Experiment set1IT085 for Caulobacter crescentus NA1000

Compare to:

L-aspartic acid nitrogen source

200 most detrimental genes:

  gene name fitness t score description  
CCNA_01848 +2.2 12.5 quinol cytochrome oxidase polypeptide IV compare
CCNA_02000 +2.2 3.1 SSU ribosomal protein S2P compare
CCNA_00684 +2.2 9.3 anti-sigma factor, ChrR-family compare
CCNA_01712 +2.1 12.8 CopY/TcrY family transcriptional repressor compare
CCNA_01840 +2.1 16.6 MerR-family transcriptional regulator compare
CCNA_01851 +2.1 16.1 quinol cytochrome oxidase polypeptide II compare
CCNA_02250 +2.1 4.3 methylcrotonyl-CoA carboxylase biotin-containing subunit compare
CCNA_01850 +1.9 13.9 quinol cytochrome oxidase polypeptide I compare
CCNA_01033 +1.9 9.0 FecR family protein compare
CCNA_01684 +1.9 8.5 phenylalanine-4-hydroxylase compare
CCNA_01790 +1.9 6.4 protein translocase subunit secG compare
CCNA_02732 +1.9 6.8 hypothetical protein compare
CCNA_01801 +1.9 8.6 hypothetical protein compare
CCNA_01804 +1.8 11.0 glutathione peroxidase compare
CCNA_00699 +1.8 7.5 LSU ribosomal protein L28P compare
CCNA_03893 +1.8 3.7 hypothetical protein compare
CCNA_01913 +1.8 10.9 MarR-family transcriptional regulator compare
CCNA_02103 +1.8 7.6 hypothetical protein compare
CCNA_01060 +1.8 6.1 type I protein secretion ATP-binding protein RsaD compare
CCNA_02252 +1.7 5.1 methylcrotonyl-CoA carboxylase carboxyl transferase subunit compare
CCNA_03064 +1.7 9.5 PadR-family transcriptional regulator compare
CCNA_01573 +1.7 9.2 ArsR-family transcriptional regulator compare
CCNA_R0054 +1.7 3.1 tRNA-Gly compare
CCNA_01931 +1.7 9.7 TetR-family transcriptional regulator compare
CCNA_01849 +1.7 8.9 quinol cytochrome oxidase polypeptide III compare
CCNA_01780 +1.7 12.4 exopolyphosphatase compare
CCNA_02646 +1.7 3.0 cell division protein MraZ compare
CCNA_01751 +1.7 8.9 aminodeoxychorismate lyase compare
CCNA_02957 +1.7 5.1 ArsR-family transcriptional regulator compare
CCNA_03325 +1.7 5.8 hypothetical protein compare
CCNA_03951 +1.6 6.7 hypothetical protein compare
CCNA_03609 +1.6 5.5 outer membrane protein compare
CCNA_00895 +1.6 10.3 hypothetical protein compare
CCNA_01739 +1.6 7.6 LSU ribosomal protein L9P compare
CCNA_02026 +1.6 5.3 hypothetical protein compare
CCNA_03123 +1.6 10.4 ArsR-family transcriptional regulator compare
CCNA_01979 +1.6 8.4 LexA repressor compare
CCNA_03012 +1.6 9.1 peroxiredoxin compare
CCNA_01186 +1.6 6.6 hypothetical protein compare
CCNA_01593 +1.6 10.2 Xaa-pro aminopeptidase compare
CCNA_03281 +1.6 13.7 AsnC-family transcriptional regulator compare
CCNA_03280 +1.6 13.5 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_02025 +1.6 3.4 hypothetical protein compare
CCNA_03287 +1.6 11.8 PadR-family transcriptional regulator compare
CCNA_03961 +1.6 6.8 hypothetical protein compare
CCNA_01752 +1.6 8.1 YicC-family protein compare
CCNA_02980 +1.6 10.0 tryptophan 2,3-dioxygenase compare
CCNA_00648 +1.6 11.6 nitrate response regulator NasT compare
