Experiment set1IT086 for Pantoea sp. MT58

Compare to:

Cobalt chloride hexahydrate 10 uM, anaerobic

200 most detrimental genes:

  gene name fitness t score description  
IAI47_01780 +1.2 3.3 Fe-S biogenesis protein NfuA compare
IAI47_18715 +1.0 1.8 YibL family ribosome-associated protein compare
IAI47_15235 +0.9 2.5 hydroxyisourate hydrolase compare
IAI47_12790 +0.9 1.2 chromosome partition protein MukE compare
IAI47_07975 +0.8 4.3 flagellar biosynthesis protein FliQ compare
IAI47_16420 +0.8 6.9 LacI family DNA-binding transcriptional regulator compare
IAI47_14700 +0.8 4.5 protoheme IX farnesyltransferase compare
IAI47_15595 +0.7 1.1 Fe(3+)-hydroxamate ABC transporter permease FhuB compare
IAI47_09550 +0.7 2.5 hypothetical protein compare
IAI47_10555 +0.7 2.4 hypothetical protein compare
IAI47_08670 +0.7 1.4 DUF1272 domain-containing protein compare
IAI47_09675 +0.6 1.5 YoaK family small membrane protein compare
IAI47_21530 +0.6 2.2 FeoA domain-containing protein compare
IAI47_07780 +0.6 2.8 phosphonate C-P lyase system protein PhnL compare
IAI47_08200 +0.6 1.6 hypothetical protein compare
IAI47_17975 +0.6 3.0 YjbF family lipoprotein compare
IAI47_11625 +0.6 1.1 DUF1311 domain-containing protein compare
IAI47_06455 +0.6 2.8 ribonucleoside-diphosphate reductase subunit alpha compare
IAI47_11545 +0.6 2.6 hypothetical protein compare
IAI47_13840 +0.6 1.7 replication initiation negative regulator SeqA compare
IAI47_06655 +0.6 2.0 1-phosphofructokinase compare
IAI47_19050 +0.6 1.3 hypothetical protein compare
IAI47_07470 +0.6 0.9 AlpA family transcriptional regulator compare
IAI47_08000 +0.6 3.5 flagellar basal body-associated protein FliL compare
IAI47_02385 +0.6 4.1 tRNA dihydrouridine synthase DusB compare
IAI47_08030 +0.5 4.2 flagellar M-ring protein FliF compare
IAI47_07490 +0.5 1.2 DNA-binding protein compare
IAI47_09790 +0.5 2.0 DUF1161 domain-containing protein compare
IAI47_21505 +0.5 2.1 DUF2256 domain-containing protein compare
IAI47_10500 +0.5 3.8 dipeptide/tripeptide permease DtpA compare
IAI47_08035 +0.5 1.8 flagellar hook-basal body complex protein FliE compare
IAI47_08345 +0.5 4.1 flagellar type III secretion system protein FlhB compare
IAI47_00935 +0.5 2.0 Si-specific NAD(P)(+) transhydrogenase compare
IAI47_01625 +0.5 1.4 GNAT family N-acetyltransferase compare
IAI47_17285 +0.5 1.1 entericidin A/B family lipoprotein compare
IAI47_08020 +0.5 2.6 flagellar assembly protein FliH compare
IAI47_10545 +0.5 1.2 hypothetical protein compare
IAI47_08015 +0.5 3.1 flagellum-specific ATP synthase FliI compare
IAI47_12135 +0.5 3.9 flagellar basal body L-ring protein FlgH compare
IAI47_21535 +0.5 3.9 Fe(2+) transporter permease subunit FeoB compare
IAI47_12170 +0.5 3.0 flagellar basal body P-ring formation protein FlgA compare
IAI47_07985 +0.5 2.4 flagellar biosynthetic protein FliO compare
IAI47_12665 +0.5 1.6 ribosome modulation factor compare
IAI47_08280 +0.5 3.3 flagellar transcriptional regulator FlhD compare
IAI47_05710 +0.5 1.6 hypothetical protein compare
IAI47_21780 +0.5 1.8 hypothetical protein compare
IAI47_05630 +0.5 1.4 hypothetical protein compare
