Experiment set1S138 for Synechocystis sp000284455 PCC 6803

Compare to:

growth in full media

200 most important genes:

  gene name fitness t score description  
SGL_RS05375 -6.1 -4.2 hypothetical protein compare
SGL_RS04510 -6.0 -7.1 DUF561 domain-containing protein compare
SGL_RS03365 -6.0 -4.1 Ycf66 family protein compare
SGL_RS02515 -5.9 -5.8 M56 family metallopeptidase compare
SGL_RS02460 -5.9 -4.1 phosphate signaling complex protein PhoU compare
SGL_RS03545 -5.8 -5.6 glucose-1-phosphate cytidylyltransferase compare
SGL_RS13910 -5.8 -5.4 phasin family protein compare
SGL_RS06675 -5.8 -4.0 ABC transporter ATP-binding protein compare
SGL_RS02955 -5.7 -5.4 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS12870 -5.5 -3.8 YqeG family HAD IIIA-type phosphatase compare
SGL_RS05370 -5.5 -2.6 Na+/H+ antiporter subunit E compare
SGL_RS03540 -5.4 -6.4 ABC transporter ATP-binding protein compare
SGL_RS03550 -5.4 -13.4 CDP-glucose 4,6-dehydratase compare
SGL_RS05880 -5.4 -3.7 sugar ABC transporter substrate-binding protein compare
SGL_RS07200 -5.4 -3.7 LCP family protein compare
SGL_RS15655 -5.3 -12.8 asparaginase compare
SGL_RS08495 -5.3 -9.6 DUF3370 domain-containing protein compare
SGL_RS04775 -5.3 -6.2 alpha/beta hydrolase compare
SGL_RS02145 -5.2 -8.7 metallophosphoesterase compare
SGL_RS03060 -5.2 -5.0 phosphoadenosine phosphosulfate reductase compare
SGL_RS10775 -5.2 -6.8 DUF3326 domain-containing protein compare
SGL_RS16545 -5.1 -10.4 LdpA C-terminal domain-containing domain compare
SGL_RS15700 -5.1 -10.3 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
SGL_RS06020 -5.1 -3.5 sugar ABC transporter permease compare
SGL_RS15425 -5.1 -6.0 cobalamin biosynthesis protein CobW compare
SGL_RS13555 -5.0 -5.9 aldehyde oxygenase (deformylating) compare
SGL_RS09295 -4.9 -17.5 alpha/beta hydrolase compare
SGL_RS14905 -4.9 -4.7 30S ribosomal protein PSRP-3 compare
SGL_RS05385 -4.8 -7.3 DUF4040 domain-containing protein compare
SGL_RS05380 -4.8 -3.3 monovalent cation/H(+) antiporter subunit G compare
SGL_RS03625 -4.8 -10.1 glycosyltransferase family 1 protein compare
SGL_RS03840 -4.7 -3.2 adenylyl-sulfate kinase compare
SGL_RS02260 -4.7 -3.2 HEAT repeat domain-containing protein compare
SGL_RS03520 -4.7 -3.2 ABC transporter permease compare
SGL_RS06440 -4.7 -5.5 NAD-dependent epimerase/dehydratase family protein compare
SGL_RS10160 -4.6 -6.2 B12-binding domain-containing radical SAM protein compare
SGL_RS03560 -4.5 -8.6 class I SAM-dependent methyltransferase compare
SGL_RS17405 -4.5 -6.8 L-2-hydroxyglutarate oxidase compare
SGL_RS12490 -4.5 -3.1 glutamate--cysteine ligase compare
SGL_RS08790 -4.4 -3.0 carbohydrate ABC transporter permease compare
SGL_RS02580 -4.4 -3.0 DUF1818 family protein compare
SGL_RS06130 -4.4 -3.0 anti-sigma regulatory factor compare
SGL_RS12770 -4.4 -3.0 uroporphyrinogen-III C-methyltransferase compare
SGL_RS06430 -4.4 -3.0 glycosyltransferase family 2 protein compare
SGL_RS03585 -4.3 -8.1 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS03555 -4.3 -10.0 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS16860 -4.3 -8.6 small ribosomal subunit biogenesis GTPase RsgA compare
SGL_RS14540 -4.2 -2.9 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR compare
