Experiment set1IT088 for Dyella japonica UNC79MFTsu3.2

Compare to:

D-Glucose carbon source

200 most important genes:

  gene name fitness t score description  
ABZR86_RS12070 -7.4 -7.2 anthranilate phosphoribosyltransferase compare
ABZR86_RS15945 -6.1 -6.0 dihydroxy-acid dehydratase compare
ABZR86_RS10475 -6.0 -7.7 shikimate kinase compare
ABZR86_RS17085 -5.9 -9.9 type II 3-dehydroquinate dehydratase compare
ABZR86_RS14985 -5.8 -11.1 shikimate dehydrogenase compare
ABZR86_RS15980 -5.7 -5.6 homoserine kinase (EC 2.7.1.39) (from data) compare
ABZR86_RS19025 -5.7 -3.9 homoserine O-succinyltransferase compare
ABZR86_RS09635 -5.7 -6.7 phosphoglycerate dehydrogenase compare
ABZR86_RS08695 -5.7 -9.5 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
ABZR86_RS15935 -5.6 -13.6 biosynthetic-type acetolactate synthase large subunit compare
ABZR86_RS08700 -5.5 -3.8 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
ABZR86_RS15950 -5.4 -8.3 3-isopropylmalate dehydrogenase compare
ABZR86_RS16800 -5.4 -15.9 FAD-dependent oxidoreductase compare
ABZR86_RS08730 -5.3 -12.9 N-acetylornithine carbamoyltransferase compare
ABZR86_RS06720 -5.3 -6.3 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
ABZR86_RS15960 -5.3 -11.3 3-isopropylmalate dehydratase large subunit compare
ABZR86_RS14690 -5.2 -7.1 phosphogluconate dehydratase compare
ABZR86_RS12065 -5.2 -7.0 indole-3-glycerol phosphate synthase TrpC compare
ABZR86_RS14100 -5.1 -7.8 DNA adenine methylase compare
ABZR86_RS13515 -5.1 -5.0 2,3-diphosphoglycerate-dependent phosphoglycerate mutase compare
ABZR86_RS12180 -5.1 -17.3 anthranilate synthase component I compare
ABZR86_RS10715 -5.1 -15.4 serine hydroxymethyltransferase compare
ABZR86_RS16795 -5.1 -21.1 glutamate synthase large subunit compare
ABZR86_RS10425 -5.1 -4.9 pyrroline-5-carboxylate reductase compare
ABZR86_RS15940 -5.1 -11.3 ketol-acid reductoisomerase compare
ABZR86_RS06715 -5.0 -8.4 imidazole glycerol phosphate synthase subunit HisH compare
ABZR86_RS02225 -5.0 -8.3 prephenate dehydratase compare
ABZR86_RS07995 -4.9 -6.7 tryptophan synthase subunit alpha compare
ABZR86_RS08705 -4.9 -11.7 N-acetylglutamate synthase; N-acetylglutamate kinase (EC 2.3.1.1; EC 2.7.2.8) (from data) compare
ABZR86_RS13055 -4.9 -11.7 glucokinase compare
ABZR86_RS02815 -4.8 -18.1 asparagine synthase B compare
ABZR86_RS08710 -4.8 -10.7 N-acetylcitrulline deacetylase (EC 3.5.1.-) (from data) compare
ABZR86_RS08000 -4.8 -15.4 tryptophan synthase subunit beta compare
ABZR86_RS02220 -4.8 -18.3 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABZR86_RS19560 -4.8 -6.4 aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) (from data) compare
ABZR86_RS08010 -4.8 -7.9 phosphoribosylanthranilate isomerase compare
ABZR86_RS11555 -4.8 -14.0 phosphoenolpyruvate carboxylase compare
ABZR86_RS08340 -4.8 -6.5 adenylosuccinate synthase compare
ABZR86_RS08250 -4.7 -3.2 phosphate signaling complex protein PhoU compare
ABZR86_RS08715 -4.7 -15.3 arginosuccinate synthetase (EC 6.3.4.5) (from data) compare
ABZR86_RS15975 -4.7 -13.2 threonine synthase (EC 4.2.3.1) (from data) compare
ABZR86_RS14700 -4.7 -4.5 glucose-6-phosphate dehydrogenase compare
ABZR86_RS10215 -4.6 -9.3 inositol monophosphatase family protein compare
ABZR86_RS05875 -4.6 -7.6 cysteine synthase A compare
ABZR86_RS02230 -4.6 -5.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABZR86_RS15955 -4.6 -9.2 3-isopropylmalate dehydratase small subunit compare
ABZR86_RS06705 -4.5 -5.2 imidazole glycerol phosphate synthase subunit HisF compare
