Experiment set1IT078 for Caulobacter crescentus NA1000

Compare to:

Cytidine nitrogen source

200 most detrimental genes:

  gene name fitness t score description  
CCNA_02691 +5.1 22.4 TetR-family transcriptional regulator compare
CCNA_02297 +2.9 10.0 hypoxanthine-guanine phosphoribosyltransferase compare
CCNA_01739 +2.1 12.5 LSU ribosomal protein L9P compare
CCNA_01848 +2.1 13.0 quinol cytochrome oxidase polypeptide IV compare
CCNA_01851 +2.1 16.3 quinol cytochrome oxidase polypeptide II compare
CCNA_01712 +2.1 13.2 CopY/TcrY family transcriptional repressor compare
CCNA_01850 +1.9 14.6 quinol cytochrome oxidase polypeptide I compare
CCNA_00962 +1.9 9.1 MarR-family transcriptional regulator compare
CCNA_00518 +1.9 12.8 LSU ribosomal protein L25P compare
CCNA_02021 +1.9 7.1 hypothetical protein compare
CCNA_01059 +1.9 15.6 S-layer protein rsaA compare
CCNA_01840 +1.8 14.0 MerR-family transcriptional regulator compare
CCNA_02941 +1.8 5.3 transcription elongation factor greA compare
CCNA_02696 +1.8 11.4 AtzE family amidohydrolase compare
CCNA_01849 +1.8 9.5 quinol cytochrome oxidase polypeptide III compare
CCNA_01420 +1.8 8.0 NrdR family transcriptional regulator compare
CCNA_03961 +1.8 4.4 hypothetical protein compare
CCNA_R0026 +1.7 2.2 tRNA-Gly compare
CCNA_01790 +1.7 5.7 protein translocase subunit secG compare
CCNA_01573 +1.7 9.4 ArsR-family transcriptional regulator compare
CCNA_01684 +1.7 7.7 phenylalanine-4-hydroxylase compare
CCNA_02387 +1.7 14.1 glutathione reductase compare
CCNA_R0037 +1.7 6.5 tRNA-Glu compare
CCNA_02026 +1.7 5.2 hypothetical protein compare
CCNA_03064 +1.7 8.3 PadR-family transcriptional regulator compare
CCNA_00699 +1.7 6.9 LSU ribosomal protein L28P compare
CCNA_03951 +1.7 8.6 hypothetical protein compare
CCNA_01780 +1.7 11.7 exopolyphosphatase compare
CCNA_01801 +1.7 8.0 hypothetical protein compare
CCNA_00648 +1.7 12.1 nitrate response regulator NasT compare
CCNA_02250 +1.6 4.4 methylcrotonyl-CoA carboxylase biotin-containing subunit compare
CCNA_01804 +1.6 8.7 glutathione peroxidase compare
CCNA_01742 +1.6 6.6 hypothetical protein compare
CCNA_02591 +1.6 7.9 glutaredoxin compare
CCNA_02000 +1.6 2.3 SSU ribosomal protein S2P compare
CCNA_01826 +1.6 9.9 vitamin B12 receptor compare
CCNA_03948 +1.6 2.9 hypothetical protein compare
CCNA_02695 +1.5 4.6 hypothetical protein compare
CCNA_01060 +1.5 5.8 type I protein secretion ATP-binding protein RsaD compare
CCNA_00939 +1.5 5.6 MarR-family transcriptional regulator compare
CCNA_02030 +1.5 6.4 hypothetical protein compare
CCNA_02004 +1.5 3.1 SOS-induced inhibitor of cell division SidA compare
CCNA_00015 +1.5 10.5 molybdenum cofactor biosynthesis protein B compare
CCNA_01752 +1.5 8.2 YicC-family protein compare
CCNA_02957 +1.5 5.5 ArsR-family transcriptional regulator compare
CCNA_00017 +1.5 8.0 molybdopterin converting factor, small subunit compare
CCNA_01913 +1.5 8.6 MarR-family transcriptional regulator compare
CCNA_01525 +1.5 7.1 flagellar biosynthesis repressor flbT compare
CCNA_01751 +1.5 5.2 aminodeoxychorismate lyase compare
