Experiment set1IT075 for Caulobacter crescentus NA1000

Compare to:

D-Glucosamine Hydrochloride nitrogen source

200 most detrimental genes:

  gene name fitness t score description  
CCNA_01037 +7.1 38.3 GntR-family transcriptional regulator compare
CCNA_03453 +3.5 14.9 AcrR-family transcriptional regulator compare
CCNA_01059 +3.2 28.3 S-layer protein rsaA compare
CCNA_03876 +3.2 4.2 transcription termination factor rho compare
CCNA_02028 +2.9 4.7 NTF2 superfamily protein compare
CCNA_01060 +2.9 11.0 type I protein secretion ATP-binding protein RsaD compare
CCNA_00919 +2.8 14.5 hypothetical protein compare
CCNA_02133 +2.7 12.3 glucokinase compare
CCNA_02270 +2.6 7.9 MarR-family transcriptional regulator compare
CCNA_02030 +2.6 8.0 hypothetical protein compare
CCNA_02026 +2.6 10.2 hypothetical protein compare
CCNA_01061 +2.6 10.5 type I secretion adaptor protein RsaE compare
CCNA_01712 +2.5 20.6 CopY/TcrY family transcriptional repressor compare
CCNA_02941 +2.5 6.5 transcription elongation factor greA compare
CCNA_00920 +2.5 5.3 hypothetical protein compare
CCNA_02066 +2.4 13.9 phytoene/squalene synthase family protein compare
CCNA_01159 +2.4 15.2 transporter, major facilitator superfamily compare
CCNA_03030 +2.4 14.4 cytochrome c2 compare
CCNA_03858 +2.4 14.3 protein translocase subunit secB compare
CCNA_01923 +2.4 11.3 ATP-dependent RNA helicase compare
CCNA_01848 +2.3 12.6 quinol cytochrome oxidase polypeptide IV compare
CCNA_00505 +2.3 9.4 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_02646 +2.2 3.5 cell division protein MraZ compare
CCNA_01780 +2.2 16.0 exopolyphosphatase compare
CCNA_02416 +2.2 11.5 DNA-binding protein HU compare
CCNA_03064 +2.2 11.5 PadR-family transcriptional regulator compare
CCNA_03643 +2.2 3.3 succinate dehydrogenase membrane anchor subunit compare
CCNA_01851 +2.2 16.9 quinol cytochrome oxidase polypeptide II compare
CCNA_02021 +2.1 9.9 hypothetical protein compare
CCNA_00215 +2.1 12.8 SapC surface layer protein compare
CCNA_03252 +2.1 16.9 CopY/TcrY-family transcriptional regulator compare
CCNA_01964 +2.0 6.7 NADH dehydrogenase compare
CCNA_00699 +2.0 9.4 LSU ribosomal protein L28P compare
CCNA_00161 +2.0 14.0 hypothetical protein compare
CCNA_00684 +2.0 7.5 anti-sigma factor, ChrR-family compare
CCNA_03961 +2.0 6.8 hypothetical protein compare
CCNA_01840 +2.0 15.8 MerR-family transcriptional regulator compare
CCNA_02042 +2.0 10.4 trigger factor chaperone compare
CCNA_01849 +1.9 10.2 quinol cytochrome oxidase polypeptide III compare
CCNA_00362 +1.9 4.7 zinc uptake regulation protein compare
CCNA_02199 +1.9 15.0 methyltransferase compare
CCNA_03287 +1.9 11.3 PadR-family transcriptional regulator compare
CCNA_01850 +1.9 14.2 quinol cytochrome oxidase polypeptide I compare
CCNA_03289 +1.9 9.1 HicB-family RNA-binding protein compare
CCNA_01931 +1.9 10.3 TetR-family transcriptional regulator compare
CCNA_03519 +1.9 6.9 PadR-family transcriptional regulator compare
CCNA_01979 +1.8 10.4 LexA repressor compare
CCNA_03824 +1.8 13.3 2-polyprenylphenol 6-hydroxylase accessory protein UbiB compare
