Experiment set1S140 for Synechocystis sp000284455 PCC 6803

Compare to:

NaNO3 10 mM as N source, buffered with 20 mM TES pH8

200 most important genes:

  gene name fitness t score description  
SGL_RS03840 -4.5 -3.1 adenylyl-sulfate kinase compare
SGL_RS07200 -4.3 -5.0 LCP family protein compare
SGL_RS06675 -4.0 -5.4 ABC transporter ATP-binding protein compare
SGL_RS03365 -3.9 -4.5 Ycf66 family protein compare
SGL_RS11000 -3.5 -3.4 sulfate adenylyltransferase compare
SGL_RS14430 -3.5 -3.4 cobalt ECF transporter T component CbiQ compare
SGL_RS02260 -3.5 -3.3 HEAT repeat domain-containing protein compare
SGL_RS12770 -3.4 -3.3 uroporphyrinogen-III C-methyltransferase compare
SGL_RS17650 -3.4 -2.3 hypothetical protein compare
SGL_RS05880 -3.4 -4.5 sugar ABC transporter substrate-binding protein compare
SGL_RS06020 -3.3 -5.4 sugar ABC transporter permease compare
SGL_RS08790 -3.3 -3.2 carbohydrate ABC transporter permease compare
SGL_RS06430 -3.3 -3.1 glycosyltransferase family 2 protein compare
SGL_RS05560 -3.3 -2.3 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS16100 -3.2 -8.2 heavy metal translocating P-type ATPase compare
SGL_RS13535 -3.1 -3.0 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
SGL_RS13870 -3.0 -3.5 rRNA maturation RNase YbeY compare
SGL_RS07605 -3.0 -2.8 HEAT repeat domain-containing protein compare
SGL_RS17520 -3.0 -3.5 DUF3352 domain-containing protein compare
SGL_RS03520 -3.0 -3.4 ABC transporter permease compare
SGL_RS03540 -2.9 -7.0 ABC transporter ATP-binding protein compare
SGL_RS12490 -2.8 -4.2 glutamate--cysteine ligase compare
SGL_RS16880 -2.7 -3.2 3'(2'),5'-bisphosphate nucleotidase CysQ compare
SGL_RS14425 -2.7 -3.1 energy-coupling factor ABC transporter ATP-binding protein compare
SGL_RS03060 -2.7 -5.0 phosphoadenosine phosphosulfate reductase compare
SGL_RS08275 -2.6 -3.0 tetratricopeptide repeat protein compare
SGL_RS04525 -2.6 -3.0 photosynthesis system II assembly factor Ycf48 compare
SGL_RS03425 -2.6 -2.4 precorrin-3B C(17)-methyltransferase compare
SGL_RS14105 -2.5 -2.9 2-succinylbenzoate--CoA ligase compare
SGL_RS15530 -2.5 -2.4 phosphoribosylformylglycinamidine synthase subunit PurQ compare
SGL_RS03790 -2.5 -2.9 GTPase ObgE compare
SGL_RS06585 -2.5 -2.9 nitrate ABC transporter ATP-binding protein compare
SGL_RS14575 -2.4 -2.0 RNA-binding protein compare
SGL_RS15560 -2.4 -2.3 dethiobiotin synthase compare
SGL_RS13055 -2.4 -2.2 protein translocase subunit SecF compare
SGL_RS02665 -2.4 -1.8 nickel pincer cofactor biosynthesis protein LarC compare
SGL_RS15425 -2.4 -4.9 cobalamin biosynthesis protein CobW compare
SGL_RS09385 -2.3 -1.6 2-carboxy-1,4-naphthoquinone phytyltransferase compare
SGL_RS17305 -2.3 -2.7 pyrroline-5-carboxylate reductase compare
SGL_RS12575 -2.3 -2.2 riboflavin synthase compare
SGL_RS03950 -2.3 -8.0 homocysteine biosynthesis protein compare
SGL_RS08605 -2.3 -4.5 DUF3120 domain-containing protein compare
SGL_RS12335 -2.3 -5.3 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS03970 -2.3 -2.1 thiamine phosphate synthase compare
SGL_RS08175 -2.3 -2.6 serine hydrolase compare
SGL_RS05380 -2.3 -3.2 monovalent cation/H(+) antiporter subunit G compare
SGL_RS15620 -2.3 -2.1 cobyric acid synthase CobQ compare