IAI47_12995 +0.5 2.7 arginine ABC transporter ATP-binding protein ArtP compare
IAI47_17900 +0.5 0.7 glycerol-3-phosphate 1-O-acyltransferase PlsB compare
IAI47_13850 +0.5 1.4 LexA regulated protein compare
IAI47_07885 +0.4 0.9 tRNA-Asn compare
IAI47_08435 +0.4 1.1 YebC/PmpR family DNA-binding transcriptional regulator compare
IAI47_08350 +0.4 3.1 flagellar biosynthesis protein FlhA compare
IAI47_06450 +0.4 2.2 ribonucleotide-diphosphate reductase subunit beta compare
IAI47_15880 +0.4 1.3 DNA gyrase inhibitor YacG compare
IAI47_05015 +0.4 2.6 enhanced serine sensitivity protein SseB compare
IAI47_07995 +0.4 3.5 flagellar motor switch protein FliM compare
IAI47_12980 +0.4 2.0 N-acetylmuramoyl-L-alanine amidase compare
IAI47_06410 +0.4 2.1 NADH-quinone oxidoreductase subunit L compare
IAI47_01875 +0.4 1.2 hypothetical protein compare
IAI47_08160 +0.4 3.1 RNA polymerase sigma factor FliA compare
IAI47_08730 +0.4 1.1 YebO family protein compare
IAI47_08740 +0.4 1.5 DUF2627 domain-containing protein compare
IAI47_17080 +0.4 2.1 transcription elongation factor GreA compare
IAI47_08540 +0.4 2.3 YebY family protein compare
IAI47_03890 +0.4 2.7 GNAT family N-acetyltransferase compare
IAI47_18240 +0.4 1.3 NAD(P)H-flavin reductase compare
IAI47_02770 +0.4 1.7 cytochrome b562 compare
IAI47_07755 +0.4 2.0 phosphonate C-P lyase system protein PhnG compare
IAI47_01740 +0.4 1.2 triphosphoribosyl-dephospho-CoA synthase compare
IAI47_06780 +0.4 2.3 iron-sulfur cluster carrier protein ApbC compare
IAI47_04075 +0.4 2.7 galactarate dehydratase compare
IAI47_08285 +0.4 2.8 flagellar transcriptional regulator FlhC compare
IAI47_06470 +0.4 3.3 two-component system sensor histidine kinase RcsC compare
IAI47_12140 +0.4 2.4 flagellar basal-body rod protein FlgG compare
IAI47_12150 +0.4 3.3 flagellar hook protein FlgE compare
IAI47_12300 +0.4 1.1 hypothetical protein compare
IAI47_18985 +0.4 1.4 MarR family transcriptional regulator compare
IAI47_12125 +0.4 3.1 flagellar assembly peptidoglycan hydrolase FlgJ compare
IAI47_14930 +0.4 1.2 shikimate kinase AroL compare
IAI47_14680 +0.4 1.9 cytochrome o ubiquinol oxidase subunit II compare
IAI47_21355 +0.4 1.1 DUF3606 domain-containing protein compare
IAI47_12145 +0.4 2.1 flagellar basal body rod protein FlgF compare
IAI47_06365 +0.4 1.3 NADH-quinone oxidoreductase subunit B compare
IAI47_10230 +0.4 2.3 dipeptidase compare
IAI47_15415 +0.4 1.6 aminoacyl-tRNA hydrolase compare
IAI47_01135 +0.4 0.4 hypothetical protein compare
IAI47_15090 +0.4 2.0 hypothetical protein compare
IAI47_08090 +0.4 1.7 hypothetical protein compare
IAI47_21720 +0.4 1.4 efflux RND transporter periplasmic adaptor subunit compare
IAI47_19295 +0.4 0.9 hypothetical protein compare
IAI47_08025 +0.4 2.2 flagellar motor switch protein FliG compare
IAI47_16595 +0.4 1.4 DUF4102 domain-containing protein compare
IAI47_16415 +0.4 2.8 nucleoside hydrolase compare
IAI47_14815 +0.4 1.7 DUF479 domain-containing protein compare
IAI47_06390 +0.4 1.1 NADH-quinone oxidoreductase subunit NuoH compare
IAI47_21700 +0.4 1.4 family 1 glycosylhydrolase compare