ABZR86_RS05885 -4.4 -10.9 LysR substrate-binding domain-containing protein compare
ABZR86_RS06730 -4.4 -9.7 histidinol dehydrogenase compare
ABZR86_RS11570 -4.4 -10.3 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABZR86_RS08040 -4.3 -7.2 chorismate synthase compare
ABZR86_RS06710 -4.3 -8.2 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABZR86_RS06000 -4.2 -7.5 poly(R)-hydroxyalkanoic acid synthase subunit PhaE compare
ABZR86_RS15970 -4.2 -8.1 2-isopropylmalate synthase compare
ABZR86_RS06725 -4.2 -9.0 histidinol-phosphate transaminase compare
ABZR86_RS19860 -4.2 -11.8 phosphoribosylglycinamide formyltransferase compare
ABZR86_RS18675 -4.1 -6.2 phosphoglycerate kinase compare
ABZR86_RS05995 -4.0 -18.6 class III poly(R)-hydroxyalkanoic acid synthase subunit PhaC compare
ABZR86_RS19030 -4.0 -6.9 cystathionine gamma-synthase compare
ABZR86_RS06700 -4.0 -7.6 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
ABZR86_RS06630 -4.0 -4.3 phosphopyruvate hydratase compare
ABZR86_RS15965 -3.9 -8.2 branched-chain amino acid transaminase compare
ABZR86_RS06260 -3.9 -5.9 MBL fold metallo-hydrolase compare
ABZR86_RS19800 -3.9 -10.9 RNase adapter RapZ compare
ABZR86_RS21020 -3.8 -12.9 ATP-binding protein compare
ABZR86_RS06775 -3.8 -15.5 amidophosphoribosyltransferase compare
ABZR86_RS15460 -3.8 -2.6 type I glutamate--ammonia ligase compare
ABZR86_RS05905 -3.8 -8.6 assimilatory sulfite reductase (NADPH) flavoprotein subunit compare
ABZR86_RS18775 -3.7 -2.5 nucleotidyltransferase family protein compare
ABZR86_RS12215 -3.7 -3.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABZR86_RS15315 -3.7 -10.6 phenylalanine 4-monooxygenase compare
ABZR86_RS05900 -3.6 -12.7 assimilatory sulfite reductase (NADPH) hemoprotein subunit compare
ABZR86_RS00830 -3.6 -13.2 glucose-6-phosphate isomerase compare
ABZR86_RS02450 -3.5 -4.1 hypothetical protein compare
ABZR86_RS05890 -3.5 -16.0 bifunctional sulfate adenylyltransferase/adenylylsulfate kinase compare
ABZR86_RS12605 -3.4 -4.0 thioredoxin TrxA compare
ABZR86_RS18615 -3.4 -3.3 type I glyceraldehyde-3-phosphate dehydrogenase compare
ABZR86_RS08680 -3.4 -10.1 glutamate-5-semialdehyde dehydrogenase compare
ABZR86_RS12200 -3.4 -6.7 ribulose-phosphate 3-epimerase compare
ABZR86_RS12780 -3.3 -7.1 pteridine reductase compare
ABZR86_RS09935 -3.3 -2.8 DUF4105 domain-containing protein compare
ABZR86_RS20980 -3.2 -3.0 hypothetical protein compare
ABZR86_RS02885 -3.2 -12.4 sulfate ABC transporter permease subunit CysT compare
ABZR86_RS07585 -3.2 -11.3 homocysteine S-methyltransferase family protein compare
ABZR86_RS08905 -3.2 -11.6 carbonate dehydratase compare
ABZR86_RS06735 -3.2 -6.5 ATP phosphoribosyltransferase compare
ABZR86_RS05895 -3.2 -11.9 phosphoadenylyl-sulfate reductase compare
ABZR86_RS21575 -3.2 -8.9 [protein-PII] uridylyltransferase compare
ABZR86_RS02895 -3.1 -9.6 ABC transporter ATP-binding protein compare
ABZR86_RS02890 -3.1 -7.8 sulfate ABC transporter permease subunit CysW compare
ABZR86_RS07590 -3.1 -16.2 methionine synthase compare
ABZR86_RS02880 -3.0 -11.1 sulfate ABC transporter substrate-binding protein compare
ABZR86_RS11825 -3.0 -2.8 citrate synthase compare
ABZR86_RS10205 -2.9 -7.4 3'(2'),5'-bisphosphate nucleotidase CysQ compare
ABZR86_RS10480 -2.9 -3.1 3-dehydroquinate synthase compare
ABZR86_RS13850 -2.9 -6.8 phosphoribosylamine--glycine ligase compare
ABZR86_RS12435 -2.9 -11.6 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