SGL_RS15045 -2.2 -6.3 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS16360 -2.2 -2.9 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
SGL_RS12870 -2.1 -3.2 YqeG family HAD IIIA-type phosphatase compare
SGL_RS02220 -2.1 -2.8 phosphoribosylformylglycinamidine synthase subunit PurL compare
SGL_RS12400 -2.1 -2.4 lysophospholipid acyltransferase family protein compare
SGL_RS12585 -2.1 -3.1 ABC transporter permease subunit compare
SGL_RS13770 -2.1 -2.0 DUF3082 domain-containing protein compare
SGL_RS04155 -2.1 -3.1 reverse transcriptase domain-containing protein compare
SGL_RS05435 -2.1 -2.4 heavy metal translocating P-type ATPase compare
SGL_RS03625 -2.1 -7.2 glycosyltransferase family 1 protein compare
SGL_RS14445 -2.1 -2.7 hypothetical protein compare
SGL_RS07840 -2.0 -2.3 SDR family NAD(P)-dependent oxidoreductase compare
SGL_RS15435 -2.0 -6.3 PD40 domain-containing protein compare
SGL_RS10305 -2.0 -4.2 PIN/TRAM domain-containing protein compare
SGL_RS14585 -2.0 -2.7 TolB family protein compare
SGL_RS05440 -2.0 -2.2 ACP S-malonyltransferase compare
SGL_RS18180 -1.9 -3.2 ABC transporter permease compare
SGL_RS14335 -1.9 -2.1 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase compare
SGL_RS09720 -1.9 -2.2 beta-ketoacyl-ACP synthase compare
SGL_RS06590 -1.9 -3.8 nitrate ABC transporter permease compare
SGL_RS16940 -1.9 -2.7 dephospho-CoA kinase compare
SGL_RS16950 -1.8 -7.5 phosphoketolase compare
SGL_RS01905 -1.8 -7.7 GDP-mannose 4,6-dehydratase compare
SGL_RS07935 -1.8 -3.4 hypothetical protein compare
SGL_RS03775 -1.8 -4.1 membrane protein compare
SGL_RS17330 -1.8 -6.9 biosynthetic arginine decarboxylase compare
SGL_RS18215 -1.8 -5.2 pentapeptide repeat-containing protein compare
SGL_RS13685 -1.7 -8.2 ABC transporter ATP-binding protein compare
SGL_RS03185 -1.7 -2.0 biotin--[acetyl-CoA-carboxylase] ligase compare
SGL_RS11135 -1.7 -2.1 D-alanyl-D-alanine dipeptidase DdpX compare
SGL_RS14435 -1.7 -1.8 cobalt transporter CbiM compare
SGL_RS13370 -1.7 -2.5 exonuclease SbcCD subunit D compare
SGL_RS08710 -1.7 -2.6 folylpolyglutamate synthase/dihydrofolate synthase family protein compare
SGL_RS08535 -1.6 -2.8 NIL domain-containing protein compare
SGL_RS05980 -1.6 -3.4 hypothetical protein compare
SGL_RS11240 -1.6 -1.8 photosystem I reaction center subunit IV compare
SGL_RS04720 -1.6 -1.5 iron uptake porin compare
SGL_RS11510 -1.6 -2.9 dihydroneopterin aldolase compare
SGL_RS16735 -1.6 -2.0 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
SGL_RS05235 -1.6 -3.2 phycobilisome linker polypeptide compare
SGL_RS03550 -1.5 -8.4 CDP-glucose 4,6-dehydratase compare
SGL_RS18300 -1.5 -2.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SGL_RS12920 -1.5 -1.7 hypothetical protein compare
SGL_RS05385 -1.5 -6.0 DUF4040 domain-containing protein compare
SGL_RS04390 -1.5 -2.2 DUF433 domain-containing protein compare
SGL_RS05375 -1.4 -1.9 hypothetical protein compare
SGL_RS08155 -1.4 -1.7 Spy/CpxP family protein refolding chaperone compare
SGL_RS00830 -1.4 -3.9 hypothetical protein compare
SGL_RS19475 -1.4 -2.4 hypothetical protein compare
SGL_RS01205 -1.4 -4.9 ParB/RepB/Spo0J family partition protein compare
SGL_RS06130 -1.4 -2.5 anti-sigma regulatory factor compare