CCNA_01681 +1.6 5.3 RimI-like acetyltransferase compare
CCNA_02416 +1.6 8.1 DNA-binding protein HU compare
CCNA_02575 +1.5 4.3 hypothetical protein compare
CCNA_03271 +1.5 9.9 methionine gamma-lyase compare
CCNA_01619 +1.5 8.1 NYN domain protein compare
CCNA_02021 +1.5 6.8 hypothetical protein compare
CCNA_02617 +1.5 10.5 histidinol-phosphate aminotransferase compare
CCNA_01361 +1.5 2.7 PepSY superfamily protein compare
CCNA_02004 +1.5 2.8 SOS-induced inhibitor of cell division SidA compare
CCNA_00846 +1.5 12.7 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_00518 +1.5 8.3 LSU ribosomal protein L25P compare
CCNA_01847 +1.5 9.7 cytochrome c oxidase assembly protein Surf1 compare
CCNA_01826 +1.5 8.5 vitamin B12 receptor compare
CCNA_03129 +1.5 10.0 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_01802 +1.5 2.6 hypothetical protein compare
CCNA_01181 +1.5 6.8 hypothetical protein compare
CCNA_01742 +1.5 5.3 hypothetical protein compare
CCNA_01059 +1.4 12.7 S-layer protein rsaA compare
CCNA_03252 +1.4 11.2 CopY/TcrY-family transcriptional regulator compare
CCNA_01942 +1.4 5.7 Rrf2 family protein compare
CCNA_02591 +1.4 5.7 glutaredoxin compare
CCNA_02616 +1.4 8.6 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_03989 +1.4 10.4 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_02367 +1.4 10.4 CelR-family transcriptional regulator compare
CCNA_03479 +1.4 7.1 MarR-family transcriptional regulator compare
CCNA_01541 +1.4 8.7 LysR-family transcriptional regulator compare
CCNA_00919 +1.4 4.6 hypothetical protein compare
CCNA_01968 +1.4 4.5 pentapeptide repeats containing protein compare
CCNA_01528 +1.4 7.7 flagellin fljK compare
CCNA_01680 +1.4 7.8 succinylarginine dihydrolase compare
CCNA_01505 +1.4 3.0 hypothetical protein compare
CCNA_02447 +1.4 10.0 PspA/IM30 family regulatory protein compare
CCNA_02287 +1.4 7.3 TetR-family transcriptional regulator compare
CCNA_01526 +1.4 4.8 flagellar biosynthesis regulatory protein flaF compare
CCNA_01655 +1.4 6.4 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_02448 +1.4 9.6 hypothetical protein compare
CCNA_01679 +1.4 8.4 succinylglutamic semialdehyde dehydrogenase compare
CCNA_03400 +1.4 2.6 hypothetical protein compare
CCNA_03740 +1.4 7.7 cysteine synthase compare
CCNA_02379 +1.4 7.6 hypothetical protein compare
CCNA_02942 +1.4 3.6 nucleoside-diphosphate-sugar epimerase compare
CCNA_03762 +1.4 3.1 acetolactate synthase-related protein compare
CCNA_02619 +1.4 11.0 stomatin/prohibitin-related protein compare
CCNA_02028 +1.3 1.5 NTF2 superfamily protein compare
CCNA_R0037 +1.3 4.1 tRNA-Glu compare
CCNA_01173 +1.3 6.9 chorismate mutase compare
CCNA_02941 +1.3 4.4 transcription elongation factor greA compare
CCNA_02467 +1.3 8.2 polyisoprenylphosphate hexose-1-phosphotransferase pssZ compare
CCNA_03105 +1.3 7.3 DnaJ domain protein compare
CCNA_02339 +1.3 8.0 methyltransferase compare
CCNA_02976 +1.3 7.0 MCP-signal associated domain protein compare
CCNA_03062 +1.3 9.3 cell wall hydrolase family protein compare
