Experiment set1IT071 for Pantoea sp. MT58

Compare to:

Potassium dichromate 5 uM, aerobic

200 most important genes:

  gene name fitness t score description  
IAI47_06235 -5.8 -5.6 4-phosphoerythronate dehydrogenase PdxB compare
IAI47_16205 -5.5 -9.1 threonine synthase compare
IAI47_04190 -5.3 -10.2 adenylyl-sulfate kinase compare
IAI47_17225 -5.1 -21.9 sulfite reductase subunit alpha compare
IAI47_17220 -5.1 -29.7 glutamate synthase large subunit compare
IAI47_03860 -5.1 -14.3 diaminopimelate decarboxylase compare
IAI47_00900 -5.1 -17.4 acetylornithine deacetylase compare
IAI47_16830 -5.0 -16.9 ornithine carbamoyltransferase compare
IAI47_15605 -4.9 -3.4 Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC compare
IAI47_16010 -4.9 -19.2 3-isopropylmalate dehydratase large subunit compare
IAI47_04185 -4.9 -18.5 sulfate adenylyltransferase subunit CysN compare
IAI47_04180 -4.9 -15.4 sulfate adenylyltransferase subunit CysD compare
IAI47_16015 -4.9 -8.2 3-isopropylmalate dehydratase small subunit compare
IAI47_00905 -4.9 -17.0 N-acetyl-gamma-glutamyl-phosphate reductase compare
IAI47_09190 -4.8 -12.1 anthranilate synthase component 1 compare
IAI47_16215 -4.8 -21.1 bifunctional aspartate kinase/homoserine dehydrogenase I compare
IAI47_00915 -4.8 -20.2 argininosuccinate synthase compare
IAI47_00895 -4.7 -22.6 phosphoenolpyruvate carboxylase compare
IAI47_00910 -4.7 -13.9 acetylglutamate kinase compare
IAI47_09170 -4.7 -9.0 tryptophan synthase subunit beta compare
IAI47_09175 -4.7 -13.2 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
IAI47_00785 -4.7 -23.2 sulfate ABC transporter substrate-binding protein compare
IAI47_09185 -4.7 -6.4 glutamine amidotransferase compare
IAI47_09165 -4.7 -7.1 tryptophan synthase subunit alpha compare
IAI47_14350 -4.6 -8.3 5-(carboxyamino)imidazole ribonucleotide mutase compare
IAI47_07085 -4.6 -16.4 histidinol-phosphate transaminase compare
IAI47_16115 -4.5 -24.3 carbamoyl-phosphate synthase large subunit compare
IAI47_07070 -4.5 -9.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
IAI47_08085 -4.5 -8.9 helix-turn-helix domain-containing protein compare
IAI47_07065 -4.5 -14.1 imidazole glycerol phosphate synthase subunit HisF compare
IAI47_09040 -4.5 -3.2 NAD-dependent epimerase compare
IAI47_04175 -4.4 -15.2 uroporphyrinogen-III C-methyltransferase compare
IAI47_18040 -4.4 -21.4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
IAI47_16120 -4.4 -14.6 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
IAI47_04150 -4.4 -17.6 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit compare
IAI47_01050 -4.4 -22.5 ketol-acid reductoisomerase compare
IAI47_05405 -4.3 -10.0 cysteine synthase CysM compare
IAI47_05275 -4.3 -8.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
IAI47_07095 -4.3 -13.0 ATP phosphoribosyltransferase compare
IAI47_16005 -4.3 -14.5 3-isopropylmalate dehydrogenase compare
IAI47_00880 -4.3 -19.3 cystathionine gamma-synthase compare
IAI47_16000 -4.3 -22.2 2-isopropylmalate synthase compare
IAI47_09180 -4.3 -13.6 anthranilate phosphoribosyltransferase compare
IAI47_00780 -4.2 -5.0 6-phosphofructokinase compare
IAI47_01030 -4.2 -19.2 branched-chain amino acid transaminase compare
IAI47_16210 -4.2 -15.4 homoserine kinase compare
IAI47_18015 -4.2 -19.1 homoserine O-succinyltransferase compare
IAI47_04155 -4.2 -17.0 assimilatory sulfite reductase (NADPH) hemoprotein subunit compare
IAI47_05440 -4.2 -14.5 cysteine synthase A compare
IAI47_06275 -4.1 -20.3 amidophosphoribosyltransferase compare
IAI47_14945 -4.1 -2.9 pyrroline-5-carboxylate reductase compare
IAI47_13770 -4.1 -13.0 citrate synthase compare
IAI47_12645 -4.1 -6.8 porin OmpA compare
IAI47_07090 -4.1 -12.6 histidinol dehydrogenase compare