SGL_RS14045 -1.4 -3.2 hypothetical protein compare
SGL_RS13855 -1.4 -3.0 hypothetical protein compare
SGL_RS06440 -1.4 -2.3 NAD-dependent epimerase/dehydratase family protein compare
SGL_RS03380 -1.3 -4.5 sulfite reductase, ferredoxin dependent compare
SGL_RS11025 -1.3 -4.1 oxidoreductase compare
SGL_RS05465 -1.3 -2.0 hypothetical protein compare
SGL_RS07870 -1.3 -1.9 Ycf51 family protein compare
SGL_RS06340 -1.3 -6.7 response regulator transcription factor compare
SGL_RS06755 -1.3 -4.6 bacterioferritin-associated ferredoxin compare
SGL_RS15865 -1.3 -3.0 septum site-determining protein MinD compare
SGL_RS04490 -1.3 -2.2 2TM domain-containing protein compare
SGL_RS12925 -1.2 -3.9 AAA family ATPase compare
SGL_RS01900 -1.2 -4.3 GDP-L-fucose synthase compare
SGL_RS15130 -1.2 -4.7 dTDP-glucose 4,6-dehydratase compare
SGL_RS14300 -1.2 -8.9 HAMP domain-containing sensor histidine kinase compare
SGL_RS14245 -1.2 -5.0 TMEM165/GDT1 family protein compare
SGL_RS09820 -1.2 -2.4 ribosome maturation factor RimM compare
SGL_RS06600 -1.2 -5.8 anthranilate phosphoribosyltransferase family protein compare
SGL_RS12030 -1.2 -2.9 extracellular solute-binding protein compare
SGL_RS03085 -1.2 -3.2 DUF2862 domain-containing protein compare
SGL_RS10320 -1.2 -1.7 ribosome biogenesis GTPase Der compare
SGL_RS06595 -1.2 -2.7 CmpA/NrtA family ABC transporter substrate-binding protein compare
SGL_RS11305 -1.2 -2.6 carboxylating nicotinate-nucleotide diphosphorylase compare
SGL_RS12545 -1.2 -1.6 GTPase Era compare
SGL_RS11495 -1.1 -2.5 Ig-like domain-containing protein compare
SGL_RS10775 -1.1 -4.1 DUF3326 domain-containing protein compare
SGL_RS17175 -1.1 -2.8 allophycocyanin subunit beta compare
SGL_RS11675 -1.1 -3.1 chromophore lyase CpcT/CpeT compare
SGL_RS15370 -1.1 -3.0 DnaJ C-terminal domain-containing protein compare
SGL_RS14505 -1.1 -3.3 glutamate-5-semialdehyde dehydrogenase compare
SGL_RS19440 -1.1 -1.8 hypothetical protein compare
SGL_RS13805 -1.1 -3.3 saccharopine dehydrogenase family protein compare
SGL_RS11945 -1.1 -5.6 sirohydrochlorin chelatase compare
SGL_RS12820 -1.1 -6.3 1,4-alpha-glucan branching enzyme compare
SGL_RS03250 -1.1 -2.4 tRNA (guanosine(37)-N1)-methyltransferase TrmD compare
SGL_RS05390 -1.1 -2.2 Na(+)/H(+) antiporter subunit B compare
SGL_RS02515 -1.0 -3.3 M56 family metallopeptidase compare
SGL_RS19585 -1.0 -2.3 hypothetical protein compare
SGL_RS04660 -1.0 -2.2 phycobilisome rod-core linker polypeptide compare
SGL_RS08115 -1.0 -3.0 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS00825 -1.0 -4.1 hypothetical protein compare
SGL_RS12930 -1.0 -1.4 DUF1257 domain-containing protein compare
SGL_RS02095 -1.0 -3.8 dTDP-4-dehydrorhamnose reductase compare
SGL_RS13910 -1.0 -1.8 phasin family protein compare
SGL_RS04335 -1.0 -3.2 GNAT family N-acetyltransferase compare
SGL_RS06355 -1.0 -1.5 carbon dioxide-concentrating mechanism protein CcmK compare
SGL_RS14285 -1.0 -1.9 hypothetical protein compare
SGL_RS10130 -1.0 -7.3 fatty acid desaturase compare
SGL_RS11445 -1.0 -1.8 DUF1816 domain-containing protein compare
SGL_RS19605 -1.0 -2.1 hypothetical protein compare
SGL_RS03870 -1.0 -6.0 histidinol dehydrogenase compare
SGL_RS17125 -1.0 -2.4 inositol monophosphatase family protein compare