CCNA_03280 +1.5 12.6 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_02878 +1.5 1.9 hypothetical protein compare
CCNA_R0054 +1.5 2.4 tRNA-Gly compare
CCNA_02980 +1.5 9.4 tryptophan 2,3-dioxygenase compare
CCNA_01847 +1.5 10.0 cytochrome c oxidase assembly protein Surf1 compare
CCNA_01037 +1.4 8.8 GntR-family transcriptional regulator compare
CCNA_02701 +1.4 10.2 xanthine dehydrogenase large subunit compare
CCNA_01979 +1.4 5.2 LexA repressor compare
CCNA_01802 +1.4 2.9 hypothetical protein compare
CCNA_00161 +1.4 7.9 hypothetical protein compare
CCNA_01690 +1.4 3.7 MAPEG family membrane protein compare
CCNA_00264 +1.4 8.6 C4-dicarboxylate transport protein compare
CCNA_02448 +1.4 10.6 hypothetical protein compare
CCNA_01942 +1.4 6.3 Rrf2 family protein compare
CCNA_01526 +1.4 4.7 flagellar biosynthesis regulatory protein flaF compare
CCNA_01094 +1.4 2.9 hypothetical protein compare
CCNA_02025 +1.4 3.4 hypothetical protein compare
CCNA_02447 +1.4 10.5 PspA/IM30 family regulatory protein compare
CCNA_00505 +1.4 6.3 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_03252 +1.4 11.9 CopY/TcrY-family transcriptional regulator compare
CCNA_02700 +1.4 10.1 xanthine dehydrogenase accessory protein XdhC compare
CCNA_03123 +1.4 8.9 ArsR-family transcriptional regulator compare
CCNA_02576 +1.4 8.7 phosphoribosylamidoimidazole-succinocarboxamide synthase compare
CCNA_03289 +1.4 9.3 HicB-family RNA-binding protein compare
CCNA_00846 +1.4 11.8 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_01691 +1.4 6.6 tRNA/rRNA methyltransferase compare
CCNA_00014 +1.4 9.6 molybdenum cofactor biosynthesis protein C compare
CCNA_01931 +1.4 7.4 TetR-family transcriptional regulator compare
CCNA_02619 +1.4 11.2 stomatin/prohibitin-related protein compare
CCNA_02575 +1.4 4.5 hypothetical protein compare
CCNA_03989 +1.4 9.7 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_00684 +1.4 5.4 anti-sigma factor, ChrR-family compare
CCNA_02103 +1.4 6.8 hypothetical protein compare
CCNA_02028 +1.4 1.6 NTF2 superfamily protein compare
CCNA_02132 +1.4 5.6 LacI-family transcriptional regulator compare
CCNA_03824 +1.3 8.2 2-polyprenylphenol 6-hydroxylase accessory protein UbiB compare
CCNA_02617 +1.3 9.4 histidinol-phosphate aminotransferase compare
CCNA_02270 +1.3 4.2 MarR-family transcriptional regulator compare
CCNA_02702 +1.3 9.0 xanthine dehydrogenase small subunit compare
CCNA_03271 +1.3 8.7 methionine gamma-lyase compare
CCNA_01541 +1.3 8.6 LysR-family transcriptional regulator compare
CCNA_03287 +1.3 6.4 PadR-family transcriptional regulator compare
CCNA_01624 +1.3 5.9 orotate phosphoribosyltransferase compare
CCNA_02534 +1.3 2.3 hypothetical protein compare
CCNA_01655 +1.3 6.4 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_03012 +1.3 6.8 peroxiredoxin compare
CCNA_03401 +1.3 6.0 conserved hypothetical cytosolic protein compare
CCNA_01593 +1.3 7.2 Xaa-pro aminopeptidase compare
CCNA_02687 +1.3 6.1 serine-pyruvate aminotransferase compare
CCNA_02289 +1.3 7.8 MarR/EmrR family transcriptional regulator compare
