Experiment set1IT074 for Pedobacter sp. GW460-11-11-14-LB5
R2A with Tetracycline hydrochloride 0.0005 mg/ml
Group: stressMedia: R2A + Tetracycline hydrochloride (5e-04 mg/ml)
Culturing: Pedo557_ML3, 24-well transparent microplate; Multitron, Aerobic, at 30 (C), shaken=700 rpm
Growth: about 4.5 generations
By: Adam on 17-May-17
Media components: 0.5 g/L Bacto Peptone, 0.5 g/L casamino acids, 0.5 g/L Yeast Extract, 0.5 g/L D-Glucose, 0.5 g/L Starch, 0.3 g/L Potassium phosphate dibasic, 0.05 g/L Magnesium Sulfate Heptahydrate, 0.3 g/L Sodium pyruvate
Growth plate: 1751 B2
Specific Phenotypes
For 13 genes in this experiment
For stress Tetracycline hydrochloride in Pedobacter sp. GW460-11-11-14-LB5
For stress Tetracycline hydrochloride across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Multidrug Resistance Efflux Pumps | 2 |
| DNA repair, bacterial MutL-MutS system | 1 |
| Multidrug efflux pump in Campylobacter jejuni (CmeABC operon) | 1 |
| Ton and Tol transport systems | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Ubiquinone and menaquinone biosynthesis
- Fatty acid biosynthesis
- Histidine metabolism
- Tyrosine metabolism
- Tryptophan metabolism
- Benzoxazinone biosynthesis
- alpha-Linolenic acid metabolism
- Naphthalene and anthracene degradation
- Benzoate degradation via CoA ligation
- Porphyrin and chlorophyll metabolism
- Limonene and pinene degradation
- Carotenoid biosynthesis - General
- Phenylpropanoid biosynthesis
- Flavonoid biosynthesis
- Anthocyanin biosynthesis
- Alkaloid biosynthesis I
- Insect hormone biosynthesis
- Biosynthesis of unsaturated fatty acids
- Biosynthesis of alkaloids derived from shikimate pathway
- Biosynthesis of plant hormones