CCNA_02760 +1.3 2.4 hypothetical protein compare
CCNA_02289 +1.3 7.3 MarR/EmrR family transcriptional regulator compare
CCNA_01061 +1.3 4.7 type I secretion adaptor protein RsaE compare
CCNA_01074 +1.3 2.0 entericidin B-like protein compare
CCNA_03936 +1.3 4.0 hypothetical protein compare
CCNA_02475 +1.3 9.0 transcriptional regulator vanR compare
CCNA_03108 +1.3 9.5 TonB-dependent outer membrane receptor compare
CCNA_01193 +1.3 9.3 amylosucrase compare
CCNA_00705 +1.3 4.3 hypothetical protein compare
CCNA_00527 +1.3 6.8 hypothetical protein compare
CCNA_01827 +1.3 6.2 cobyric acid synthase CobQ compare
CCNA_02534 +1.3 2.1 hypothetical protein compare
CCNA_00505 +1.3 5.5 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_00147 +1.3 1.8 hypothetical protein compare
CCNA_02297 +1.3 4.3 hypoxanthine-guanine phosphoribosyltransferase compare
CCNA_02843 +1.3 3.4 toxin protein parE-3 compare
CCNA_01690 +1.3 4.3 MAPEG family membrane protein compare
CCNA_02728 +1.3 5.8 hypothetical protein compare
CCNA_02081 +1.3 3.3 Sec-independent protein translocase protein tatB compare
CCNA_02324 +1.3 7.8 heat shock protein 33 hsp33 compare
CCNA_00161 +1.3 8.7 hypothetical protein compare
CCNA_00939 +1.3 4.6 MarR-family transcriptional regulator compare
CCNA_02330 +1.3 5.7 hypothetical protein compare
CCNA_03289 +1.2 8.3 HicB-family RNA-binding protein compare
CCNA_01393 +1.2 9.8 soluble lytic murein transglycosylase compare
CCNA_00162 +1.2 6.3 hypothetical protein compare
CCNA_03089 +1.2 5.8 hypothetical protein compare
CCNA_03379 +1.2 2.3 Cro/CI family transcriptional regulator compare
CCNA_02341 +1.2 5.8 small heat shock protein compare
CCNA_03944 +1.2 0.9 hypothetical protein compare
CCNA_01338 +1.2 5.8 glyoxalase family protein compare
CCNA_03107 +1.2 7.8 cytidine deaminase compare
CCNA_00447 +1.2 7.2 chemotaxis protein cheD compare
CCNA_01754 +1.2 1.8 transglycosylase associated protein compare
CCNA_02338 +1.2 6.5 hypothetical protein compare
CCNA_03214 +1.2 6.9 hypothetical protein compare
CCNA_00803 +1.2 4.3 chemotaxis protein cheW compare
CCNA_03612 +1.2 6.1 HTH XRE-family transcriptional regulator compare
CCNA_01094 +1.2 2.5 hypothetical protein compare
CCNA_00750 +1.2 8.2 FeaR-family transcriptional regulator compare
CCNA_02576 +1.2 7.0 phosphoribosylamidoimidazole-succinocarboxamide synthase compare
CCNA_00675 +1.2 4.2 VapC-like PIN domain ribonuclease compare
CCNA_03260 +1.2 4.4 queuosine biosynthesis protein QueD compare
CCNA_02805 +1.2 4.2 hypothetical protein compare
CCNA_02698 +1.2 6.8 Inosine-uridine nucleoside N-ribohydrolase compare
CCNA_01949 +1.2 4.8 bactofilin A BacA compare
CCNA_01678 +1.2 6.0 arginine N-succinyltransferase, beta chain compare
CCNA_00347 +1.2 3.5 hypothetical protein compare
CCNA_01926 +1.2 5.6 GGDEF diguanylate cyclase DgcB compare
CCNA_03808 +1.2 6.9 organic solvent resistance transport system Ttg2C protein compare
CCNA_00847 +1.2 6.3 leucine-responsive regulatory protein compare