ABZR86_RS19235 -2.8 -3.7 phosphoribosylformylglycinamidine synthase compare
ABZR86_RS19865 -2.7 -3.6 phosphoribosylformylglycinamidine cyclo-ligase compare
ABZR86_RS10710 -2.7 -2.5 transcriptional regulator NrdR compare
ABZR86_RS08305 -2.7 -15.8 aminomethyl-transferring glycine dehydrogenase compare
ABZR86_RS12790 -2.6 -2.9 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase compare
ABZR86_RS08685 -2.6 -4.8 glutamate 5-kinase compare
ABZR86_RS18655 -2.6 -7.2 transketolase compare
ABZR86_RS16045 -2.5 -8.5 N-acetylglucosamine-6-phosphate deacetylase compare
ABZR86_RS05550 -2.5 -4.0 lipopolysaccharide assembly protein LapB compare
ABZR86_RS18450 -2.5 -2.9 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha compare
ABZR86_RS18780 -2.4 -3.5 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase compare
ABZR86_RS15985 -2.4 -7.6 homoserine dehydrogenase compare
ABZR86_RS10945 -2.4 -9.5 trehalose-phosphatase compare
ABZR86_RS12885 -2.4 -1.6 magnesium-translocating P-type ATPase compare
ABZR86_RS18875 -2.4 -9.3 glycine cleavage system aminomethyltransferase GcvT compare
ABZR86_RS18640 -2.3 -9.5 class I fructose-bisphosphate aldolase compare
ABZR86_RS18355 -2.3 -1.7 PepSY domain-containing protein compare
ABZR86_RS12545 -2.2 -13.5 transaldolase compare
ABZR86_RS06580 -2.2 -4.2 peptidoglycan DD-metalloendopeptidase family protein compare
ABZR86_RS12280 -2.1 -2.1 dihydrolipoyl dehydrogenase compare
ABZR86_RS08150 -2.1 -1.9 DeoR/GlpR family DNA-binding transcription regulator compare
ABZR86_RS18880 -2.0 -6.9 glycine cleavage system protein GcvH compare
ABZR86_RS15515 -2.0 -6.7 nitrogen regulation protein NR(I) compare
ABZR86_RS10530 -2.0 -1.7 H-NS histone family protein compare
ABZR86_RS09145 -1.9 -4.6 hypothetical protein compare
ABZR86_RS05880 -1.9 -7.6 siroheme synthase CysG compare
ABZR86_RS07180 -1.9 -4.5 RNA polymerase sigma factor RpoE compare
ABZR86_RS02305 -1.9 -1.3 hypothetical protein compare
ABZR86_RS06740 -1.9 -2.4 YerC/YecD family TrpR-related protein compare
ABZR86_RS09505 -1.8 -7.2 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU compare
ABZR86_RS06030 -1.8 -1.5 transcription termination factor NusA compare
ABZR86_RS12005 -1.7 -1.4 ribose-5-phosphate isomerase RpiA compare
ABZR86_RS20775 -1.7 -5.0 TetR/AcrR family transcriptional regulator compare
ABZR86_RS08775 -1.7 -3.0 HAD-IA family hydrolase compare
ABZR86_RS17225 -1.7 -1.3 TetR/AcrR family transcriptional regulator compare
ABZR86_RS11485 -1.6 -5.6 hypothetical protein compare
ABZR86_RS09885 -1.6 -1.5 trypsin-like peptidase domain-containing protein compare
ABZR86_RS13380 -1.6 -1.9 Sec-independent protein translocase subunit TatA compare
ABZR86_RS21480 -1.6 -4.9 arginase family protein compare
ABZR86_RS18830 -1.6 -6.2 electron transfer flavoprotein-ubiquinone oxidoreductase compare
ABZR86_RS15020 -1.6 -2.1 DUF484 family protein compare
ABZR86_RS10830 -1.6 -1.9 Holliday junction branch migration DNA helicase RuvB compare
ABZR86_RS07660 -1.6 -4.3 exodeoxyribonuclease V subunit gamma compare
ABZR86_RS06690 -1.5 -3.1 acireductone synthase compare
ABZR86_RS00570 -1.5 -4.6 acetoacetyl-CoA reductase compare
ABZR86_RS05860 -1.5 -2.5 adenylosuccinate lyase compare
ABZR86_RS09075 -1.5 -1.5 NrsF family protein compare
ABZR86_RS13370 -1.5 -7.6 twin-arginine translocase subunit TatC compare
ABZR86_RS22190 -1.4 -1.5 hypothetical protein compare
ABZR86_RS19910 -1.4 -1.6 inorganic phosphate transporter compare
ABZR86_RS07665 -1.4 -3.5 exodeoxyribonuclease V subunit beta compare
