Experiment set1S102 for Synechocystis sp000284455 PCC 6803

Compare to:

Arg 10 mM as N source, buffered with 20 mM TES pH8

200 most important genes:

  gene name fitness t score description  
SGL_RS13910 -7.6 -5.2 phasin family protein compare
SGL_RS16670 -7.5 -12.5 DUF5942 domain-containing protein compare
SGL_RS13465 -7.3 -8.7 class II fumarate hydratase compare
SGL_RS10775 -6.7 -6.5 DUF3326 domain-containing protein compare
SGL_RS15655 -6.1 -14.9 asparaginase compare
SGL_RS15700 -6.0 -9.9 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
SGL_RS16705 -5.9 -4.0 diadenylate cyclase CdaA compare
SGL_RS17125 -5.8 -4.0 inositol monophosphatase family protein compare
SGL_RS09430 -5.7 -19.4 leucyl aminopeptidase compare
SGL_RS16545 -5.7 -10.2 LdpA C-terminal domain-containing domain compare
SGL_RS04510 -5.5 -5.4 DUF561 domain-containing protein compare
SGL_RS03520 -5.4 -5.2 ABC transporter permease compare
SGL_RS06130 -5.2 -3.6 anti-sigma regulatory factor compare
SGL_RS03540 -5.2 -7.9 ABC transporter ATP-binding protein compare
SGL_RS15840 -5.2 -9.1 class A beta-lactamase compare
SGL_RS16940 -4.9 -3.4 dephospho-CoA kinase compare
SGL_RS02515 -4.8 -4.7 M56 family metallopeptidase compare
SGL_RS05465 -4.6 -3.1 hypothetical protein compare
SGL_RS12870 -4.5 -4.3 YqeG family HAD IIIA-type phosphatase compare
SGL_RS02955 -4.3 -3.9 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS13870 -4.3 -3.0 rRNA maturation RNase YbeY compare
SGL_RS12335 -4.3 -5.1 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SGL_RS11170 -4.3 -19.8 L-glutamate gamma-semialdehyde dehydrogenase compare
SGL_RS15045 -4.3 -6.5 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
SGL_RS03250 -4.3 -2.9 tRNA (guanosine(37)-N1)-methyltransferase TrmD compare
SGL_RS08765 -4.3 -2.9 2-phosphosulfolactate phosphatase family protein compare
SGL_RS05980 -4.2 -2.9 hypothetical protein compare
SGL_RS16880 -4.2 -4.0 3'(2'),5'-bisphosphate nucleotidase CysQ compare
SGL_RS04775 -4.2 -5.1 alpha/beta hydrolase compare
SGL_RS03840 -4.2 -2.8 adenylyl-sulfate kinase compare
SGL_RS17085 -4.2 -17.5 TIGR00300 family protein compare
SGL_RS07180 -4.1 -4.0 carboxynorspermidine decarboxylase compare
SGL_RS02665 -4.1 -2.8 nickel pincer cofactor biosynthesis protein LarC compare
SGL_RS17405 -4.1 -7.7 L-2-hydroxyglutarate oxidase compare
SGL_RS12745 -4.0 -2.7 glycine cleavage system aminomethyltransferase GcvT compare
SGL_RS12490 -4.0 -4.7 glutamate--cysteine ligase compare
SGL_RS17470 -3.9 -2.7 nickel pincer cofactor biosynthesis protein LarB compare
SGL_RS17650 -3.8 -2.6 hypothetical protein compare
SGL_RS04025 -3.8 -7.3 proton extrusion protein PcxA compare
SGL_RS14510 -3.8 -4.7 DUF3177 family protein compare
SGL_RS14445 -3.8 -2.6 hypothetical protein compare
SGL_RS03090 -3.7 -14.9 ArsA family ATPase compare
SGL_RS10130 -3.7 -15.6 fatty acid desaturase compare
SGL_RS08175 -3.7 -2.5 serine hydrolase compare
SGL_RS18325 -3.7 -9.3 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS16770 -3.7 -6.5 LptF/LptG family permease compare
SGL_RS11135 -3.5 -2.4 D-alanyl-D-alanine dipeptidase DdpX compare
SGL_RS05470 -3.5 -2.4 dihydropteroate synthase compare
SGL_RS14430 -3.5 -3.4 cobalt ECF transporter T component CbiQ compare
SGL_RS03380 -3.5 -7.4 sulfite reductase, ferredoxin dependent compare