IAI47_07980 +0.4 2.5 flagellar type III secretion system pore protein FliP compare
IAI47_11580 +0.4 2.3 type VI secretion system ATPase TssH compare
IAI47_10835 +0.4 0.5 tRNA-Val compare
IAI47_19930 +0.4 1.7 adhesin compare
IAI47_05790 +0.4 1.0 hypothetical protein compare
IAI47_12165 +0.4 2.4 flagellar basal body rod protein FlgB compare
IAI47_02035 +0.4 1.3 YheV family putative metal-binding protein compare
IAI47_02895 +0.4 2.9 DedA family protein compare
IAI47_03290 +0.4 2.3 hypothetical protein compare
IAI47_20630 +0.4 2.1 DUF2534 family protein compare
IAI47_08470 +0.4 2.8 murein DD-endopeptidase MepM compare
IAI47_20290 +0.4 1.5 XapX domain-containing protein compare
IAI47_12130 +0.4 2.8 flagellar basal body P-ring protein FlgI compare
IAI47_03730 +0.4 2.2 5-formyltetrahydrofolate cyclo-ligase compare
IAI47_11550 +0.4 0.8 hypothetical protein compare
IAI47_04855 +0.3 1.2 anti-sigma-E factor RseA compare
IAI47_19935 +0.3 1.7 hypothetical protein compare
IAI47_20310 +0.3 1.9 DoxX family protein compare
IAI47_21790 +0.3 1.0 helix-turn-helix domain-containing protein compare
IAI47_08815 +0.3 1.3 hypothetical protein compare
IAI47_07205 +0.3 2.2 efflux RND transporter periplasmic adaptor subunit compare
IAI47_07010 +0.3 0.8 ABC transporter permease compare
IAI47_21270 +0.3 1.9 ABC transporter permease subunit compare
IAI47_08010 +0.3 2.1 flagella biosynthesis chaperone FliJ compare
IAI47_12155 +0.3 2.6 flagellar hook assembly protein FlgD compare
IAI47_01950 +0.3 1.9 aminodeoxychorismate/anthranilate synthase component II compare
IAI47_06480 +0.3 2.5 phosphotransferase RcsD compare
IAI47_14990 +0.3 1.7 hypothetical protein compare
IAI47_10845 +0.3 0.8 major outer membrane lipoprotein compare
IAI47_06925 +0.3 2.0 undecaprenyl-phosphate galactose phosphotransferase WbaP compare
IAI47_16940 +0.3 1.6 type 1 glutamine amidotransferase compare
IAI47_14145 +0.3 1.5 hypothetical protein compare
IAI47_12615 +0.3 1.7 methylglyoxal synthase compare
IAI47_13300 +0.3 1.1 GNAT family N-acetyltransferase compare
IAI47_20265 +0.3 1.2 DUF1641 domain-containing protein compare
IAI47_02775 +0.3 1.1 glycine dehydrogenase compare
IAI47_11375 +0.3 0.8 hypothetical protein compare
IAI47_17215 +0.3 0.2 aerobic respiration two-component sensor histidine kinase ArcB compare
IAI47_10795 +0.3 1.4 HTH-type transcriptional repressor PurR compare
IAI47_20035 +0.3 1.8 GNAT family N-acetyltransferase compare
IAI47_05765 +0.3 1.0 hypothetical protein compare
IAI47_00370 +0.3 2.6 ribokinase compare
IAI47_05825 +0.3 1.7 hypothetical protein compare
IAI47_20640 +0.3 1.1 hypothetical protein compare
IAI47_20775 +0.3 1.9 hydroxyacid dehydrogenase compare
IAI47_00290 +0.3 1.2 F0F1 ATP synthase subunit I compare
IAI47_20660 +0.3 1.9 lycopene beta-cyclase CrtY compare
IAI47_07250 +0.3 1.2 tRNA-Asn compare
IAI47_04070 +0.3 1.3 flavodoxin compare
IAI47_17915 +0.3 1.6 phosphate-starvation-inducible protein PsiE compare
IAI47_02350 +0.3 0.4 tRNA-Thr compare
IAI47_09840 +0.3 1.7 glycosyltransferase family 4 protein compare
IAI47_08005 +0.3 1.9 flagellar hook-length control protein FliK compare
IAI47_19015 +0.3 2.1 LysR family transcriptional regulator compare