CCNA_01728 +1.8 9.6 short chain dehydrogenase compare
CCNA_03805 +1.8 10.3 PadR-family transcriptional regulator compare
CCNA_01433 +1.8 5.6 integration host factor alpha-subunit compare
CCNA_03012 +1.8 9.3 peroxiredoxin compare
CCNA_02957 +1.8 5.6 ArsR-family transcriptional regulator compare
CCNA_01942 +1.8 9.8 Rrf2 family protein compare
CCNA_00648 +1.8 13.2 nitrate response regulator NasT compare
CCNA_02103 +1.7 9.3 hypothetical protein compare
CCNA_03115 +1.7 7.3 cobaltochelatase cobS subunit compare
CCNA_01826 +1.7 10.1 vitamin B12 receptor compare
CCNA_03280 +1.7 14.8 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_02098 +1.7 11.4 molybdopterin-guanine dinucleotide biosynthesis protein A compare
CCNA_02591 +1.7 7.9 glutaredoxin compare
CCNA_02289 +1.7 10.0 MarR/EmrR family transcriptional regulator compare
CCNA_00296 +1.7 6.7 phosphate regulon response regulator PhoB compare
CCNA_00939 +1.7 5.5 MarR-family transcriptional regulator compare
CCNA_01801 +1.7 7.0 hypothetical protein compare
CCNA_01790 +1.7 6.0 protein translocase subunit secG compare
CCNA_01804 +1.7 9.0 glutathione peroxidase compare
CCNA_03740 +1.6 8.6 cysteine synthase compare
CCNA_02250 +1.6 4.2 methylcrotonyl-CoA carboxylase biotin-containing subunit compare
CCNA_03420 +1.6 8.9 hypothetical protein compare
CCNA_02004 +1.6 3.1 SOS-induced inhibitor of cell division SidA compare
CCNA_00454 +1.6 7.6 GntR-family transcriptional regulator conserved
CCNA_01751 +1.6 8.0 aminodeoxychorismate lyase compare
CCNA_02000 +1.5 2.2 SSU ribosomal protein S2P compare
CCNA_02387 +1.5 11.4 glutathione reductase compare
CCNA_01573 +1.5 8.8 ArsR-family transcriptional regulator compare
CCNA_02025 +1.5 4.9 hypothetical protein compare
CCNA_01067 +1.5 11.4 type I secretion outer membrane protein RsaFa compare
CCNA_02534 +1.5 3.3 hypothetical protein compare
CCNA_03959 +1.5 1.3 hypothetical protein compare
CCNA_01525 +1.5 6.9 flagellar biosynthesis repressor flbT compare
CCNA_00264 +1.5 9.2 C4-dicarboxylate transport protein compare
CCNA_03951 +1.5 6.2 hypothetical protein compare
CCNA_01094 +1.5 3.0 hypothetical protein compare
CCNA_01622 +1.5 4.5 Rsh ppGpp hydrolase-synthetase compare
CCNA_01752 +1.5 6.9 YicC-family protein compare
CCNA_01847 +1.5 9.5 cytochrome c oxidase assembly protein Surf1 compare
CCNA_03989 +1.4 10.2 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_01684 +1.4 7.2 phenylalanine-4-hydroxylase compare
CCNA_02728 +1.4 7.6 hypothetical protein compare
CCNA_01742 +1.4 6.1 hypothetical protein compare
CCNA_01655 +1.4 7.0 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_01361 +1.4 2.8 PepSY superfamily protein compare
CCNA_00518 +1.4 8.0 LSU ribosomal protein L25P compare
CCNA_02081 +1.4 3.2 Sec-independent protein translocase protein tatB compare
CCNA_01453 +1.4 4.4 electron transport complex I subunit, NADH-ubiquinone oxidoreductase compare
CCNA_02474 +1.4 5.5 MarR-family transcriptional regulator compare
CCNA_00708 +1.4 6.6 cobaltochelatase cobT subunit compare