SGL_RS16100 -3.5 -7.0 heavy metal translocating P-type ATPase compare
SGL_RS14860 -3.4 -2.3 8-amino-7-oxononanoate synthase compare
SGL_RS14575 -3.4 -2.3 RNA-binding protein compare
SGL_RS04810 -3.3 -2.3 AarF/ABC1/UbiB kinase family protein compare
SGL_RS14620 -3.3 -10.3 CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein compare
SGL_RS12575 -3.3 -3.1 riboflavin synthase compare
SGL_RS13535 -3.2 -3.1 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
SGL_RS07305 -3.2 -8.6 N-acetylmuramic acid 6-phosphate etherase compare
SGL_RS17500 -3.2 -3.7 DUF370 domain-containing protein compare
SGL_RS06110 -3.2 -4.8 glycosyltransferase family 4 protein compare
SGL_RS12030 -3.1 -2.2 extracellular solute-binding protein compare
SGL_RS18120 -3.1 -15.3 5'/3'-nucleotidase SurE compare
SGL_RS03970 -3.1 -2.1 thiamine phosphate synthase compare
SGL_RS11955 -3.1 -3.7 aminomethyl-transferring glycine dehydrogenase compare
SGL_RS13495 -3.1 -9.7 AarF/ABC1/UbiB kinase family protein compare
SGL_RS12235 -3.1 -2.9 aminopeptidase P N-terminal domain-containing protein compare
SGL_RS11775 -3.1 -6.6 isoaspartyl peptidase/L-asparaginase compare
SGL_RS03625 -3.1 -8.8 glycosyltransferase family 1 protein compare
SGL_RS07840 -3.1 -2.9 SDR family NAD(P)-dependent oxidoreductase compare
SGL_RS05440 -3.0 -2.1 ACP S-malonyltransferase compare
SGL_RS17520 -3.0 -3.5 DUF3352 domain-containing protein compare
SGL_RS06730 -2.9 -12.7 succinate dehydrogenase/fumarate reductase flavoprotein subunit compare
SGL_RS13555 -2.9 -4.0 aldehyde oxygenase (deformylating) compare
SGL_RS09395 -2.9 -2.0 aldo/keto reductase compare
SGL_RS09150 -2.9 -8.4 acetolactate synthase large subunit compare
SGL_RS15560 -2.8 -2.7 dethiobiotin synthase compare
SGL_RS02305 -2.8 -9.9 NAD-dependent malic enzyme compare
SGL_RS11675 -2.8 -4.6 chromophore lyase CpcT/CpeT compare
SGL_RS14425 -2.8 -2.7 energy-coupling factor ABC transporter ATP-binding protein compare
SGL_RS11000 -2.8 -3.8 sulfate adenylyltransferase compare
SGL_RS04230 -2.8 -3.7 exonuclease subunit SbcC compare
SGL_RS08045 -2.8 -13.3 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
SGL_RS10320 -2.8 -1.9 ribosome biogenesis GTPase Der compare
SGL_RS07675 -2.7 -4.1 HpsJ family protein compare
SGL_RS03790 -2.7 -2.6 GTPase ObgE compare
SGL_RS09385 -2.7 -1.8 2-carboxy-1,4-naphthoquinone phytyltransferase compare
SGL_RS08275 -2.7 -1.8 tetratricopeptide repeat protein compare
SGL_RS06675 -2.7 -4.7 ABC transporter ATP-binding protein compare
SGL_RS14920 -2.7 -3.0 cation:proton antiporter compare
SGL_RS12770 -2.7 -1.8 uroporphyrinogen-III C-methyltransferase compare
SGL_RS08710 -2.6 -3.0 folylpolyglutamate synthase/dihydrofolate synthase family protein compare
SGL_RS04720 -2.6 -1.8 iron uptake porin compare
SGL_RS14335 -2.6 -2.4 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase compare
SGL_RS11835 -2.6 -1.8 transcription antitermination factor NusB compare
SGL_RS16950 -2.5 -7.1 phosphoketolase compare
SGL_RS13195 -2.5 -5.5 Ig-like domain-containing protein compare
SGL_RS03060 -2.5 -3.3 phosphoadenosine phosphosulfate reductase compare
SGL_RS01905 -2.5 -8.6 GDP-mannose 4,6-dehydratase compare
SGL_RS06370 -2.5 -7.6 cysteine synthase A compare
SGL_RS13055 -2.5 -1.7 protein translocase subunit SecF compare