IAI47_17385 +0.3 1.0 CDP-alcohol phosphatidyltransferase family protein compare
IAI47_01940 +0.3 1.0 DUF2559 family protein compare
IAI47_21865 +0.3 2.3 carbohydrate porin compare
IAI47_20945 +0.3 1.2 hypothetical protein compare
IAI47_10300 +0.3 1.7 helix-turn-helix domain-containing protein compare
IAI47_19035 +0.3 0.5 transcriptional regulator compare
IAI47_14910 +0.3 1.7 recombination-associated protein RdgC compare
IAI47_12180 +0.3 1.2 flagellar export chaperone FlgN compare
IAI47_17250 +0.3 2.3 cell division protein ZapE compare
IAI47_07515 +0.3 1.3 hypothetical protein compare
IAI47_12100 +0.3 1.9 septum formation inhibitor Maf compare
IAI47_11735 +0.3 0.7 histidinol-phosphatase compare
IAI47_07300 +0.3 1.2 hypothetical protein compare
IAI47_18265 +0.3 0.7 Sec-independent protein translocase subunit TatB compare
IAI47_17760 +0.3 1.3 glutathione S-transferase compare
IAI47_12160 +0.3 2.0 flagellar basal body rod protein FlgC compare
IAI47_10430 +0.3 1.0 hypothetical protein compare
IAI47_02495 +0.3 1.1 hypothetical protein compare
IAI47_04950 +0.3 1.8 nitrogen regulatory protein P-II compare
IAI47_20055 +0.3 1.5 non-canonical purine NTP pyrophosphatase compare
IAI47_14490 +0.3 1.2 primosomal replication protein compare
IAI47_03665 +0.3 1.5 agmatinase compare
IAI47_20455 +0.3 2.1 sugar porter family MFS transporter compare
IAI47_02890 +0.3 1.6 EnvZ/OmpR regulon moderator MzrA compare
IAI47_13465 +0.3 1.8 DUF1615 domain-containing protein compare
IAI47_21635 +0.3 1.4 hypothetical protein compare
IAI47_21600 +0.3 0.6 EamA family transporter compare
IAI47_13075 +0.3 1.8 hypothetical protein compare
IAI47_12985 +0.3 1.0 heavy metal-binding domain-containing protein compare
IAI47_14295 +0.3 0.8 hypothetical protein compare
IAI47_07970 +0.3 1.8 flagellar type III secretion system protein FliR compare
IAI47_21860 +0.3 1.9 PTS sucrose transporter subunit IIBC compare
IAI47_05140 +0.3 1.2 DUF2633 family protein compare
IAI47_21670 +0.3 1.1 LuxR family transcriptional regulator compare
IAI47_06420 +0.3 1.0 NADH-quinone oxidoreductase subunit NuoN compare
IAI47_11510 +0.3 1.0 hypothetical protein compare
IAI47_13195 +0.3 1.6 DNA starvation/stationary phase protection protein Dps compare
IAI47_10285 +0.3 1.7 SrfC compare
IAI47_04865 +0.3 0.6 SoxR-reducing system protein RseC compare
IAI47_06030 +0.3 1.0 hypothetical protein compare
IAI47_02590 +0.3 1.3 RNA chaperone Hfq compare
IAI47_10360 +0.3 1.9 pyridoxal phosphate-dependent aminotransferase compare
IAI47_12115 +0.3 2.0 flagellar hook-associated protein FlgL compare
IAI47_07630 +0.3 1.7 glyoxylate/hydroxypyruvate reductase A compare
IAI47_10270 +0.3 1.2 benzoate/H(+) symporter BenE family transporter compare
IAI47_07965 +0.3 1.2 transcriptional regulator RcsA compare
IAI47_08745 +0.3 0.9 transcription antiterminator/RNA stability regulator CspE compare
IAI47_00940 +0.3 1.6 HTH-type transcriptional repressor FabR compare
IAI47_05865 +0.3 1.6 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Pantoea sp. MT58 in stress experiments

For stress Cobalt chloride hexahydrate across organisms