Experiment set1S138 for Synechocystis sp000284455 PCC 6803

Compare to:

growth in full media

200 most detrimental genes:

  gene name fitness t score description  
SGL_RS14640 +1.4 2.6 hypothetical protein compare
SGL_RS03610 +0.8 2.0 hypothetical protein compare
SGL_RS12600 +0.8 2.5 DUF2062 domain-containing protein compare
SGL_RS03705 +0.6 1.8 UDP-glucose 4-epimerase compare
SGL_RS14590 +0.6 2.0 hypothetical protein compare
SGL_RS00560 +0.6 1.3 Rpn family recombination-promoting nuclease/putative transposase compare
SGL_RS08555 +0.6 1.1 DUF2442 domain-containing protein compare
SGL_RS11595 +0.6 2.3 FkbM family methyltransferase compare
SGL_RS03535 +0.6 1.2 Uma2 family endonuclease compare
SGL_RS00595 +0.6 1.2 hypothetical protein compare
SGL_RS03760 +0.6 2.6 hypothetical protein compare
SGL_RS02540 +0.6 2.7 universal stress protein compare
SGL_RS17755 +0.6 3.0 circadian clock protein KaiB compare
SGL_RS18840 +0.6 0.9 hypothetical protein compare
SGL_RS13150 +0.6 1.6 DUF751 family protein compare
SGL_RS20125 +0.6 1.5 hypothetical protein compare
SGL_RS18475 +0.5 1.6 metalloregulator ArsR/SmtB family transcription factor compare
SGL_RS08910 +0.5 1.5 hypothetical protein compare
SGL_RS01855 +0.5 2.0 AIPR family protein compare
SGL_RS19630 +0.5 2.1 DUF4114 domain-containing protein compare
SGL_RS06635 +0.5 1.2 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
SGL_RS07395 +0.5 1.1 cupin domain-containing protein compare
SGL_RS19730 +0.5 1.5 DNA cytosine methyltransferase compare
SGL_RS14535 +0.5 1.4 hypothetical protein compare
SGL_RS00655 +0.5 1.5 YlcI/YnfO family protein compare
SGL_RS10445 +0.5 1.5 L-threonylcarbamoyladenylate synthase compare
SGL_RS01160 +0.5 1.5 DUF5615 family PIN-like protein compare
SGL_RS05415 +0.5 1.8 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
SGL_RS05870 +0.5 1.8 DUF1823 family protein compare
SGL_RS20110 +0.5 1.2 hypothetical protein compare
SGL_RS14005 +0.5 1.5 abortive infection system antitoxin AbiGi family protein compare
SGL_RS10180 +0.5 1.9 GUN4 domain-containing protein compare
SGL_RS08090 +0.5 1.7 photosystem II reaction center protein Psb28 compare
SGL_RS14150 +0.5 0.9 antitoxin compare
SGL_RS19370 +0.5 1.7 hypothetical protein compare
SGL_RS13690 +0.5 1.3 pentapeptide repeat-containing protein compare
SGL_RS01240 +0.5 1.8 cupin domain-containing protein compare
SGL_RS10685 +0.5 2.6 type IV pilus assembly protein PilM compare
SGL_RS05205 +0.4 1.6 DEAD/DEAH box helicase compare
SGL_RS02195 +0.4 1.2 nucleoside monophosphate kinase compare
SGL_RS06035 +0.4 1.4 Rieske (2Fe-2S) protein compare
SGL_RS13210 +0.4 1.3 glycosyltransferase compare
SGL_RS07270 +0.4 0.9 hypothetical protein compare
SGL_RS05220 +0.4 1.7 DUF1995 family protein compare
SGL_RS01035 +0.4 1.7 type III-B CRISPR module RAMP protein Cmr4 compare
SGL_RS17975 +0.4 2.3 hypothetical protein compare
SGL_RS05890 +0.4 1.1 urease accessory protein UreF compare
SGL_RS17860 +0.4 1.9 Holliday junction resolvase RuvX compare
