Experiment set1IT089 for Pantoea sp. MT58

Compare to:

Potassium dichromate 2 uM, anaerobic

200 most detrimental genes:

  gene name fitness t score description  
IAI47_11735 +1.2 3.6 histidinol-phosphatase compare
IAI47_09550 +1.1 5.0 hypothetical protein compare
IAI47_09040 +1.0 0.8 NAD-dependent epimerase compare
IAI47_05870 +0.9 4.6 lysis protein compare
IAI47_06395 +0.9 1.1 NADH-quinone oxidoreductase subunit NuoI compare
IAI47_16420 +0.9 7.4 LacI family DNA-binding transcriptional regulator compare
IAI47_08845 +0.8 2.1 cell division topological specificity factor MinE compare
IAI47_08030 +0.8 5.7 flagellar M-ring protein FliF compare
IAI47_08005 +0.7 4.5 flagellar hook-length control protein FliK compare
IAI47_01135 +0.7 0.9 hypothetical protein compare
IAI47_08465 +0.7 4.8 zinc ABC transporter substrate-binding protein ZnuA compare
IAI47_05865 +0.7 4.5 hypothetical protein compare
IAI47_19850 +0.7 2.7 hypothetical protein compare
IAI47_08345 +0.7 5.4 flagellar type III secretion system protein FlhB compare
IAI47_05390 +0.7 3.9 sulfate/thiosulfate ABC transporter permease CysT compare
IAI47_07450 +0.7 2.9 winged helix-turn-helix domain-containing protein compare
IAI47_08025 +0.7 3.9 flagellar motor switch protein FliG compare
IAI47_06470 +0.7 5.7 two-component system sensor histidine kinase RcsC compare
IAI47_08010 +0.7 3.8 flagella biosynthesis chaperone FliJ compare
IAI47_21500 +0.6 2.2 H-NS histone family protein compare
IAI47_07930 +0.6 1.4 DUF2158 domain-containing protein compare
IAI47_05875 +0.6 4.6 lysozyme compare
IAI47_06415 +0.6 2.7 NADH-quinone oxidoreductase subunit M compare
IAI47_08285 +0.6 4.3 flagellar transcriptional regulator FlhC compare
IAI47_12145 +0.6 3.3 flagellar basal body rod protein FlgF compare
IAI47_12060 +0.6 2.4 beta-ketoacyl-ACP synthase II compare
IAI47_03865 +0.6 2.2 PTS lactose/cellobiose transporter subunit IIA compare
IAI47_12555 +0.6 3.0 hypothetical protein compare
IAI47_08280 +0.6 4.1 flagellar transcriptional regulator FlhD compare
IAI47_05745 +0.6 1.1 protease FtsH-inhibitory lysogeny factor CIII compare
IAI47_17975 +0.6 2.4 YjbF family lipoprotein compare
IAI47_07700 +0.6 2.3 EAL domain-containing protein compare
IAI47_06455 +0.6 2.9 ribonucleoside-diphosphate reductase subunit alpha compare
IAI47_12140 +0.6 3.5 flagellar basal-body rod protein FlgG compare
IAI47_05400 +0.6 3.7 sulfate/thiosulfate ABC transporter ATP-binding protein CysA compare
IAI47_08015 +0.6 3.9 flagellum-specific ATP synthase FliI compare
IAI47_09260 +0.6 2.7 phosphatidylglycerophosphatase B compare
IAI47_12155 +0.6 4.1 flagellar hook assembly protein FlgD compare
IAI47_08350 +0.5 3.9 flagellar biosynthesis protein FlhA compare
IAI47_16405 +0.5 1.8 siderophore-iron reductase FhuF compare
IAI47_05860 +0.5 3.2 YlcG family protein compare
IAI47_12150 +0.5 4.4 flagellar hook protein FlgE compare
IAI47_12160 +0.5 3.3 flagellar basal body rod protein FlgC compare
IAI47_00670 +0.5 4.9 sugar glycosyltransferase compare
IAI47_02385 +0.5 4.1 tRNA dihydrouridine synthase DusB compare
IAI47_13885 +0.5 1.2 N-acetylglucosamine-6-phosphate deacetylase compare
