ABC transporter permease subunit compare
SGL_RS16735 -3.1 -2.1 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
SGL_RS10320 -3.1 -2.1 ribosome biogenesis GTPase Der compare
SGL_RS09905 -3.1 -2.1 biotin/lipoate A/B protein ligase family protein compare
SGL_RS04390 -3.0 -3.9 DUF433 domain-containing protein compare
SGL_RS02665 -3.0 -2.0 nickel pincer cofactor biosynthesis protein LarC compare
SGL_RS06020 -3.0 -5.3 sugar ABC transporter permease compare
SGL_RS03790 -3.0 -2.0 GTPase ObgE compare
SGL_RS05560 -3.0 -2.9 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS11000 -3.0 -4.4 sulfate adenylyltransferase compare
SGL_RS12870 -2.9 -4.4 YqeG family HAD IIIA-type phosphatase compare
SGL_RS14905 -2.8 -4.6 30S ribosomal protein PSRP-3 compare
SGL_RS13495 -2.8 -9.4 AarF/ABC1/UbiB kinase family protein compare
SGL_RS13055 -2.8 -1.9 protein translocase subunit SecF compare
SGL_RS08275 -2.8 -3.2 tetratricopeptide repeat protein compare
SGL_RS03250 -2.7 -4.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD compare
SGL_RS07840 -2.7 -1.8 SDR family NAD(P)-dependent oxidoreductase compare
SGL_RS03520 -2.7 -3.2 ABC transporter permease compare
SGL_RS06675 -2.7 -5.0 ABC transporter ATP-binding protein compare
SGL_RS12335 -2.7 -5.3 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS05440 -2.6 -1.8 ACP S-malonyltransferase compare
SGL_RS07305 -2.6 -7.1 N-acetylmuramic acid 6-phosphate etherase compare
SGL_RS17405 -2.6 -6.3 L-2-hydroxyglutarate oxidase compare
SGL_RS14620 -2.6 -9.7 CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein compare
SGL_RS16770 -2.6 -5.8 LptF/LptG family permease compare
SGL_RS05435 -2.6 -1.8 heavy metal translocating P-type ATPase compare
SGL_RS12585 -2.6 -2.5 ABC transporter permease subunit compare
SGL_RS06730 -2.6 -13.5 succinate dehydrogenase/fumarate reductase flavoprotein subunit compare
SGL_RS08765 -2.5 -2.4 2-phosphosulfolactate phosphatase family protein compare
SGL_RS12690 -2.5 -4.8 hypothetical protein compare
SGL_RS16940 -2.5 -2.6 dephospho-CoA kinase compare
SGL_RS04810 -2.5 -2.4 AarF/ABC1/UbiB kinase family protein compare
SGL_RS17470 -2.5 -2.4 nickel pincer cofactor biosynthesis protein LarB compare
SGL_RS04230 -2.5 -3.3 exonuclease subunit SbcC compare
SGL_RS17125 -2.5 -4.6 inositol monophosphatase family protein compare
SGL_RS11775 -2.4 -7.1 isoaspartyl peptidase/L-asparaginase compare
SGL_RS17740 -2.4 -9.7 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
SGL_RS16360 -2.4 -2.8 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
SGL_RS03425 -2.4 -2.3 precorrin-3B C(17)-methyltransferase compare
SGL_RS15560 -2.4 -2.3 dethiobiotin synthase compare
SGL_RS02580 -2.4 -2.8 DUF1818 family protein compare
SGL_RS06370 -2.4 -5.9 cysteine synthase A compare
SGL_RS14045 -2.4 -3.7 hypothetical protein compare
SGL_RS12685 -2.4 -3.1 hypothetical protein compare
SGL_RS11835 -2.4 -2.2 transcription antitermination factor NusB compare
SGL_RS01905 -2.3 -10.2 GDP-mannose 4,6-dehydratase compare
SGL_RS06110 -2.3 -3.1 glycosyltransferase family 4 protein compare
SGL_RS16100 -2.3 -7.9 heavy metal translocating P-type ATPase compare
SGL_RS17305 -2.3 -2.7 pyrroline-5-carboxylate reductase compare
SGL_RS07170 -2.3 -2.1 glycine cleavage system protein GcvH compare
SGL_RS18300 -2.3 -2.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SGL_RS11510 -2.3 -2.9 dihydroneopterin aldolase compare