SGL_RS13535 -4.2 -2.9 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
SGL_RS13495 -4.2 -11.6 AarF/ABC1/UbiB kinase family protein compare
SGL_RS12755 -4.2 -13.1 IMS domain-containing protein compare
SGL_RS16100 -4.1 -6.9 heavy metal translocating P-type ATPase compare
SGL_RS15045 -4.1 -6.3 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS11510 -4.1 -3.9 dihydroneopterin aldolase compare
SGL_RS05390 -4.1 -6.2 Na(+)/H(+) antiporter subunit B compare
SGL_RS14430 -4.1 -2.8 cobalt ECF transporter T component CbiQ compare
SGL_RS14425 -4.1 -2.8 energy-coupling factor ABC transporter ATP-binding protein compare
SGL_RS11000 -4.1 -2.8 sulfate adenylyltransferase compare
SGL_RS18320 -4.0 -11.4 serine/threonine-protein kinase compare
SGL_RS03590 -4.0 -7.4 ATP-grasp domain-containing protein compare
SGL_RS14195 -3.9 -6.7 phosphate ABC transporter permease subunit PstC compare
SGL_RS10130 -3.9 -14.0 fatty acid desaturase compare
SGL_RS16880 -3.9 -3.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
SGL_RS05320 -3.9 -14.5 PBP1A family penicillin-binding protein compare
SGL_RS14930 -3.8 -8.8 type I methionyl aminopeptidase compare
SGL_RS12920 -3.8 -2.6 hypothetical protein compare
SGL_RS14185 -3.8 -6.0 phosphate ABC transporter ATP-binding protein PstB compare
SGL_RS09820 -3.7 -3.0 ribosome maturation factor RimM compare
SGL_RS03775 -3.7 -5.6 membrane protein compare
SGL_RS17685 -3.7 -9.7 ArsB/NhaD family transporter compare
SGL_RS19585 -3.7 -3.9 hypothetical protein compare
SGL_RS05980 -3.7 -3.5 hypothetical protein compare
SGL_RS16940 -3.7 -3.5 dephospho-CoA kinase compare
SGL_RS17650 -3.6 -2.5 hypothetical protein compare
SGL_RS14920 -3.6 -3.5 cation:proton antiporter compare
SGL_RS14025 -3.6 -10.6 gamma-glutamyl-phosphate reductase compare
SGL_RS14015 -3.6 -13.3 AI-2E family transporter compare
SGL_RS17125 -3.6 -5.4 inositol monophosphatase family protein compare
SGL_RS13870 -3.6 -3.5 rRNA maturation RNase YbeY compare
SGL_RS16670 -3.5 -16.7 DUF5942 domain-containing protein compare
SGL_RS09845 -3.5 -4.7 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
SGL_RS14190 -3.5 -7.1 phosphate ABC transporter permease PstA compare
SGL_RS11760 -3.5 -9.9 radical SAM protein compare
SGL_RS04490 -3.4 -2.4 2TM domain-containing protein compare
SGL_RS12545 -3.4 -2.3 GTPase Era compare
SGL_RS10320 -3.4 -2.3 ribosome biogenesis GTPase Der compare
SGL_RS13195 -3.4 -5.1 Ig-like domain-containing protein compare
SGL_RS14180 -3.4 -13.7 phosphate ABC transporter ATP-binding protein PstB compare
SGL_RS11025 -3.4 -7.3 oxidoreductase compare
SGL_RS14445 -3.4 -2.3 hypothetical protein compare
SGL_RS13510 -3.3 -7.9 transglycosylase domain-containing protein compare
SGL_RS17305 -3.3 -2.3 pyrroline-5-carboxylate reductase compare
SGL_RS17330 -3.3 -9.1 biosynthetic arginine decarboxylase compare
SGL_RS05560 -3.3 -3.1 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS07650 -3.3 -12.4 aminoglycoside phosphotransferase family protein compare
SGL_RS10585 -3.3 -15.7 MFS transporter compare
SGL_RS14435 -3.2 -2.1 cobalt transporter CbiM compare
SGL_RS10305 -3.2 -6.3 PIN/TRAM domain-containing protein compare
SGL_RS13465 -3.2 -11.1 class II fumarate hydratase compare