IAI47_05395 +0.5 4.1 sulfate/thiosulfate ABC transporter permease CysW compare
IAI47_02895 +0.5 4.2 DedA family protein compare
IAI47_05385 +0.5 4.5 sulfate ABC transporter substrate-binding protein compare
IAI47_07625 +0.5 2.0 GNAT family N-acetyltransferase compare
IAI47_21640 +0.5 2.0 sigma-70 family RNA polymerase sigma factor compare
IAI47_12125 +0.5 3.6 flagellar assembly peptidoglycan hydrolase FlgJ compare
IAI47_08160 +0.5 3.1 RNA polymerase sigma factor FliA compare
IAI47_00935 +0.5 1.9 Si-specific NAD(P)(+) transhydrogenase compare
IAI47_14910 +0.5 2.7 recombination-associated protein RdgC compare
IAI47_07985 +0.5 2.6 flagellar biosynthetic protein FliO compare
IAI47_04705 +0.5 0.8 hypothetical protein compare
IAI47_06965 +0.4 0.6 glycosyltransferase family 2 protein compare
IAI47_21600 +0.4 1.0 EamA family transporter compare
IAI47_12330 +0.4 1.9 DUF3261 domain-containing protein compare
IAI47_10930 +0.4 2.1 C40 family peptidase compare
IAI47_07000 +0.4 3.5 UDP-glucose 4-epimerase GalE compare
IAI47_21630 +0.4 2.8 YceI family protein compare
IAI47_03670 +0.4 2.0 DUF937 domain-containing protein compare
IAI47_03640 +0.4 3.9 glycosyltransferase compare
IAI47_06450 +0.4 1.9 ribonucleotide-diphosphate reductase subunit beta compare
IAI47_07470 +0.4 1.4 AlpA family transcriptional regulator compare
IAI47_21250 +0.4 1.9 helix-turn-helix domain-containing protein compare
IAI47_05955 +0.4 2.1 hypothetical protein compare
IAI47_08470 +0.4 3.6 murein DD-endopeptidase MepM compare
IAI47_12135 +0.4 3.6 flagellar basal body L-ring protein FlgH compare
IAI47_14700 +0.4 2.5 protoheme IX farnesyltransferase compare
IAI47_10500 +0.4 3.2 dipeptide/tripeptide permease DtpA compare
IAI47_19785 +0.4 1.8 DUF1232 domain-containing protein compare
IAI47_19825 +0.4 2.5 EAL domain-containing protein compare
IAI47_07550 +0.4 0.7 tRNA-Asn compare
IAI47_03645 +0.4 3.9 O-antigen ligase family protein compare
IAI47_08000 +0.4 2.7 flagellar basal body-associated protein FliL compare
IAI47_12165 +0.4 2.6 flagellar basal body rod protein FlgB compare
IAI47_05790 +0.4 1.2 hypothetical protein compare
IAI47_05820 +0.4 2.9 DUF3850 domain-containing protein compare
IAI47_14545 +0.4 1.9 hypothetical protein compare
IAI47_07975 +0.4 2.0 flagellar biosynthesis protein FliQ compare
IAI47_19710 +0.4 1.6 helix-turn-helix transcriptional regulator compare
IAI47_14695 +0.4 1.4 cytochrome o ubiquinol oxidase subunit IV compare
IAI47_06390 +0.4 0.9 NADH-quinone oxidoreductase subunit NuoH compare
IAI47_12435 +0.4 0.9 hypothetical protein compare
IAI47_12980 +0.4 1.7 N-acetylmuramoyl-L-alanine amidase compare
IAI47_14480 +0.4 2.5 adenine phosphoribosyltransferase compare
IAI47_09490 +0.4 1.6 DUF333 domain-containing protein compare
IAI47_16410 +0.4 1.8 YbaK/EbsC family protein compare
IAI47_17080 +0.4 2.1 transcription elongation factor GreA compare
IAI47_21715 +0.4 2.4 HAMP domain-containing protein compare
IAI47_14525 +0.4 1.8 50S ribosomal protein L36 compare
IAI47_20300 +0.4 2.1 hydrolase compare
IAI47_12130 +0.4 3.2 flagellar basal body P-ring protein FlgI compare
IAI47_07710 +0.4 2.0 BCCT family transporter compare