SGL_RS14045 -2.5 -3.9 hypothetical protein compare
SGL_RS10155 -2.5 -3.6 hypothetical protein compare
SGL_RS17305 -2.4 -2.8 pyrroline-5-carboxylate reductase compare
SGL_RS05435 -2.4 -2.3 heavy metal translocating P-type ATPase compare
SGL_RS02795 -2.4 -7.0 flavin prenyltransferase UbiX compare
SGL_RS18300 -2.4 -3.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SGL_RS03845 -2.4 -5.0 MotA/TolQ/ExbB proton channel family protein compare
SGL_RS10480 -2.4 -11.1 metallophosphoesterase family protein compare
SGL_RS12755 -2.4 -10.1 IMS domain-containing protein compare
SGL_RS17685 -2.4 -10.2 ArsB/NhaD family transporter compare
SGL_RS01900 -2.4 -5.2 GDP-L-fucose synthase compare
SGL_RS04215 -2.4 -4.1 MlaE family lipid ABC transporter permease subunit compare
SGL_RS03420 -2.4 -6.6 UbiD family decarboxylase compare
SGL_RS16360 -2.3 -3.1 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
SGL_RS07935 -2.3 -4.1 hypothetical protein compare
SGL_RS05210 -2.3 -6.8 SLBB domain-containing protein compare
SGL_RS12585 -2.3 -2.2 ABC transporter permease subunit compare
SGL_RS14105 -2.3 -2.2 2-succinylbenzoate--CoA ligase compare
SGL_RS03675 -2.3 -3.4 hypothetical protein compare
SGL_RS04390 -2.3 -1.5 DUF433 domain-containing protein compare
SGL_RS13550 -2.3 -1.3 long-chain acyl-[acyl-carrier-protein] reductase compare
SGL_RS13685 -2.3 -9.0 ABC transporter ATP-binding protein compare
SGL_RS14560 -2.3 -4.4 hypothetical protein compare
SGL_RS09720 -2.3 -2.6 beta-ketoacyl-ACP synthase compare
SGL_RS07945 -2.3 -3.6 type IV pilin-like G/H family protein compare
SGL_RS09640 -2.2 -10.3 peptide chain release factor N(5)-glutamine methyltransferase compare
SGL_RS13510 -2.2 -3.9 transglycosylase domain-containing protein compare
SGL_RS11655 -2.2 -2.9 iron export ABC transporter permease subunit FetB compare
SGL_RS03775 -2.2 -3.9 membrane protein compare
SGL_RS08650 -2.2 -4.3 S-layer homology domain-containing protein compare
SGL_RS12985 -2.2 -2.9 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase compare
SGL_RS12400 -2.2 -1.5 lysophospholipid acyltransferase family protein compare
SGL_RS07650 -2.2 -10.2 aminoglycoside phosphotransferase family protein compare
SGL_RS02145 -2.2 -8.5 metallophosphoesterase compare
SGL_RS03460 -2.2 -8.6 hypothetical protein compare
SGL_RS03365 -2.2 -2.7 Ycf66 family protein compare
SGL_RS02740 -2.2 -7.2 HAS-barrel domain-containing protein compare
SGL_RS09905 -2.1 -3.7 biotin/lipoate A/B protein ligase family protein compare
SGL_RS02375 -2.1 -7.6 DUF3086 domain-containing protein compare
SGL_RS15425 -2.1 -5.7 cobalamin biosynthesis protein CobW compare
SGL_RS03950 -2.1 -8.1 homocysteine biosynthesis protein compare
SGL_RS15530 -2.1 -2.4 phosphoribosylformylglycinamidine synthase subunit PurQ compare
SGL_RS05560 -2.1 -2.8 DegT/DnrJ/EryC1/StrS family aminotransferase compare
SGL_RS03505 -2.1 -13.5 exopolysaccharide transport family protein compare
SGL_RS03430 -2.1 -5.7 DUF4335 domain-containing protein compare
SGL_RS17740 -2.1 -8.1 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
SGL_RS11510 -2.0 -3.3 dihydroneopterin aldolase compare
SGL_RS18180 -2.0 -5.5 ABC transporter permease compare
SGL_RS14905 -2.0 -3.3 30S ribosomal protein PSRP-3 compare
SGL_RS02580 -2.0 -2.8 DUF1818 family protein compare