CCNA_03325 +1.4 4.6 hypothetical protein compare
CCNA_00506 +1.4 7.9 cytochrome b compare
CCNA_00527 +1.4 6.9 hypothetical protein compare
CCNA_03271 +1.4 9.3 methionine gamma-lyase compare
CCNA_00507 +1.4 7.0 cytochrome c1 compare
CCNA_00162 +1.4 5.9 hypothetical protein compare
CCNA_01739 +1.4 5.6 LSU ribosomal protein L9P compare
CCNA_00846 +1.4 11.9 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_03123 +1.4 7.4 ArsR-family transcriptional regulator compare
CCNA_00028 +1.4 5.5 TonB-dependent receptor compare
CCNA_01913 +1.4 8.5 MarR-family transcriptional regulator compare
CCNA_03832 +1.4 6.9 TetR-family transcriptional regulator compare
CCNA_03893 +1.4 3.0 hypothetical protein compare
CCNA_03524 +1.4 6.5 di-/tripeptide transporter compare
CCNA_01681 +1.3 5.6 RimI-like acetyltransferase compare
CCNA_02910 +1.3 10.6 TonB-dependent receptor compare
CCNA_01802 +1.3 3.2 hypothetical protein compare
CCNA_02644 +1.3 3.5 cell division protein FtsL compare
CCNA_01583 +1.3 2.5 phosphate-binding protein compare
CCNA_03964 +1.3 2.6 hypothetical protein compare
CCNA_01541 +1.3 9.3 LysR-family transcriptional regulator compare
CCNA_03384 +1.3 2.0 LSU ribosomal protein L31P compare
CCNA_03808 +1.3 7.6 organic solvent resistance transport system Ttg2C protein compare
CCNA_02447 +1.3 9.0 PspA/IM30 family regulatory protein compare
CCNA_00847 +1.3 6.2 leucine-responsive regulatory protein compare
CCNA_00998 +1.3 6.0 ROS/MUCR transcriptional regulator compare
CCNA_03515 +1.3 5.1 hypothetical protein compare
CCNA_00756 +1.3 2.9 hypothetical protein compare
CCNA_02980 +1.3 8.9 tryptophan 2,3-dioxygenase compare
CCNA_03514 +1.3 6.8 cytochrome c oxidase assembly protein ctaG compare
CCNA_03479 +1.3 6.5 MarR-family transcriptional regulator compare
CCNA_00895 +1.3 6.7 hypothetical protein compare
CCNA_03072 +1.3 4.2 TetR-family transcriptional regulator compare
CCNA_R0037 +1.3 4.4 tRNA-Glu compare
CCNA_02252 +1.3 3.5 methylcrotonyl-CoA carboxylase carboxyl transferase subunit compare
CCNA_02324 +1.3 7.1 heat shock protein 33 hsp33 compare
CCNA_02617 +1.2 8.5 histidinol-phosphate aminotransferase compare
CCNA_03043 +1.2 4.0 type IV pilin protein pilA compare
CCNA_02012 +1.2 7.0 metal-dependent hydrolase compare
CCNA_02448 +1.2 8.8 hypothetical protein compare
CCNA_02619 +1.2 9.2 stomatin/prohibitin-related protein compare
CCNA_03944 +1.2 0.9 hypothetical protein compare
CCNA_02589 +1.2 2.1 BolA-related transcriptional regulator compare
CCNA_03379 +1.2 2.1 Cro/CI family transcriptional regulator compare
CCNA_01926 +1.2 5.8 GGDEF diguanylate cyclase DgcB compare
CCNA_02576 +1.2 7.0 phosphoribosylamidoimidazole-succinocarboxamide synthase compare
CCNA_03609 +1.2 2.9 outer membrane protein compare
CCNA_01619 +1.2 5.8 NYN domain protein compare
CCNA_01939 +1.2 2.9 ADP-ribosylglycohydrolase compare
CCNA_03108 +1.2 8.7 TonB-dependent outer membrane receptor compare
CCNA_01968 +1.2 2.7 pentapeptide repeats containing protein compare
CCNA_03281 +1.2 9.8 AsnC-family transcriptional regulator compare
CCNA_02475 +1.2 8.4 transcriptional regulator vanR compare