IAI47_16415 +0.4 3.0 nucleoside hydrolase compare
IAI47_17710 +0.4 2.9 glutamate/aspartate:proton symporter GltP compare
IAI47_07300 +0.4 1.3 hypothetical protein compare
IAI47_07995 +0.4 2.9 flagellar motor switch protein FliM compare
IAI47_05975 +0.4 2.2 NTP pyrophosphohydrolase compare
IAI47_14955 +0.4 1.4 phosphate starvation-inducible protein compare
IAI47_14190 +0.4 1.4 DUF2171 domain-containing protein compare
IAI47_05665 +0.4 1.2 hypothetical protein compare
IAI47_02835 +0.4 2.5 DnaA initiator-associating protein DiaA compare
IAI47_04570 +0.4 2.4 hypothetical protein compare
IAI47_19575 +0.4 1.8 hypothetical protein compare
IAI47_15005 +0.4 0.8 hypothetical protein compare
IAI47_21000 +0.4 2.5 hypothetical protein compare
IAI47_16670 +0.4 1.4 stress protein compare
IAI47_05780 +0.4 2.5 hypothetical protein compare
IAI47_19880 +0.4 2.4 LysR family transcriptional regulator compare
IAI47_17875 +0.4 2.7 zinc uptake transcriptional repressor Zur compare
IAI47_08020 +0.4 2.5 flagellar assembly protein FliH compare
IAI47_21695 +0.4 1.9 beta-ketoacyl-ACP synthase II compare
IAI47_19040 +0.4 1.7 hypothetical protein compare
IAI47_08455 +0.4 1.9 zinc ABC transporter permease subunit ZnuB compare
IAI47_00675 +0.4 3.3 glycosyltransferase family 9 protein compare
IAI47_19195 +0.4 2.3 acetyltransferase compare
IAI47_06910 +0.4 1.7 dCTP deaminase compare
IAI47_01120 +0.4 2.4 manganese efflux pump MntP compare
IAI47_20975 +0.4 2.2 cupin compare
IAI47_11700 +0.3 2.1 SH3 domain-containing protein compare
IAI47_07800 +0.3 1.6 phosphonate ABC transporter ATP-binding protein compare
IAI47_04095 +0.3 1.7 2-dehydro-3-deoxyglucarate aldolase compare
IAI47_11950 +0.3 2.0 NAD-dependent protein deacylase compare
IAI47_21765 +0.3 0.7 YoeB-YefM toxin-antitoxin system antitoxin YefM compare
IAI47_12955 +0.3 1.4 cold shock-like protein CspD compare
IAI47_14750 +0.3 2.0 phosphatidylglycerophosphatase A compare
IAI47_20540 +0.3 1.5 TetR/AcrR family transcriptional regulator compare
IAI47_08460 +0.3 2.0 zinc ABC transporter ATP-binding protein ZnuC compare
IAI47_08740 +0.3 1.4 DUF2627 domain-containing protein compare
IAI47_04735 +0.3 1.5 DUF5375 family protein compare
IAI47_20230 +0.3 1.8 peroxiredoxin compare
IAI47_21495 +0.3 1.8 hypothetical protein compare
IAI47_04775 +0.3 0.9 SIR2 family protein compare
IAI47_00370 +0.3 2.8 ribokinase compare
IAI47_01125 +0.3 1.2 stress response protein AzuC compare
IAI47_08840 +0.3 1.8 ribonuclease D compare
IAI47_07380 +0.3 1.3 ABC transporter ATP-binding protein compare
IAI47_21730 +0.3 1.1 hypothetical protein compare
IAI47_20290 +0.3 1.7 XapX domain-containing protein compare
IAI47_14325 +0.3 0.9 ribosome-associated protein YbcJ compare
IAI47_07005 +0.3 1.7 glycosyltransferase family 4 protein compare
IAI47_16135 +0.3 1.3 FKBP-type peptidyl-prolyl cis-trans isomerase compare
IAI47_17405 +0.3 1.7 PAAR domain-containing protein compare
IAI47_12740 +0.3 1.2 aliphatic sulfonates ABC transporter ATP-binding protein compare
IAI47_10280 +0.3 2.5 virulence factor SrfB compare
IAI47_20295 +0.3 1.8 DUF1427 family protein compare