CCNA_03515 +1.3 6.0 hypothetical protein compare
CCNA_00018 +1.3 8.6 molybdenum cofactor biosynthesis protein A compare
CCNA_02646 +1.3 2.1 cell division protein MraZ compare
CCNA_03959 +1.3 1.6 hypothetical protein compare
CCNA_00930 +1.3 8.6 riboflavin synthase alpha chain compare
CCNA_03740 +1.3 6.7 cysteine synthase compare
CCNA_00527 +1.3 6.3 hypothetical protein compare
CCNA_00895 +1.3 5.5 hypothetical protein compare
CCNA_03858 +1.3 9.5 protein translocase subunit secB compare
CCNA_01827 +1.2 5.4 cobyric acid synthase CobQ compare
CCNA_01731 +1.2 6.1 colicin V production protein CvpA compare
CCNA_01679 +1.2 7.2 succinylglutamic semialdehyde dehydrogenase compare
CCNA_01681 +1.2 5.0 RimI-like acetyltransferase compare
CCNA_02367 +1.2 9.1 CelR-family transcriptional regulator compare
CCNA_02042 +1.2 8.1 trigger factor chaperone compare
CCNA_01619 +1.2 7.1 NYN domain protein compare
CCNA_02841 +1.2 3.9 hypothetical protein compare
CCNA_00931 +1.2 7.8 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase compare
CCNA_00028 +1.2 4.6 TonB-dependent receptor compare
CCNA_00521 +1.2 2.0 antitoxin protein compare
CCNA_01453 +1.2 3.5 electron transport complex I subunit, NADH-ubiquinone oxidoreductase compare
CCNA_01173 +1.2 5.8 chorismate mutase compare
CCNA_01361 +1.2 2.4 PepSY superfamily protein compare
CCNA_01728 +1.2 6.2 short chain dehydrogenase compare
CCNA_02616 +1.2 7.3 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_02728 +1.2 6.3 hypothetical protein compare
CCNA_01061 +1.2 5.2 type I secretion adaptor protein RsaE compare
CCNA_02339 +1.2 7.5 methyltransferase compare
CCNA_02368 +1.2 8.7 alpha-glucosidase compare
CCNA_00162 +1.2 5.9 hypothetical protein compare
CCNA_00207 +1.2 6.1 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B compare
CCNA_00756 +1.2 2.7 hypothetical protein compare
CCNA_03129 +1.2 8.7 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_02942 +1.2 3.7 nucleoside-diphosphate-sugar epimerase compare
CCNA_00332 +1.2 7.0 molybdenum transport system permease protein modB compare
CCNA_01393 +1.2 9.1 soluble lytic murein transglycosylase compare
CCNA_00929 +1.2 8.4 Riboflavin-specific deaminase family protein compare
CCNA_01186 +1.2 5.9 hypothetical protein compare
CCNA_03108 +1.2 8.6 TonB-dependent outer membrane receptor compare
CCNA_00331 +1.2 7.5 molybdate-binding protein compare
CCNA_01926 +1.2 6.4 GGDEF diguanylate cyclase DgcB compare
CCNA_03315 +1.2 6.7 molybdopterin biosynthesis MoeA protein compare
CCNA_03479 +1.2 5.4 MarR-family transcriptional regulator compare
CCNA_02732 +1.2 3.0 hypothetical protein compare
CCNA_03400 +1.2 3.8 hypothetical protein compare
CCNA_01528 +1.2 6.6 flagellin fljK compare
CCNA_02063 +1.1 4.3 beta-barrel assembly machine (BAM) protein BamD compare
CCNA_02467 +1.1 7.5 polyisoprenylphosphate hexose-1-phosphotransferase pssZ compare
CCNA_02252 +1.1 3.3 methylcrotonyl-CoA carboxylase carboxyl transferase subunit compare
CCNA_02379 +1.1 7.3 hypothetical protein compare
CCNA_02012 +1.1 6.3 metal-dependent hydrolase compare