SGL_RS03505 -3.1 -11.6 exopolysaccharide transport family protein compare
SGL_RS03380 -3.1 -6.8 sulfite reductase, ferredoxin dependent compare
SGL_RS02375 -3.1 -6.8 DUF3086 domain-containing protein compare
SGL_RS04525 -3.1 -2.9 photosynthesis system II assembly factor Ycf48 compare
SGL_RS13055 -3.1 -2.1 protein translocase subunit SecF compare
SGL_RS12745 -3.1 -2.9 glycine cleavage system aminomethyltransferase GcvT compare
SGL_RS09905 -3.0 -3.6 biotin/lipoate A/B protein ligase family protein compare
SGL_RS10480 -3.0 -11.3 metallophosphoesterase family protein compare
SGL_RS07605 -3.0 -3.4 HEAT repeat domain-containing protein compare
SGL_RS18270 -3.0 -5.2 family 10 glycosylhydrolase compare
SGL_RS03450 -3.0 -7.0 permease compare
SGL_RS12235 -3.0 -2.0 aminopeptidase P N-terminal domain-containing protein compare
SGL_RS16915 -3.0 -4.8 trigger factor compare
SGL_RS08710 -2.9 -2.0 folylpolyglutamate synthase/dihydrofolate synthase family protein compare
SGL_RS15560 -2.9 -2.0 dethiobiotin synthase compare
SGL_RS03950 -2.9 -9.3 homocysteine biosynthesis protein compare
SGL_RS04085 -2.9 -3.0 YlqD family protein compare
SGL_RS13855 -2.9 -6.5 hypothetical protein compare
SGL_RS13185 -2.9 -5.9 AI-2E family transporter compare
SGL_RS03970 -2.8 -1.9 thiamine phosphate synthase compare
SGL_RS09160 -2.8 -2.0 thioredoxin family protein compare
SGL_RS12540 -2.8 -8.3 RNA polymerase sigma factor, RpoD/SigA family compare
SGL_RS05435 -2.8 -1.9 heavy metal translocating P-type ATPase compare
SGL_RS14105 -2.8 -3.2 2-succinylbenzoate--CoA ligase compare
SGL_RS13550 -2.8 -2.3 long-chain acyl-[acyl-carrier-protein] reductase compare
SGL_RS17520 -2.8 -3.7 DUF3352 domain-containing protein compare
SGL_RS15620 -2.8 -1.9 cobyric acid synthase CobQ compare
SGL_RS02305 -2.7 -9.4 NAD-dependent malic enzyme compare
SGL_RS05465 -2.7 -4.0 hypothetical protein compare
SGL_RS10245 -2.7 -9.3 glycoside hydrolase family protein compare
SGL_RS06800 -2.7 -12.3 glutathione synthase compare
SGL_RS08275 -2.7 -3.1 tetratricopeptide repeat protein compare
SGL_RS12585 -2.6 -3.1 ABC transporter permease subunit compare
SGL_RS11955 -2.6 -4.3 aminomethyl-transferring glycine dehydrogenase compare
SGL_RS06780 -2.6 -7.3 hypothetical protein compare
SGL_RS15840 -2.6 -10.5 class A beta-lactamase compare
SGL_RS18095 -2.6 -6.9 TIGR03943 family protein compare
SGL_RS08535 -2.6 -3.7 NIL domain-containing protein compare
SGL_RS07305 -2.6 -7.7 N-acetylmuramic acid 6-phosphate etherase compare
SGL_RS12030 -2.6 -4.1 extracellular solute-binding protein compare
SGL_RS15435 -2.6 -8.4 PD40 domain-containing protein compare
SGL_RS03675 -2.6 -3.3 hypothetical protein compare
SGL_RS16770 -2.5 -6.5 LptF/LptG family permease compare
SGL_RS02220 -2.5 -3.3 phosphoribosylformylglycinamidine synthase subunit PurL compare
SGL_RS07565 -2.5 -3.9 hypothetical protein compare
SGL_RS16735 -2.5 -2.4 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
SGL_RS03870 -2.5 -11.2 histidinol dehydrogenase compare
SGL_RS03250 -2.5 -4.3 tRNA (guanosine(37)-N1)-methyltransferase TrmD compare
SGL_RS04230 -2.5 -3.1 exonuclease subunit SbcC compare
SGL_RS11325 -2.4 -4.6 pitrilysin family protein compare
SGL_RS18100 -2.4 -4.6 SH3 domain-containing protein compare