SGL_RS08045 -2.3 -11.5 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
SGL_RS12755 -2.3 -11.8 IMS domain-containing protein compare
SGL_RS17650 -2.2 -2.5 hypothetical protein compare
SGL_RS13685 -2.2 -8.8 ABC transporter ATP-binding protein compare
SGL_RS08175 -2.2 -2.5 serine hydrolase compare
SGL_RS04720 -2.2 -1.5 iron uptake porin compare
SGL_RS08710 -2.2 -2.1 folylpolyglutamate synthase/dihydrofolate synthase family protein compare
SGL_RS18120 -2.1 -13.3 5'/3'-nucleotidase SurE compare
SGL_RS12985 -2.1 -2.3 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase compare
SGL_RS04735 -2.1 -2.7 hypothetical protein compare
SGL_RS03625 -2.0 -8.9 glycosyltransferase family 1 protein compare
SGL_RS18180 -2.0 -4.6 ABC transporter permease compare
SGL_RS03060 -1.9 -4.3 phosphoadenosine phosphosulfate reductase compare
SGL_RS03380 -1.9 -5.4 sulfite reductase, ferredoxin dependent compare
SGL_RS12575 -1.9 -2.2 riboflavin synthase compare
SGL_RS02305 -1.9 -8.6 NAD-dependent malic enzyme compare
SGL_RS03505 -1.9 -9.1 exopolysaccharide transport family protein compare
SGL_RS17270 -1.9 -2.8 hypothetical protein compare
SGL_RS03970 -1.8 -2.1 thiamine phosphate synthase compare
SGL_RS17230 -1.8 -5.7 L-aspartate oxidase compare
SGL_RS15130 -1.8 -9.5 dTDP-glucose 4,6-dehydratase compare
SGL_RS14105 -1.8 -2.6 2-succinylbenzoate--CoA ligase compare
SGL_RS12400 -1.8 -2.3 lysophospholipid acyltransferase family protein compare
SGL_RS01900 -1.8 -4.6 GDP-L-fucose synthase compare
SGL_RS09150 -1.8 -6.5 acetolactate synthase large subunit compare
SGL_RS13770 -1.8 -1.8 DUF3082 domain-containing protein compare
SGL_RS05210 -1.8 -5.2 SLBB domain-containing protein compare
SGL_RS13870 -1.8 -2.8 rRNA maturation RNase YbeY compare
SGL_RS19585 -1.8 -3.0 hypothetical protein compare
SGL_RS13510 -1.7 -6.1 transglycosylase domain-containing protein compare
SGL_RS15620 -1.7 -2.0 cobyric acid synthase CobQ compare
SGL_RS08650 -1.7 -6.8 S-layer homology domain-containing protein compare
SGL_RS02375 -1.7 -6.9 DUF3086 domain-containing protein compare
SGL_RS14445 -1.7 -2.5 hypothetical protein compare
SGL_RS11655 -1.7 -2.7 iron export ABC transporter permease subunit FetB compare
SGL_RS03950 -1.7 -6.9 homocysteine biosynthesis protein compare
SGL_RS02220 -1.7 -2.4 phosphoribosylformylglycinamidine synthase subunit PurL compare
SGL_RS14585 -1.7 -2.6 TolB family protein compare
SGL_RS05470 -1.7 -1.6 dihydropteroate synthase compare
SGL_RS08535 -1.7 -2.4 NIL domain-containing protein compare
SGL_RS10155 -1.6 -2.8 hypothetical protein compare
SGL_RS09395 -1.6 -1.8 aldo/keto reductase compare
SGL_RS10480 -1.6 -6.6 metallophosphoesterase family protein compare
SGL_RS15785 -1.6 -8.1 ParA family protein compare
SGL_RS03420 -1.6 -5.3 UbiD family decarboxylase compare
SGL_RS07650 -1.6 -8.5 aminoglycoside phosphotransferase family protein compare
SGL_RS14575 -1.6 -1.7 RNA-binding protein compare
SGL_RS10065 -1.6 -10.1 four-carbon acid sugar kinase family protein compare
SGL_RS17340 -1.6 -2.0 quinolinate synthase NadA compare
SGL_RS13370 -1.6 -2.3 exonuclease SbcCD subunit D compare
SGL_RS15865 -1.6 -3.1 septum site-determining protein MinD compare
SGL_RS08115 -1.6 -3.8 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS11885 -1.5 -7.3 fatty acid desaturase compare
