Experiment set1IT093 for Pseudomonas fluorescens FW300-N2E3

Compare to:

LB with copper (II) chloride dihydrate 2.5 mM

Group: stress
Media: LB + copper (II) chloride dihydrate (2.5 mM), pH=7
Culturing: pseudo3_N2E3_ML2, 48 well microplate; Tecan Infinite F200, Aerobic, at 28 (C), shaken=200 rpm
By: Jayashree on 4/28/2014
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: 892 B7,B8

Specific Phenotypes

For 10 genes in this experiment

For stress copper (II) chloride dihydrate in Pseudomonas fluorescens FW300-N2E3

For stress copper (II) chloride dihydrate across organisms

SEED Subsystems

Subsystem #Specific
Copper homeostasis 2
Biogenesis of c-type cytochromes 1
Lysine degradation 1
Orphan regulatory proteins 1
Periplasmic disulfide interchange 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
thiosulfate disproportionation IV (rhodanese) 1 1 1
L-cysteine degradation III 2 1 1
sulfide oxidation IV (mitochondria) 5 2 1