SGL_RS11835 -2.4 -2.3 transcription antitermination factor NusB compare
SGL_RS03275 -2.4 -12.4 UDP-glucose/GDP-mannose dehydrogenase family protein compare
SGL_RS14585 -2.4 -2.7 TolB family protein compare
SGL_RS04720 -2.4 -1.6 iron uptake porin compare
SGL_RS03790 -2.3 -3.1 GTPase ObgE compare
SGL_RS13900 -2.3 -10.1 AI-2E family transporter compare
SGL_RS03425 -2.3 -2.6 precorrin-3B C(17)-methyltransferase compare
SGL_RS12925 -2.3 -5.4 AAA family ATPase compare
SGL_RS03670 -2.3 -5.8 glycosyltransferase compare
SGL_RS11305 -2.3 -4.9 carboxylating nicotinate-nucleotide diphosphorylase compare
SGL_RS07840 -2.3 -2.1 SDR family NAD(P)-dependent oxidoreductase compare
SGL_RS05440 -2.3 -2.5 ACP S-malonyltransferase compare
SGL_RS11135 -2.2 -2.1 D-alanyl-D-alanine dipeptidase DdpX compare
SGL_RS14505 -2.2 -5.7 glutamate-5-semialdehyde dehydrogenase compare
SGL_RS02665 -2.2 -2.0 nickel pincer cofactor biosynthesis protein LarC compare
SGL_RS16690 -2.2 -6.2 adenosine kinase compare
SGL_RS03640 -2.2 -6.3 UDP-glucose 4-epimerase GalE compare
SGL_RS16360 -2.2 -2.9 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
SGL_RS05210 -2.2 -5.8 SLBB domain-containing protein compare
SGL_RS17340 -2.2 -2.4 quinolinate synthase NadA compare
SGL_RS12400 -2.2 -2.5 lysophospholipid acyltransferase family protein compare
SGL_RS09720 -2.2 -2.5 beta-ketoacyl-ACP synthase compare
SGL_RS00830 -2.1 -5.1 hypothetical protein compare
SGL_RS18215 -2.1 -3.4 pentapeptide repeat-containing protein compare
SGL_RS16865 -2.1 -3.7 sulfurtransferase TusA family protein compare
SGL_RS05500 -2.1 -11.5 ribonuclease R compare
SGL_RS18300 -2.1 -3.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SGL_RS12575 -2.1 -2.4 riboflavin synthase compare
SGL_RS09305 -2.1 -4.4 adenosyl-hopene transferase HpnH compare
SGL_RS03005 -2.1 -4.4 nucleoside recognition domain-containing protein compare
SGL_RS05470 -2.1 -1.4 dihydropteroate synthase compare
SGL_RS18170 -2.0 -3.4 PspA/IM30 family protein compare
SGL_RS11675 -2.0 -4.5 chromophore lyase CpcT/CpeT compare
SGL_RS03000 -2.0 -6.2 spore maturation protein compare
SGL_RS08845 -2.0 -5.6 LysR family transcriptional regulator compare
SGL_RS13370 -2.0 -3.0 exonuclease SbcCD subunit D compare
SGL_RS03655 -2.0 -5.3 glycosyltransferase family 2 protein compare
SGL_RS01565 -2.0 -16.9 CusA/CzcA family heavy metal efflux RND transporter compare
SGL_RS15870 -2.0 -6.4 septum site-determining protein MinC compare
SGL_RS15530 -2.0 -2.2 phosphoribosylformylglycinamidine synthase subunit PurQ compare
SGL_RS08175 -2.0 -2.8 serine hydrolase compare
SGL_RS17470 -2.0 -3.1 nickel pincer cofactor biosynthesis protein LarB compare
SGL_RS02280 -2.0 -7.1 Rne/Rng family ribonuclease compare
SGL_RS12910 -1.9 -6.5 acetyl-CoA carboxylase, carboxyltransferase subunit beta compare
SGL_RS12340 -1.9 -10.6 hypothetical protein compare
SGL_RS10790 -1.9 -4.4 DUF4359 domain-containing protein compare
SGL_RS16705 -1.9 -4.9 diadenylate cyclase CdaA compare
SGL_RS16950 -1.9 -6.1 phosphoketolase compare
SGL_RS03430 -1.9 -5.7 DUF4335 domain-containing protein compare
SGL_RS03630 -1.9 -3.7 glycosyltransferase family 2 protein compare


Specific Phenotypes

None in this experiment

For Synechocystis sp000284455 PCC 6803 in nitrogen source experiments