SGL_RS18640 +0.4 1.4 transposase compare
SGL_RS13215 +0.4 1.5 SxtJ family membrane protein compare
SGL_RS16185 +0.4 1.8 D-alanyl-D-alanine carboxypeptidase family protein compare
SGL_RS19555 +0.4 0.9 hypothetical protein compare
SGL_RS10430 +0.4 3.0 S1 RNA-binding domain-containing protein compare
SGL_RS07920 +0.4 0.9 DUF29 domain-containing protein compare
SGL_RS01960 +0.4 1.9 MFS transporter compare
SGL_RS13795 +0.4 0.6 phosphohistidine phosphatase SixA compare
SGL_RS02075 +0.4 2.9 ATP-dependent DNA helicase compare
SGL_RS04890 +0.4 0.9 hypothetical protein compare
SGL_RS09930 +0.4 0.9 glutaredoxin family protein compare
SGL_RS01080 +0.4 1.8 hypothetical protein compare
SGL_RS17070 +0.4 1.0 DUF3146 family protein compare
SGL_RS07780 +0.4 1.3 HNH endonuclease compare
SGL_RS11750 +0.4 0.6 hypothetical protein compare
SGL_RS00435 +0.4 2.0 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS02355 +0.4 0.9 hypothetical protein compare
SGL_RS05035 +0.4 0.6 hypothetical protein compare
SGL_RS17235 +0.4 2.0 hypothetical protein compare
SGL_RS19255 +0.4 1.2 transposase compare
SGL_RS13670 +0.4 1.2 thioredoxin compare
SGL_RS10695 +0.4 2.9 pilus assembly protein compare
SGL_RS15385 +0.4 1.0 potassium channel family protein compare
SGL_RS08015 +0.4 0.8 DUF29 family protein compare
SGL_RS17925 +0.4 2.0 hypothetical protein compare
SGL_RS04785 +0.4 1.9 CPP1-like family protein compare
SGL_RS08350 +0.4 1.1 peroxiredoxin-like family protein compare
SGL_RS18705 +0.4 2.3 IS1 family transposase compare
SGL_RS06270 +0.4 0.8 class III poly(R)-hydroxyalkanoic acid synthase subunit PhaC compare
SGL_RS16060 +0.3 2.6 efflux RND transporter periplasmic adaptor subunit compare
SGL_RS18620 +0.3 1.9 HNH endonuclease compare
SGL_RS06965 +0.3 1.7 hypothetical protein compare
SGL_RS04975 +0.3 1.3 hypothetical protein compare
SGL_RS14360 +0.3 1.6 carbon-nitrogen hydrolase family protein compare
SGL_RS07785 +0.3 1.1 hypothetical protein compare
SGL_RS06855 +0.3 1.9 hypothetical protein compare
SGL_RS10340 +0.3 2.8 AGE family epimerase/isomerase compare
SGL_RS19595 +0.3 1.1 hypothetical protein compare
SGL_RS04565 +0.3 1.5 hypothetical protein compare
SGL_RS03480 +0.3 1.7 Uma2 family endonuclease compare
SGL_RS00370 +0.3 1.8 YwqG family protein compare
SGL_RS00605 +0.3 1.4 hypothetical protein compare
SGL_RS18690 +0.3 1.2 DUF4351 domain-containing protein compare
SGL_RS00060 +0.3 2.0 hypothetical protein compare
SGL_RS05195 +0.3 1.0 ferredoxin compare
SGL_RS00920 +0.3 1.2 hypothetical protein compare
SGL_RS09990 +0.3 0.8 NAD(P)H-quinone oxidoreductase subunit N compare
SGL_RS00240 +0.3 1.4 cyanoexosortase A system-associated protein compare
SGL_RS09855 +0.3 0.6 slipin family protein compare
SGL_RS18490 +0.3 0.9 hypothetical protein compare
SGL_RS20190 +0.3 0.9 hypothetical protein compare
SGL_RS18720 +0.3 2.1 IS1 family transposase compare
SGL_RS12315 +0.3 0.9 hypothetical protein compare
SGL_RS00600 +0.3 1.0 hypothetical protein compare
SGL_RS12055 +0.3 1.7 DUF6439 family protein compare