SGL_RS10160 -2.0 -4.7 B12-binding domain-containing radical SAM protein compare
SGL_RS15130 -2.0 -10.6 dTDP-glucose 4,6-dehydratase compare
SGL_RS07870 -2.0 -2.6 Ycf51 family protein compare
SGL_RS12690 -2.0 -7.8 hypothetical protein compare
SGL_RS17340 -2.0 -1.7 quinolinate synthase NadA compare
SGL_RS14025 -1.9 -9.4 gamma-glutamyl-phosphate reductase compare
SGL_RS10245 -1.9 -6.3 glycoside hydrolase family protein compare
SGL_RS03550 -1.9 -12.8 CDP-glucose 4,6-dehydratase compare
SGL_RS15790 -1.9 -7.2 hypothetical protein compare
SGL_RS09695 -1.9 -4.1 hybrid sensor histidine kinase/response regulator compare
SGL_RS02475 -1.9 -1.5 YlxR family protein compare
SGL_RS02220 -1.9 -2.5 phosphoribosylformylglycinamidine synthase subunit PurL compare
SGL_RS02095 -1.9 -5.3 dTDP-4-dehydrorhamnose reductase compare
SGL_RS04085 -1.9 -2.7 YlqD family protein compare
SGL_RS07605 -1.8 -2.3 HEAT repeat domain-containing protein compare
SGL_RS17230 -1.8 -5.8 L-aspartate oxidase compare
SGL_RS08790 -1.8 -2.1 carbohydrate ABC transporter permease compare
SGL_RS03185 -1.8 -2.4 biotin--[acetyl-CoA-carboxylase] ligase compare
SGL_RS12660 -1.8 -8.3 DNA double-strand break repair nuclease NurA compare
SGL_RS11305 -1.8 -3.6 carboxylating nicotinate-nucleotide diphosphorylase compare
SGL_RS14930 -1.7 -6.0 type I methionyl aminopeptidase compare
SGL_RS15620 -1.7 -1.9 cobyric acid synthase CobQ compare
SGL_RS10065 -1.7 -10.1 four-carbon acid sugar kinase family protein compare
SGL_RS13370 -1.7 -2.9 exonuclease SbcCD subunit D compare
SGL_RS04735 -1.7 -2.4 hypothetical protein compare
SGL_RS04660 -1.7 -3.5 phycobilisome rod-core linker polypeptide compare
SGL_RS03425 -1.7 -1.6 precorrin-3B C(17)-methyltransferase compare
SGL_RS06020 -1.6 -3.7 sugar ABC transporter permease compare
SGL_RS11885 -1.6 -6.8 fatty acid desaturase compare
SGL_RS12685 -1.6 -1.8 hypothetical protein compare
SGL_RS15870 -1.6 -5.7 septum site-determining protein MinC compare
SGL_RS14435 -1.6 -1.4 cobalt transporter CbiM compare
SGL_RS13915 -1.6 -3.1 tRNA-Ala compare
SGL_RS10420 -1.6 -2.8 methionine ABC transporter ATP-binding protein compare
SGL_RS05880 -1.6 -2.2 sugar ABC transporter substrate-binding protein compare
SGL_RS07170 -1.6 -2.1 glycine cleavage system protein GcvH compare
SGL_RS08115 -1.6 -3.2 NAD(P)/FAD-dependent oxidoreductase compare
SGL_RS15785 -1.6 -5.5 ParA family protein compare
SGL_RS07200 -1.6 -1.8 LCP family protein compare
SGL_RS16735 -1.6 -1.7 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
SGL_RS04995 -1.6 -2.9 hypothetical protein compare
SGL_RS04340 -1.6 -7.3 type I glutamate--ammonia ligase compare
SGL_RS09660 -1.5 -8.4 RelA/SpoT family protein compare
SGL_RS15865 -1.5 -2.8 septum site-determining protein MinD compare
SGL_RS12340 -1.5 -7.6 hypothetical protein compare
SGL_RS02280 -1.5 -6.4 Rne/Rng family ribonuclease compare
SGL_RS13490 -1.5 -4.0 aspartate aminotransferase compare
SGL_RS13560 -1.5 -8.1 glucose-1-phosphate thymidylyltransferase compare
SGL_RS12000 -1.5 -6.2 type II CAAX endopeptidase family protein compare
SGL_RS06440 -1.5 -3.4 NAD-dependent epimerase/dehydratase family protein compare


Specific Phenotypes

For 3 genes in this experiment

For nitrogen source L-Arginine in Synechocystis sp000284455 PCC 6803

For nitrogen source L-Arginine across organisms