ABZR86_RS18960 -1.4 -5.1 TetR/AcrR family transcriptional regulator compare
ABZR86_RS15695 -1.4 -1.4 23S ribosomal RNA compare
ABZR86_RS11845 -1.3 -8.0 RidA family protein compare
ABZR86_RS02545 -1.3 -2.4 Ref family recombination enhancement nuclease compare
ABZR86_RS06590 -1.3 -2.5 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
ABZR86_RS20150 -1.3 -1.0 PilZ domain-containing protein compare
ABZR86_RS21435 -1.3 -4.6 DegT/DnrJ/EryC1/StrS family aminotransferase compare
ABZR86_RS08455 -1.3 -5.0 C39 family peptidase compare
ABZR86_RS17180 -1.3 -7.1 glycosyltransferase compare
ABZR86_RS18815 -1.3 -2.8 FAD-binding protein compare
ABZR86_RS15330 -1.2 -7.1 TetR/AcrR family transcriptional regulator compare
ABZR86_RS00685 -1.2 -1.8 carbon storage regulator CsrA compare
ABZR86_RS08460 -1.2 -2.7 hypothetical protein compare
ABZR86_RS09845 -1.2 -8.8 DUF1631 domain-containing protein compare
ABZR86_RS17150 -1.2 -7.6 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase compare
ABZR86_RS08015 -1.2 -0.9 tRNA pseudouridine(38-40) synthase TruA compare
ABZR86_RS08135 -1.2 -1.4 hypothetical protein compare
ABZR86_RS02215 -1.2 -2.5 FHA domain-containing protein compare
ABZR86_RS12835 -1.2 -4.4 DedA family protein compare
ABZR86_RS11880 -1.2 -4.1 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
ABZR86_RS13225 -1.2 -2.8 HAD family hydrolase compare
ABZR86_RS06355 -1.1 -2.7 folate-binding protein YgfZ compare
ABZR86_RS10840 -1.1 -2.5 Holliday junction branch migration protein RuvA compare
ABZR86_RS21725 -1.1 -7.6 YhdP family protein compare
ABZR86_RS19795 -1.1 -4.8 PTS sugar transporter subunit IIA compare
ABZR86_RS05700 -1.1 -2.6 SsrA-binding protein SmpB compare
ABZR86_RS06940 -1.0 -5.6 hypothetical protein compare
ABZR86_RS20435 -1.0 -1.9 hypothetical protein compare
ABZR86_RS13865 -1.0 -0.9 DNA topoisomerase I compare
ABZR86_RS07885 -1.0 -5.0 cation diffusion facilitator family transporter compare
ABZR86_RS11995 -1.0 -4.2 5-formyltetrahydrofolate cyclo-ligase compare
ABZR86_RS05820 -1.0 -3.3 GntR family transcriptional regulator compare
ABZR86_RS09015 -1.0 -3.4 anti-sigma factor compare
ABZR86_RS16345 -1.0 -6.9 NADP-dependent isocitrate dehydrogenase compare
ABZR86_RS10155 -1.0 -1.1 HAMP domain-containing sensor histidine kinase compare
ABZR86_RS13880 -1.0 -1.4 peptide deformylase compare
ABZR86_RS14580 -0.9 -1.8 DUF3224 domain-containing protein compare
ABZR86_RS07245 -0.9 -6.3 pyruvate, water dikinase regulatory protein compare
ABZR86_RS11600 -0.9 -4.3 glycosyltransferase compare
ABZR86_RS15705 -0.9 -6.1 rhomboid family intramembrane serine protease compare
ABZR86_RS19585 -0.9 -1.3 GNAT family N-acetyltransferase compare
ABZR86_RS19725 -0.9 -7.3 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABZR86_RS19905 -0.9 -2.6 DUF47 domain-containing protein compare
ABZR86_RS02185 -0.9 -5.1 tRNA 2-thiouridine(34) synthase MnmA compare
ABZR86_RS18365 -0.9 -7.2 ATP-binding protein compare
ABZR86_RS15640 -0.9 -1.0 orotate phosphoribosyltransferase compare
ABZR86_RS15925 -0.9 -5.7 threonine ammonia-lyase, biosynthetic compare
ABZR86_RS03425 -0.9 -1.4 hypothetical protein compare
ABZR86_RS14705 -0.9 -4.5 GntR family transcriptional regulator compare
ABZR86_RS04920 -0.9 -1.0 pentapeptide repeat-containing protein compare
ABZR86_RS01945 -0.9 -2.4 preprotein translocase subunit SecG compare
ABZR86_RS21655 -0.9 -1.8 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source D-Glucose in Dyella japonica UNC79MFTsu3.2

For carbon source D-Glucose across organisms