Experiment set1IT093 for Caulobacter crescentus NA1000

Compare to:

L-Isoleucine nitrogen source

200 most detrimental genes:

  gene name fitness t score description  
CCNA_03281 +11.6 78.8 AsnC-family transcriptional regulator compare
CCNA_01242 +3.4 24.4 amino acid permease compare
CCNA_02250 +2.2 4.1 methylcrotonyl-CoA carboxylase biotin-containing subunit compare
CCNA_01060 +1.8 6.8 type I protein secretion ATP-binding protein RsaD compare
CCNA_01583 +1.7 2.7 phosphate-binding protein compare
CCNA_01059 +1.6 11.8 S-layer protein rsaA compare
CCNA_02028 +1.5 2.4 NTF2 superfamily protein compare
CCNA_00020 +1.4 1.1 hypothetical protein compare
CCNA_02133 +1.4 4.7 glucokinase compare
CCNA_01771 +1.4 1.7 hypothetical protein compare
CCNA_02132 +1.3 3.9 LacI-family transcriptional regulator compare
CCNA_02878 +1.3 1.0 hypothetical protein compare
CCNA_02646 +1.3 1.5 cell division protein MraZ compare
CCNA_01814 +1.2 8.2 nitrogen regulation protein ntrB compare
CCNA_03030 +1.2 5.3 cytochrome c2 compare
CCNA_00507 +1.2 5.8 cytochrome c1 compare
CCNA_01774 +1.2 1.7 phosphoribosylglycinamide formyltransferase compare
CCNA_02315 +1.2 2.2 Cro/CI-family transcriptional regulator compare
CCNA_01815 +1.2 6.9 nitrogen assimilation regulatory protein NtrC compare
CCNA_03861 +1.1 3.6 pyridoxal 5'-phosphate dependent enzyme class III compare
CCNA_02576 +1.1 7.9 phosphoribosylamidoimidazole-succinocarboxamide synthase compare
CCNA_03832 +1.1 3.4 TetR-family transcriptional regulator compare
CCNA_02037 +1.1 4.9 ATP-dependent endopeptidase Lon compare
CCNA_03964 +1.1 2.7 hypothetical protein compare
CCNA_01739 +1.1 4.3 LSU ribosomal protein L9P compare
CCNA_02534 +1.1 2.2 hypothetical protein compare
CCNA_03132 +1.1 5.1 transcriptional regulator, antitoxin protein higA compare
CCNA_03524 +1.1 4.2 di-/tripeptide transporter compare
CCNA_02021 +1.0 4.1 hypothetical protein compare
CCNA_03954 +1.0 1.6 hypothetical protein compare
CCNA_00506 +1.0 4.3 cytochrome b compare
CCNA_03452 +1.0 2.8 hypothetical protein compare
CCNA_01848 +1.0 5.3 quinol cytochrome oxidase polypeptide IV compare
CCNA_03384 +1.0 1.6 LSU ribosomal protein L31P compare
CCNA_02941 +1.0 2.8 transcription elongation factor greA compare
CCNA_01752 +1.0 4.8 YicC-family protein compare
CCNA_01730 +1.0 5.6 amidophosphoribosyltransferase compare
CCNA_01220 +1.0 3.9 7-keto-8-aminopelargonate synthetase compare
CCNA_01851 +0.9 6.9 quinol cytochrome oxidase polypeptide II compare
CCNA_03787 +0.9 2.9 heme exporter protein D CcmD compare
CCNA_02575 +0.9 4.5 hypothetical protein compare
CCNA_02071 +0.9 1.3 protein translocase subunit YajC compare
CCNA_02000 +0.9 1.2 SSU ribosomal protein S2P compare
CCNA_03740 +0.9 5.0 cysteine synthase compare
CCNA_02942 +0.9 2.7 nucleoside-diphosphate-sugar epimerase compare
CCNA_03514 +0.9 5.2 cytochrome c oxidase assembly protein ctaG compare
CCNA_01037 +0.9 4.9 GntR-family transcriptional regulator compare
CCNA_01061 +0.9 3.5 type I secretion adaptor protein RsaE compare