SGL_RS13900 -1.0 -6.3 AI-2E family transporter compare
SGL_RS03265 -1.0 -1.2 photosystem II complex extrinsic protein PsbU compare
SGL_RS13905 -1.0 -3.3 hypothetical protein compare
SGL_RS14780 -1.0 -4.3 cyanase compare
SGL_RS07930 -0.9 -5.6 hypothetical protein compare
SGL_RS02460 -0.9 -1.7 phosphate signaling complex protein PhoU compare
SGL_RS15305 -0.9 -2.6 ribonuclease HI compare
SGL_RS08765 -0.9 -1.2 2-phosphosulfolactate phosphatase family protein compare
SGL_RS10155 -0.9 -2.1 hypothetical protein compare
SGL_RS15870 -0.9 -3.6 septum site-determining protein MinC compare
SGL_RS07180 -0.9 -2.2 carboxynorspermidine decarboxylase compare
SGL_RS15875 -0.9 -5.3 FHA domain-containing protein compare
SGL_RS05370 -0.9 -1.5 Na+/H+ antiporter subunit E compare
SGL_RS05005 -0.9 -3.4 Uma2 family endonuclease compare
SGL_RS09845 -0.9 -2.4 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
SGL_RS00015 -0.9 -1.3 DUF5615 family PIN-like protein compare
SGL_RS03585 -0.9 -3.9 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS02580 -0.9 -1.3 DUF1818 family protein compare
SGL_RS14860 -0.9 -1.3 8-amino-7-oxononanoate synthase compare
SGL_RS20080 -0.8 -1.4 DUF4335 domain-containing protein compare
SGL_RS14540 -0.8 -1.0 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR compare
SGL_RS15785 -0.8 -4.3 ParA family protein compare
SGL_RS12210 -0.8 -5.5 type IV pilus twitching motility protein PilT compare
SGL_RS02475 -0.8 -1.5 YlxR family protein compare
SGL_RS09890 -0.8 -2.9 DUF3007 family protein compare
SGL_RS08495 -0.8 -4.4 DUF3370 domain-containing protein compare
SGL_RS15490 -0.8 -2.4 MotA/TolQ/ExbB proton channel family protein compare
SGL_RS08880 -0.8 -5.0 K(+)-transporting ATPase subunit C compare
SGL_RS06780 -0.8 -3.3 hypothetical protein compare
SGL_RS00110 -0.8 -1.7 AAA family ATPase compare
SGL_RS05470 -0.8 -1.2 dihydropteroate synthase compare
SGL_RS10960 -0.8 -1.2 RpiB/LacA/LacB family sugar-phosphate isomerase compare
SGL_RS17495 -0.8 -3.0 peptidoglycan editing factor PgeF compare
SGL_RS04230 -0.8 -1.6 exonuclease subunit SbcC compare
SGL_RS02785 -0.8 -3.7 CRR6 family NdhI maturation factor compare
SGL_RS13170 -0.8 -2.5 histidine kinase compare
SGL_RS02330 -0.7 -2.2 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA compare
SGL_RS07105 -0.7 -2.6 precorrin-6Y C5,15-methyltransferase subunit CbiT compare
SGL_RS02850 -0.7 -2.3 uracil phosphoribosyltransferase compare
SGL_RS05355 -0.7 -5.8 cation:proton antiporter compare
SGL_RS04960 -0.7 -1.9 VOC family protein compare
SGL_RS12755 -0.7 -4.5 IMS domain-containing protein compare
SGL_RS06640 -0.7 -1.2 DUF4168 domain-containing protein compare
SGL_RS18365 -0.7 -4.1 glycosyltransferase family 9 protein compare
SGL_RS03590 -0.7 -3.1 ATP-grasp domain-containing protein compare
SGL_RS04510 -0.7 -3.0 DUF561 domain-containing protein compare
SGL_RS04710 -0.7 -1.3 GNAT family N-acetyltransferase compare
SGL_RS02825 -0.7 -4.0 translational GTPase TypA compare
SGL_RS16915 -0.7 -2.0 trigger factor compare
SGL_RS11325 -0.7 -2.9 pitrilysin family protein compare


Specific Phenotypes

None in this experiment

For Synechocystis sp000284455 PCC 6803 in nitrogen source experiments

For nitrogen source Sodium nitrate across organisms