IAI47_19490 +0.3 1.5 DUF4102 domain-containing protein compare
IAI47_07765 +0.3 1.8 carbon-phosphorus lyase complex subunit PhnI compare
IAI47_10315 +0.3 2.1 type II toxin-antitoxin system HicB family antitoxin compare
IAI47_14690 +0.3 1.6 cytochrome o ubiquinol oxidase subunit III compare
IAI47_09955 +0.3 1.2 SDR family oxidoreductase compare
IAI47_01825 +0.3 2.0 two-component system sensor histidine kinase EnvZ compare
IAI47_10565 +0.3 1.1 DUF4113 domain-containing protein compare
IAI47_10750 +0.3 1.6 aldo/keto reductase family oxidoreductase compare
IAI47_14470 +0.3 0.9 YbaB/EbfC family nucleoid-associated protein compare
IAI47_04275 +0.3 2.4 lytic murein transglycosylase B compare
IAI47_05125 +0.3 0.8 hypothetical protein compare
IAI47_19105 +0.3 1.8 hypothetical protein compare
IAI47_19465 +0.3 1.7 VOC family protein compare
IAI47_04800 +0.3 0.5 RnfH family protein compare
IAI47_11845 +0.3 1.1 hypothetical protein compare
IAI47_06445 +0.3 0.8 2Fe-2S ferredoxin-like protein compare
IAI47_06480 +0.3 2.2 phosphotransferase RcsD compare
IAI47_09285 +0.3 1.2 osmotically-inducible lipoprotein OsmB compare
IAI47_21645 +0.3 1.7 tetratricopeptide repeat protein compare
IAI47_19515 +0.3 2.2 hypothetical protein compare
IAI47_07780 +0.3 1.5 phosphonate C-P lyase system protein PhnL compare
IAI47_03555 +0.3 1.8 oxidative damage protection protein compare
IAI47_20845 +0.3 1.9 SDR family oxidoreductase compare
IAI47_20115 +0.3 1.6 DUF1090 domain-containing protein compare
IAI47_11605 +0.3 1.2 hypothetical protein compare
IAI47_12775 +0.3 2.1 YcbK family protein compare
IAI47_03740 +0.3 1.9 cell division protein ZapA compare
IAI47_07980 +0.3 1.7 flagellar type III secretion system pore protein FliP compare
IAI47_03570 +0.3 0.9 YggL family protein compare
IAI47_20960 +0.3 1.4 LysR family transcriptional regulator compare
IAI47_08145 +0.3 2.5 flagellin FliC compare
IAI47_06840 +0.3 1.9 lipid kinase YegS compare
IAI47_06625 +0.3 2.0 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
IAI47_04630 +0.3 1.6 allose kinase compare
IAI47_05940 +0.3 2.1 DUF4054 domain-containing protein compare
IAI47_20225 +0.3 2.3 aldose 1-epimerase family protein compare
IAI47_13845 +0.3 1.9 esterase compare
IAI47_20015 +0.3 1.9 MsnO8 family LLM class oxidoreductase compare
IAI47_01750 +0.3 1.4 glycerol-3-phosphate dehydrogenase compare
IAI47_04170 +0.3 2.0 aminopeptidase compare
IAI47_21515 +0.3 1.4 porin compare
IAI47_17510 +0.3 1.6 DUF1330 domain-containing protein compare
IAI47_05945 +0.3 1.7 hypothetical protein compare
IAI47_06365 +0.3 1.0 NADH-quinone oxidoreductase subunit B compare
IAI47_12170 +0.3 2.0 flagellar basal body P-ring formation protein FlgA compare
IAI47_05595 +0.3 1.9 IclR family transcriptional regulator compare
IAI47_21530 +0.3 1.1 FeoA domain-containing protein compare
IAI47_19935 +0.3 1.1 hypothetical protein compare
IAI47_18905 +0.3 1.5 pyridoxamine 5'-phosphate oxidase family protein compare
IAI47_06900 +0.3 0.8 phosphatase PAP2 family protein compare


Specific Phenotypes

None in this experiment

For Pantoea sp. MT58 in stress experiments

For stress Potassium dichromate across organisms