CCNA_00210 +1.2 8.9 TonB-dependent receptor compare
CCNA_03352 +1.2 5.2 YebC/PmpR transcriptional regulator compare
CCNA_01593 +1.2 6.8 Xaa-pro aminopeptidase compare
CCNA_01679 +1.2 6.5 succinylglutamic semialdehyde dehydrogenase compare
CCNA_01057 +1.2 7.1 hypothetical protein compare
CCNA_01420 +1.2 4.6 NrdR family transcriptional regulator compare
CCNA_00803 +1.2 4.5 chemotaxis protein cheW compare
CCNA_00848 +1.1 2.6 leucine-responsive regulatory protein compare
CCNA_02805 +1.1 4.2 hypothetical protein compare
CCNA_03612 +1.1 5.9 HTH XRE-family transcriptional regulator compare
CCNA_00675 +1.1 4.8 VapC-like PIN domain ribonuclease compare
CCNA_02616 +1.1 7.1 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_01235 +1.1 6.7 AcrR-family transcriptional regulator compare
CCNA_00129 +1.1 4.6 hypothetical protein compare
CCNA_02063 +1.1 4.7 beta-barrel assembly machine (BAM) protein BamD compare
CCNA_01393 +1.1 8.7 soluble lytic murein transglycosylase compare
CCNA_02339 +1.1 6.9 methyltransferase compare
CCNA_03913 +1.1 1.3 hypothetical protein compare
CCNA_03622 +1.1 5.8 beta-lactamase repressor compare
CCNA_03391 +1.1 6.6 Cro/CI family transcriptional regulator compare
CCNA_00807 +1.1 1.3 ribonuclease P protein component compare
CCNA_03516 +1.1 4.3 protoheme IX farnesyltransferase coxE compare
CCNA_01731 +1.1 4.3 colicin V production protein CvpA compare
CCNA_01596 +1.1 3.9 DNA helicase II compare
CCNA_01186 +1.1 5.1 hypothetical protein compare
CCNA_01116 +1.1 8.3 histidine protein kinase DivJ compare
CCNA_01528 +1.1 6.4 flagellin fljK compare
CCNA_01339 +1.1 4.3 ArsR-family transcriptional regulator compare
CCNA_03129 +1.1 8.2 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_01338 +1.1 6.3 glyoxalase family protein compare
CCNA_00031 +1.1 5.5 toxin protein VapC compare
CCNA_03215 +1.1 6.6 ARO8 family aminotransferase/HTH DNA-binding protein compare
CCNA_03214 +1.1 5.1 hypothetical protein compare
CCNA_01173 +1.1 5.5 chorismate mutase compare
CCNA_00368 +1.1 6.3 phosphonates transport system permease protein phnE compare
CCNA_02841 +1.1 3.4 hypothetical protein compare
CCNA_00834 +1.1 4.7 flagellin FljM compare
CCNA_01406 +1.1 4.7 metal-dependent hydrolase compare
CCNA_02729 +1.1 8.0 oligopeptide transporter compare
CCNA_00992 +1.1 7.2 hypothetical protein compare
CCNA_01193 +1.1 7.4 amylosucrase compare
CCNA_02760 +1.0 2.3 hypothetical protein compare
CCNA_02330 +1.0 4.3 hypothetical protein compare
CCNA_01608 +1.0 5.3 TetR-family transcriptional regulator compare
CCNA_01025 +1.0 5.6 hypothetical protein compare
CCNA_00860 +1.0 4.1 holdfast inhibitor protein HfiA compare
CCNA_02969 +1.0 5.3 TetR-family transcriptional regulator compare
CCNA_02338 +1.0 6.2 hypothetical protein compare
CCNA_00207 +1.0 4.7 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B compare


Specific Phenotypes

For 4 genes in this experiment

For nitrogen source D-Glucosamine Hydrochloride in Caulobacter crescentus NA1000

For nitrogen source D-Glucosamine Hydrochloride across organisms