SGL_RS08575 +0.3 1.0 hypothetical protein compare
SGL_RS12180 +0.3 1.0 type II toxin-antitoxin system HicB family antitoxin compare
SGL_RS01195 +0.3 0.9 PIN domain-containing protein compare
SGL_RS17940 +0.3 1.2 hypothetical protein compare
SGL_RS08165 +0.3 2.1 sigma-70 family RNA polymerase sigma factor compare
SGL_RS06510 +0.3 2.1 YdiU family protein compare
SGL_RS19765 +0.3 1.1 BrnT family toxin compare
SGL_RS03305 +0.3 2.2 CO2 hydration protein compare
SGL_RS15765 +0.3 1.2 mechanosensitive ion channel family protein compare
SGL_RS05215 +0.3 0.6 TIGR02450 family Trp-rich protein compare
SGL_RS05595 +0.3 1.9 GAF domain-containing protein compare
SGL_RS03475 +0.3 2.3 tRNA dihydrouridine(20/20a) synthase DusA compare
SGL_RS02545 +0.3 1.3 histone deacetylase compare
SGL_RS09515 +0.3 1.1 glycosyltransferase family 2 protein compare
SGL_RS15060 +0.3 1.8 PstS family phosphate ABC transporter substrate-binding protein compare
SGL_RS03270 +0.3 0.7 HNH endonuclease compare
SGL_RS11475 +0.3 1.0 ATP-dependent Clp protease adapter ClpS compare
SGL_RS10690 +0.3 2.0 PilN domain-containing protein compare
SGL_RS03195 +0.3 1.8 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE compare
SGL_RS00250 +0.3 1.6 WecB/TagA/CpsF family glycosyltransferase compare
SGL_RS15195 +0.3 0.8 hypothetical protein compare
SGL_RS19535 +0.3 1.9 hypothetical protein compare
SGL_RS09745 +0.3 1.3 bidirectional hydrogenase complex protein HoxU compare
SGL_RS11810 +0.3 2.2 urea ABC transporter substrate-binding protein compare
SGL_RS07225 +0.3 0.7 Uma2 family endonuclease compare
SGL_RS04635 +0.3 1.2 hypothetical protein compare
SGL_RS14890 +0.3 1.0 NAD(P)H-quinone oxidoreductase subunit O compare
SGL_RS02350 +0.3 1.1 type II toxin-antitoxin system YhaV family toxin compare
SGL_RS17580 +0.3 1.5 ATP-binding protein compare
SGL_RS09195 +0.3 2.0 hybrid sensor histidine kinase/response regulator compare
SGL_RS01825 +0.3 0.6 type II toxin-antitoxin system HigB family toxin compare
SGL_RS12790 +0.3 0.8 dynamin-like GTPase family protein compare
SGL_RS17115 +0.3 1.5 DUF3370 domain-containing protein compare
SGL_RS16225 +0.3 1.3 heavy metal-responsive transcriptional regulator compare
SGL_RS14810 +0.3 1.1 DUF4090 family protein compare
SGL_RS18675 +0.3 1.4 hypothetical protein compare
SGL_RS01815 +0.3 1.4 restriction endonuclease subunit S compare
SGL_RS14130 +0.3 1.1 hypothetical protein compare
SGL_RS00330 +0.3 0.9 hypothetical protein compare
SGL_RS16165 +0.3 1.6 LuxR C-terminal-related transcriptional regulator compare
SGL_RS16210 +0.3 1.4 CYTH domain-containing protein compare
SGL_RS13220 +0.3 1.6 ribonuclease III compare
SGL_RS13745 +0.3 0.8 PIN domain-containing protein compare
SGL_RS18710 +0.3 0.3 DUF3155 domain-containing protein compare
SGL_RS02365 +0.3 1.1 DUF3181 family protein compare
SGL_RS14965 +0.3 1.8 DUF2779 domain-containing protein compare
SGL_RS19590 +0.3 0.4 hypothetical protein compare
SGL_RS08215 +0.3 1.1 YidH family protein compare