SGL_RS03185 -1.5 -2.0 biotin--[acetyl-CoA-carboxylase] ligase compare
SGL_RS19475 -1.5 -3.4 hypothetical protein compare
SGL_RS08790 -1.5 -2.2 carbohydrate ABC transporter permease compare
SGL_RS13560 -1.5 -10.1 glucose-1-phosphate thymidylyltransferase compare
SGL_RS08520 -1.5 -3.0 metalloregulator ArsR/SmtB family transcription factor compare
SGL_RS15370 -1.5 -5.9 DnaJ C-terminal domain-containing protein compare
SGL_RS12235 -1.4 -1.6 aminopeptidase P N-terminal domain-containing protein compare
SGL_RS11675 -1.4 -3.6 chromophore lyase CpcT/CpeT compare
SGL_RS05330 -1.4 -10.1 ABC transporter ATP-binding protein compare
SGL_RS06640 -1.4 -1.8 DUF4168 domain-containing protein compare
SGL_RS13805 -1.4 -4.7 saccharopine dehydrogenase family protein compare
SGL_RS02795 -1.4 -5.2 flavin prenyltransferase UbiX compare
SGL_RS03675 -1.4 -2.2 hypothetical protein compare
SGL_RS09660 -1.4 -8.0 RelA/SpoT family protein compare
SGL_RS09890 -1.4 -2.3 DUF3007 family protein compare
SGL_RS14435 -1.4 -1.5 cobalt transporter CbiM compare
SGL_RS02095 -1.4 -4.5 dTDP-4-dehydrorhamnose reductase compare
SGL_RS09640 -1.4 -8.1 peptide chain release factor N(5)-glutamine methyltransferase compare
SGL_RS10420 -1.4 -2.9 methionine ABC transporter ATP-binding protein compare
SGL_RS04025 -1.3 -5.3 proton extrusion protein PcxA compare
SGL_RS03570 -1.3 -1.7 Uma2 family endonuclease compare
SGL_RS12920 -1.3 -1.9 hypothetical protein compare
SGL_RS09720 -1.3 -1.9 beta-ketoacyl-ACP synthase compare
SGL_RS11495 -1.3 -1.7 Ig-like domain-containing protein compare
SGL_RS07945 -1.3 -2.0 type IV pilin-like G/H family protein compare
SGL_RS03460 -1.3 -7.3 hypothetical protein compare
SGL_RS15870 -1.3 -4.6 septum site-determining protein MinC compare
SGL_RS07935 -1.3 -1.5 hypothetical protein compare
SGL_RS13900 -1.3 -7.3 AI-2E family transporter compare
SGL_RS02845 -1.3 -2.0 thylakoid membrane protein compare
SGL_RS04650 -1.3 -8.9 tetratricopeptide repeat protein compare
SGL_RS03275 -1.3 -6.8 UDP-glucose/GDP-mannose dehydrogenase family protein compare
SGL_RS10245 -1.3 -5.3 glycoside hydrolase family protein compare
SGL_RS03430 -1.3 -4.3 DUF4335 domain-containing protein compare
SGL_RS12340 -1.3 -7.1 hypothetical protein compare
SGL_RS15845 -1.2 -6.4 polyphosphate kinase 1 compare
SGL_RS18115 -1.2 -1.7 DUF3727 domain-containing protein compare
SGL_RS15790 -1.2 -5.5 hypothetical protein compare
SGL_RS00410 -1.2 -2.9 SDR family oxidoreductase compare
SGL_RS03550 -1.2 -7.8 CDP-glucose 4,6-dehydratase compare
SGL_RS05480 -1.2 -3.4 FAD-dependent oxidoreductase compare
SGL_RS13855 -1.2 -2.8 hypothetical protein compare
SGL_RS09385 -1.2 -1.3 2-carboxy-1,4-naphthoquinone phytyltransferase compare
SGL_RS06800 -1.2 -8.0 glutathione synthase compare
SGL_RS06780 -1.2 -4.4 hypothetical protein compare
SGL_RS04490 -1.2 -2.1 2TM domain-containing protein compare
SGL_RS14860 -1.2 -1.5 8-amino-7-oxononanoate synthase compare
SGL_RS12820 -1.2 -5.8 1,4-alpha-glucan branching enzyme compare
SGL_RS12660 -1.2 -6.6 DNA double-strand break repair nuclease NurA compare
SGL_RS18930 -1.2 -1.6 PIN domain-containing protein compare


Specific Phenotypes

For 3 genes in this experiment

For nitrogen source L-Arginine in Synechocystis sp000284455 PCC 6803

For nitrogen source L-Arginine across organisms