CCNA_03030 +1.1 5.8 cytochrome c2 compare
CCNA_02805 +1.1 4.1 hypothetical protein compare
CCNA_02475 +1.1 8.4 transcriptional regulator vanR compare
CCNA_00919 +1.1 5.7 hypothetical protein compare
CCNA_00292 +1.1 2.3 phosphate transport system permease protein pstC compare
CCNA_03516 +1.1 3.9 protoheme IX farnesyltransferase coxE compare
CCNA_01678 +1.1 5.6 arginine N-succinyltransferase, beta chain compare
CCNA_03062 +1.1 7.5 cell wall hydrolase family protein compare
CCNA_02066 +1.1 6.9 phytoene/squalene synthase family protein compare
CCNA_03214 +1.1 6.2 hypothetical protein compare
CCNA_00705 +1.1 3.7 hypothetical protein compare
CCNA_01193 +1.1 8.0 amylosucrase compare
CCNA_03524 +1.1 6.0 di-/tripeptide transporter compare
CCNA_03325 +1.1 3.6 hypothetical protein compare
CCNA_03878 +1.1 1.0 ferrochelatase compare
CCNA_03689 +1.1 7.5 alanine dehydrogenase compare
CCNA_00803 +1.1 4.7 chemotaxis protein cheW compare
CCNA_03936 +1.1 2.9 hypothetical protein compare
CCNA_03808 +1.1 6.5 organic solvent resistance transport system Ttg2C protein compare
CCNA_02589 +1.1 2.6 BolA-related transcriptional regulator compare
CCNA_02737 +1.1 2.5 queuosine biosynthesis protein QueF compare
CCNA_03805 +1.1 7.3 PadR-family transcriptional regulator compare
CCNA_02338 +1.1 6.4 hypothetical protein compare
CCNA_02761 +1.1 3.6 hypothetical protein compare
CCNA_01748 +1.1 5.8 methyltransferase compare
CCNA_02976 +1.1 5.2 MCP-signal associated domain protein compare
CCNA_00441 +1.1 4.6 chemotaxis receiver domain protein cheYI compare
CCNA_01680 +1.1 6.1 succinylarginine dihydrolase compare
CCNA_00447 +1.0 5.2 chemotaxis protein cheD compare
CCNA_02729 +1.0 8.2 oligopeptide transporter compare
CCNA_00392 +1.0 8.1 dihydroorotase compare
CCNA_02324 +1.0 6.3 heat shock protein 33 hsp33 compare
CCNA_01968 +1.0 2.6 pentapeptide repeats containing protein compare
CCNA_00947 +1.0 7.7 flagellar hook protein FlgE compare
CCNA_03954 +1.0 1.4 hypothetical protein compare
CCNA_00153 +1.0 4.4 adenine nucleotide exchange factor GrpE compare
CCNA_01235 +1.0 6.1 AcrR-family transcriptional regulator compare
CCNA_02910 +1.0 8.3 TonB-dependent receptor compare
CCNA_03519 +1.0 4.2 PadR-family transcriptional regulator compare
CCNA_03893 +1.0 2.0 hypothetical protein compare
CCNA_02614 +1.0 5.7 fumarylacetoacetase superfamily protein compare
CCNA_02254 +1.0 3.5 isovaleryl-CoA dehydrogenase compare
CCNA_03420 +1.0 6.7 hypothetical protein compare
CCNA_03944 +1.0 1.0 hypothetical protein compare
CCNA_00750 +1.0 7.3 FeaR-family transcriptional regulator compare
CCNA_00726 +1.0 7.6 acyl-CoA dehydrogenase compare
CCNA_03762 +1.0 2.6 acetolactate synthase-related protein compare
CCNA_01578 +1.0 5.3 beta-lactamase repressor compare
CCNA_00944 +1.0 5.3 flagellar hook length determination protein compare
CCNA_01629 +1.0 6.0 signal peptidase I compare


Specific Phenotypes

For 2 genes in this experiment

For nitrogen source Cytidine in Caulobacter crescentus NA1000

For nitrogen source Cytidine across organisms