SGL_RS19610 +0.3 1.0 hypothetical protein compare
SGL_RS14520 +0.2 0.7 type II toxin-antitoxin system HicB family antitoxin compare
SGL_RS17935 +0.2 0.3 hypothetical protein compare
SGL_RS06255 +0.2 1.4 Tic20 family protein compare
SGL_RS02040 +0.2 1.0 DUF1636 family protein compare
SGL_RS07445 +0.2 1.7 SpoIIE family protein phosphatase compare
SGL_RS05505 +0.2 2.0 TIGR03279 family radical SAM protein compare
SGL_RS06610 +0.2 0.7 RlpA-like double-psi beta-barrel domain-containing protein compare
SGL_RS01090 +0.2 1.0 hypothetical protein compare
SGL_RS17440 +0.2 1.8 RNA polymerase sigma factor SigF compare
SGL_RS07590 +0.2 1.6 hydrogenase maturation protease compare
SGL_RS13950 +0.2 2.1 GspE/PulE family protein compare
SGL_RS12095 +0.2 0.7 YoaK family protein compare
SGL_RS10840 +0.2 1.0 hypothetical protein compare
SGL_RS17750 +0.2 1.6 circadian clock protein KaiA compare
SGL_RS10605 +0.2 1.5 Crp/Fnr family transcriptional regulator compare
SGL_RS00450 +0.2 0.6 recombinase family protein compare
SGL_RS03100 +0.2 0.9 DUF2288 domain-containing protein compare
SGL_RS08475 +0.2 1.4 MBL fold metallo-hydrolase compare
SGL_RS08675 +0.2 0.4 hypothetical protein compare
SGL_RS15420 +0.2 1.0 DevA family ABC transporter ATP-binding protein compare
SGL_RS19990 +0.2 0.6 SID1 transmembrane family member compare
SGL_RS18510 +0.2 0.8 HNH endonuclease compare
SGL_RS17535 +0.2 1.5 DUF2231 domain-containing protein compare
SGL_RS03035 +0.2 1.6 diguanylate cyclase compare
SGL_RS14975 +0.2 0.6 translation initiation factor compare
SGL_RS03085 +0.2 1.1 DUF2862 domain-containing protein compare
SGL_RS13920 +0.2 1.1 hypothetical protein compare
SGL_RS19080 +0.2 0.7 Rpn family recombination-promoting nuclease/putative transposase compare
SGL_RS18025 +0.2 1.1 hypothetical protein compare
SGL_RS15720 +0.2 1.5 hypothetical protein compare
SGL_RS05360 +0.2 1.3 cation:proton antiporter subunit C compare
SGL_RS04610 +0.2 1.2 Uma2 family endonuclease compare
SGL_RS18340 +0.2 0.9 hypothetical protein compare
SGL_RS09780 +0.2 1.5 SDR family oxidoreductase compare
SGL_RS10650 +0.2 0.8 DUF2808 domain-containing protein compare
SGL_RS03095 +0.2 1.5 peptide-methionine (S)-S-oxide reductase MsrA compare
SGL_RS20030 +0.2 1.3 iron uptake porin compare
SGL_RS14405 +0.2 1.1 DUF29 family protein compare
SGL_RS14685 +0.2 1.1 hypothetical protein compare
SGL_RS08665 +0.2 1.4 DUF4129 domain-containing protein compare
SGL_RS13080 +0.2 1.0 rhodanese-related sulfurtransferase compare
SGL_RS12955 +0.2 0.6 lactoylglutathione lyase compare
SGL_RS06910 +0.2 0.8 DUF2442 domain-containing protein compare
SGL_RS02655 +0.2 1.1 S41 family peptidase compare
SGL_RS14100 +0.2 1.1 gamma-glutamylcyclotransferase compare
SGL_RS00365 +0.2 1.6 alpha/beta hydrolase compare
SGL_RS07490 +0.2 1.9 deoxyribose-phosphate aldolase compare
SGL_RS11820 +0.2 1.0 pentapeptide repeat-containing protein compare


Specific Phenotypes

None in this experiment

For Synechocystis sp000284455 PCC 6803 in nitrogen source experiments