CCNA_00885 +1.2 6.2 MazE-like antitoxin protein compare
CCNA_01813 +1.2 6.5 tRNA-dihydrouridine synthase compare
CCNA_01184 +1.2 6.5 MutT/nudix family hydrolase compare
CCNA_02910 +1.2 9.0 TonB-dependent receptor compare
CCNA_00998 +1.2 5.4 ROS/MUCR transcriptional regulator compare
CCNA_03964 +1.2 2.1 hypothetical protein compare
CCNA_02132 +1.2 3.6 LacI-family transcriptional regulator compare
CCNA_01525 +1.1 5.1 flagellar biosynthesis repressor flbT compare
CCNA_00207 +1.1 5.7 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B compare
CCNA_01677 +1.1 4.9 carboxypeptidase G2 precursor compare
CCNA_03689 +1.1 7.9 alanine dehydrogenase compare
CCNA_01608 +1.1 4.9 TetR-family transcriptional regulator compare
CCNA_00448 +1.1 6.6 cheU protein compare
CCNA_01578 +1.1 6.9 beta-lactamase repressor compare
CCNA_03514 +1.1 6.0 cytochrome c oxidase assembly protein ctaG compare
CCNA_00807 +1.1 1.4 ribonuclease P protein component compare
CCNA_01728 +1.1 6.1 short chain dehydrogenase compare
CCNA_03215 +1.1 6.9 ARO8 family aminotransferase/HTH DNA-binding protein compare
CCNA_00400 +1.1 4.9 MarR/EmrR-family transcriptional regulator compare
CCNA_01748 +1.1 6.0 methyltransferase compare
CCNA_00769 +1.1 6.3 TetR family transcriptional regulator compare
CCNA_02841 +1.1 3.7 hypothetical protein compare
CCNA_00947 +1.1 8.1 flagellar hook protein FlgE compare
CCNA_02368 +1.1 8.0 alpha-glucosidase compare
CCNA_00129 +1.1 6.3 hypothetical protein compare
CCNA_00398 +1.1 7.0 hypothetical protein compare
CCNA_00438 +1.1 3.4 hypothetical protein compare
CCNA_02254 +1.1 3.7 isovaleryl-CoA dehydrogenase compare
CCNA_01533 +1.1 6.1 hypothetical protein compare
CCNA_02040 +1.1 2.0 phosphoserine phosphatase compare
CCNA_01575 +1.1 6.6 glucose / sorbosone dehydrogenase compare
CCNA_01580 +1.1 4.9 M15 superfamily membrane peptidase compare
CCNA_01405 +1.1 3.4 GIY-YIG domain protein compare
CCNA_02854 +1.1 3.9 two-component response regulator compare
CCNA_00811 +1.1 4.8 TetR-family transcriptional regulator compare
CCNA_03524 +1.1 5.3 di-/tripeptide transporter compare
CCNA_02560 +1.1 6.8 stalk cross-band protein StpC compare
CCNA_02249 +1.1 3.6 conserved hypothetical cytosolic protein compare
CCNA_00296 +1.1 5.5 phosphate regulon response regulator PhoB compare
CCNA_00521 +1.1 1.6 antitoxin protein compare
CCNA_R0026 +1.1 1.0 tRNA-Gly compare
CCNA_03518 +1.1 7.6 cytochrome c oxidase polypeptide II coxB compare
CCNA_02073 +1.1 3.6 cupin domain transcriptional regulator compare
CCNA_02063 +1.1 4.4 beta-barrel assembly machine (BAM) protein BamD compare
CCNA_00945 +1.1 5.4 chemotaxis protein MotD compare
CCNA_01415 +1.1 7.6 methyltransferase compare
CCNA_01531 +1.1 7.5 acetyltransferase compare
CCNA_01235 +1.1 5.5 AcrR-family transcriptional regulator compare
CCNA_03156 +1.1 4.8 putative periplasmic protein compare


Specific Phenotypes

None in this experiment

For Caulobacter crescentus NA1000 in nitrogen source experiments

For nitrogen source L-Aspartic Acid across organisms