CCNA_00505 +0.9 4.2 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_01681 +0.9 3.7 RimI-like acetyltransferase compare
CCNA_01449 +0.9 1.7 fructose-1,6-bisphosphatase, FIG superfamily compare
CCNA_03982 +0.9 1.8 hypothetical protein compare
CCNA_01790 +0.9 3.1 protein translocase subunit secG compare
CCNA_01968 +0.9 2.5 pentapeptide repeats containing protein compare
CCNA_02957 +0.9 3.0 ArsR-family transcriptional regulator compare
CCNA_02063 +0.9 2.6 beta-barrel assembly machine (BAM) protein BamD compare
CCNA_01849 +0.8 4.8 quinol cytochrome oxidase polypeptide III compare
CCNA_00699 +0.8 3.4 LSU ribosomal protein L28P compare
CCNA_02199 +0.8 5.5 methyltransferase compare
CCNA_01195 +0.8 5.7 LacI-family transcriptional regulator compare
CCNA_02316 +0.8 4.5 hypothetical protein compare
CCNA_03513 +0.8 4.9 cytochrome c oxidase subunit III coxC compare
CCNA_03280 +0.8 7.4 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_03635 +0.8 1.0 hypothetical protein compare
CCNA_01780 +0.8 5.3 exopolyphosphatase compare
CCNA_00848 +0.8 1.2 leucine-responsive regulatory protein compare
CCNA_02297 +0.8 2.9 hypoxanthine-guanine phosphoribosyltransferase compare
CCNA_02309 +0.8 3.6 EF hand domain protein compare
CCNA_00296 +0.8 2.7 phosphate regulon response regulator PhoB compare
CCNA_03327 +0.8 3.5 hypothetical protein compare
CCNA_00264 +0.8 4.1 C4-dicarboxylate transport protein compare
CCNA_01578 +0.8 2.7 beta-lactamase repressor compare
CCNA_02761 +0.8 3.1 hypothetical protein compare
CCNA_01685 +0.8 3.0 hemimethylated DNA-binding protein yccV compare
CCNA_01573 +0.8 4.0 ArsR-family transcriptional regulator compare
CCNA_01947 +0.8 1.6 thioredoxin peroxidase compare
CCNA_01520 +0.8 2.5 hypothetical protein compare
CCNA_03518 +0.8 5.0 cytochrome c oxidase polypeptide II coxB compare
CCNA_02970 +0.8 1.3 putative thiol-disulfide oxidoreductase compare
CCNA_00769 +0.8 4.5 TetR family transcriptional regulator compare
CCNA_02025 +0.8 2.0 hypothetical protein compare
CCNA_01405 +0.7 3.0 GIY-YIG domain protein compare
CCNA_03352 +0.7 3.0 YebC/PmpR transcriptional regulator compare
CCNA_01751 +0.7 2.5 aminodeoxychorismate lyase compare
CCNA_02729 +0.7 3.9 oligopeptide transporter compare
CCNA_02026 +0.7 2.9 hypothetical protein compare
CCNA_00459 +0.7 4.9 Na+/H+ antiporter nhaA compare
CCNA_01561 +0.7 2.1 hypothetical protein compare
CCNA_03287 +0.7 3.5 PadR-family transcriptional regulator compare
CCNA_00803 +0.7 3.8 chemotaxis protein cheW compare
CCNA_02434 +0.7 2.6 hypothetical protein compare
CCNA_03260 +0.7 1.5 queuosine biosynthesis protein QueD compare
CCNA_03609 +0.7 2.6 outer membrane protein compare
CCNA_01804 +0.7 4.4 glutathione peroxidase compare
CCNA_02252 +0.7 1.0 methylcrotonyl-CoA carboxylase carboxyl transferase subunit compare
CCNA_00032 +0.7 1.9 antitoxin protein VapB compare
CCNA_01728 +0.7 3.4 short chain dehydrogenase compare
CCNA_01712 +0.7 5.0 CopY/TcrY family transcriptional repressor compare
CCNA_02695 +0.7 2.2 hypothetical protein compare
CCNA_03961 +0.7 2.6 hypothetical protein compare
CCNA_00518 +0.7 2.9 LSU ribosomal protein L25P compare
CCNA_01420 +0.7 1.7 NrdR family transcriptional regulator compare
CCNA_01826 +0.7 3.3 vitamin B12 receptor compare
CCNA_01926 +0.7 3.9 GGDEF diguanylate cyclase DgcB compare
CCNA_02447 +0.7 5.1 PspA/IM30 family regulatory protein compare
CCNA_03043 +0.7 2.4 type IV pilin protein pilA compare
CCNA_00684 +0.7 2.5 anti-sigma factor, ChrR-family compare
CCNA_02467 +0.7 3.1 polyisoprenylphosphate hexose-1-phosphotransferase pssZ compare
CCNA_00017 +0.7 2.3 molybdopterin converting factor, small subunit compare
CCNA_01655 +0.7 3.1 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_02034 +0.7 3.5 luciferase-like monooxygenase compare
CCNA_03067 +0.7 3.8 MarR-family transcriptional regulator compare
CCNA_01116 +0.7 3.5 histidine protein kinase DivJ compare
CCNA_03762 +0.7 1.2 acetolactate synthase-related protein compare
CCNA_00847 +0.7 2.6 leucine-responsive regulatory protein compare
CCNA_00846 +0.6 5.6 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_01979 +0.6 2.4 LexA repressor compare
CCNA_03824 +0.6 2.8 2-polyprenylphenol 6-hydroxylase accessory protein UbiB compare
CCNA_02448 +0.6 4.9 hypothetical protein compare
CCNA_02835 +0.6 1.4 CpxP-related protein compare
CCNA_02042 +0.6 3.2 trigger factor chaperone compare
CCNA_01742 +0.6 3.5 hypothetical protein compare
CCNA_01617 +0.6 2.5 acetyltransferase compare
CCNA_01840 +0.6 4.0 MerR-family transcriptional regulator compare
CCNA_00972 +0.6 1.9 hypothetical protein compare
CCNA_01174 +0.6 2.2 LysR-family transcriptional regulator compare
CCNA_00895 +0.6 1.5 hypothetical protein compare
CCNA_01608 +0.6 3.1 TetR-family transcriptional regulator compare
CCNA_01813 +0.6 3.1 tRNA-dihydrouridine synthase compare
CCNA_01057 +0.6 4.7 hypothetical protein compare
CCNA_01074 +0.6 1.5 entericidin B-like protein compare
CCNA_01827 +0.6 3.5 cobyric acid synthase CobQ compare
CCNA_02737 +0.6 1.7 queuosine biosynthesis protein QueF compare
CCNA_02644 +0.6 1.6 cell division protein FtsL compare
CCNA_02350 +0.6 1.7 dimeric ferredoxin-like protein compare
CCNA_03913 +0.6 0.7 hypothetical protein compare
CCNA_02616 +0.6 4.6 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_02619 +0.6 4.8 stomatin/prohibitin-related protein compare
CCNA_00028 +0.6 1.5 TonB-dependent receptor compare
CCNA_00207 +0.6 2.8 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B compare
CCNA_01355 +0.6 2.8 transcriptional regulator IolR compare
CCNA_03818 +0.6 1.2 hypothetical protein compare
CCNA_00555 +0.6 3.3 nitrogen regulatory protein P-II compare
CCNA_03970 +0.6 1.2 hypothetical protein compare
CCNA_01850 +0.6 4.3 quinol cytochrome oxidase polypeptide I compare
CCNA_03517 +0.6 3.6 cytochrome c oxidase polypeptide I coxA compare
CCNA_02649 +0.6 1.6 PaiB transcriptional regulator compare
CCNA_03349 +0.6 1.0 hypothetical protein compare
CCNA_01963 +0.6 2.5 hypothetical protein compare
CCNA_01176 +0.6 0.9 hypothetical protein compare
CCNA_03936 +0.6 2.0 hypothetical protein compare
CCNA_03024 +0.6 3.0 branched-chain amino acid aminotransferase compare
CCNA_00871 +0.6 2.8 carbon-nitrogen hydrolase family protein compare
CCNA_01270 +0.6 1.5 hypothetical protein compare
CCNA_01622 +0.6 1.8 Rsh ppGpp hydrolase-synthetase compare
CCNA_02068 +0.6 2.4 Mth938-like membrane protein compare
CCNA_03689 +0.6 4.4 alanine dehydrogenase compare
CCNA_00527 +0.6 3.3 hypothetical protein compare
CCNA_03893 +0.6 1.4 hypothetical protein compare
CCNA_00712 +0.6 3.1 hypothetical protein compare
CCNA_02760 +0.6 1.0 hypothetical protein compare
CCNA_00368 +0.6 3.0 phosphonates transport system permease protein phnE compare
CCNA_03345 +0.6 1.3 Holliday junction DNA helicase RuvA compare
CCNA_02589 +0.6 1.3 BolA-related transcriptional regulator compare
CCNA_03948 +0.6 0.5 hypothetical protein compare
CCNA_01923 +0.6 3.2 ATP-dependent RNA helicase compare
CCNA_02551 +0.6 2.0 hypothetical protein compare
CCNA_02367 +0.6 3.9 CelR-family transcriptional regulator compare
CCNA_03491 +0.6 2.8 gluconate 5-dehydrogenase (Ga5DH)-related protein compare
CCNA_03268 +0.6 2.2 diguanylate receptor protein DgrB compare
CCNA_03989 +0.6 4.5 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_R0037 +0.6 1.9 tRNA-Glu compare
CCNA_01767 +0.6 1.9 cytochrome C family protein compare
CCNA_00292 +0.6 0.8 phosphate transport system permease protein pstC compare
CCNA_01913 +0.6 3.4 MarR-family transcriptional regulator compare
CCNA_00545 +0.6 2.7 acetoacetyl-CoA reductase compare
CCNA_01249 +0.5 2.1 ABC-transporter substrate binding protein compare
CCNA_02976 +0.5 2.7 MCP-signal associated domain protein compare
CCNA_02617 +0.5 4.4 histidinol-phosphate aminotransferase compare
CCNA_00255 +0.5 0.9 esterase compare
CCNA_01273 +0.5 2.0 EMG2 protein compare
CCNA_00811 +0.5 3.0 TetR-family transcriptional regulator compare
CCNA_03105 +0.5 3.1 DnaJ domain protein compare
CCNA_00931 +0.5 3.7 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase compare
CCNA_00929 +0.5 3.6 Riboflavin-specific deaminase family protein compare
CCNA_03121 +0.5 1.4 hypothetical protein compare
CCNA_02931 +0.5 1.6 flgE-related flagellar hook protein compare
CCNA_01962 +0.5 1.9 leucyl/phenylalanyl-tRNA--protein transferase compare
CCNA_03809 +0.5 2.3 organic solvent resistance transport system permease compare
CCNA_03807 +0.5 3.1 organic solvent resistance transport system Ttg2D protein compare
CCNA_01541 +0.5 3.9 LysR-family transcriptional regulator compare
CCNA_01118 +0.5 0.9 hypothetical protein compare
CCNA_02110 +0.5 1.8 hypothetical protein compare
CCNA_02952 +0.5 0.8 hypothetical protein compare
CCNA_01575 +0.5 3.3 glucose / sorbosone dehydrogenase compare
CCNA_02597 +0.5 2.5 hypothetical protein compare
CCNA_02330 +0.5 1.5 hypothetical protein compare
CCNA_01680 +0.5 2.9 succinylarginine dihydrolase compare
CCNA_02030 +0.5 1.4 hypothetical protein compare
CCNA_03064 +0.5 2.8 PadR-family transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Caulobacter crescentus NA1000 in nitrogen source experiments

For nitrogen source L-Isoleucine across organisms