IAI47_04930 -4.1 -23.2 phosphoribosylformylglycinamidine synthase compare
IAI47_16350 -4.1 -13.3 phosphoserine phosphatase compare
IAI47_05465 -4.1 -7.3 bile acid:sodium symporter compare
IAI47_15115 -4.1 -10.8 glutamate-5-semialdehyde dehydrogenase compare
IAI47_03975 -4.1 -17.8 amino-acid N-acetyltransferase compare
IAI47_07080 -4.0 -12.1 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
IAI47_01035 -4.0 -21.7 dihydroxy-acid dehydratase compare
IAI47_12215 -4.0 -15.4 dihydroorotase compare
IAI47_00655 -4.0 -4.9 glycosyltransferase family 4 protein compare
IAI47_13900 -4.0 -20.1 asparagine synthase B compare
IAI47_04160 -4.0 -16.7 phosphoadenylyl-sulfate reductase compare
IAI47_18045 -4.0 -13.2 phosphoribosylamine--glycine ligase compare
IAI47_07075 -4.0 -13.0 imidazole glycerol phosphate synthase subunit HisH compare
IAI47_01955 -4.0 -17.1 aspartate aminotransferase family protein compare
IAI47_00920 -4.0 -17.6 argininosuccinate lyase compare
IAI47_00455 -4.0 -14.3 nitrogen regulation protein NR(II) compare
IAI47_15120 -3.9 -7.5 glutamate 5-kinase compare
IAI47_12705 -3.9 -15.0 quinone-dependent dihydroorotate dehydrogenase compare
IAI47_15810 -3.9 -2.7 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
IAI47_03725 -3.9 -11.4 phosphoglycerate dehydrogenase compare
IAI47_07060 -3.8 -14.7 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
IAI47_10520 -3.8 -4.5 pyridoxamine 5'-phosphate oxidase compare
IAI47_13740 -3.8 -2.6 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
IAI47_13745 -3.8 -3.7 2-oxoglutarate dehydrogenase E1 component compare
IAI47_12865 -3.8 -12.5 3-phosphoserine/phosphohydroxythreonine transaminase compare
IAI47_05420 -3.7 -2.4 PTS glucose transporter subunit IIA compare
IAI47_16080 -3.7 -11.0 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
IAI47_05180 -3.7 -14.9 phosphoribosylformylglycinamidine cyclo-ligase compare
IAI47_05070 -3.7 -1.4 outer membrane protein assembly factor BamB compare
IAI47_14355 -3.7 -13.7 5-(carboxyamino)imidazole ribonucleotide synthase compare
IAI47_13695 -3.6 -1.4 colicin uptake protein TolR compare
IAI47_15635 -3.6 -3.5 RNA polymerase-binding protein DksA compare
IAI47_13685 -3.6 -3.2 Tol-Pal system protein TolB compare
IAI47_17185 -3.6 -5.5 RNA polymerase factor sigma-54 compare
IAI47_13180 -3.5 -9.4 manganese-binding transcriptional regulator MntR compare
IAI47_04895 -3.4 -5.2 pyridoxine 5'-phosphate synthase compare
IAI47_04410 -3.4 -14.0 bifunctional chorismate mutase/prephenate dehydratase compare
IAI47_01040 -3.3 -12.7 threonine ammonia-lyase, biosynthetic compare
IAI47_00450 -3.3 -15.8 nitrogen regulation protein NR(I) compare
IAI47_02695 -3.2 -13.6 3'(2'),5'-bisphosphate nucleotidase CysQ compare
IAI47_16870 -3.2 -8.3 2-iminobutanoate/2-iminopropanoate deaminase compare
IAI47_06245 -3.2 -5.3 tRNA pseudouridine(38-40) synthase TruA compare
IAI47_16860 -3.1 -14.0 aspartate carbamoyltransferase compare
IAI47_03820 -3.0 -5.7 site-specific tyrosine recombinase XerD compare
IAI47_09240 -3.0 -2.1 HTH-type transcriptional regulator CysB compare
IAI47_18830 -3.0 -2.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
IAI47_04120 -3.0 -18.9 GTP diphosphokinase compare
IAI47_00600 -3.0 -11.1 orotate phosphoribosyltransferase compare
IAI47_13290 -3.0 -11.0 DNA-binding protein YbiB compare
IAI47_09275 -2.9 -10.7 orotidine-5'-phosphate decarboxylase compare
IAI47_12915 -2.9 -11.6 leucine-responsive transcriptional regulator Lrp compare
IAI47_12920 -2.8 -5.0 thioredoxin-disulfide reductase compare
IAI47_13050 -2.7 -4.5 YbjN domain-containing protein compare
IAI47_03855 -2.7 -8.0 LysR family transcriptional regulator compare
IAI47_04300 -2.6 -8.7 recombinase RecA compare
IAI47_06980 -2.6 -4.7 colanic acid biosynthesis pyruvyl transferase WcaK compare
IAI47_15600 -2.6 -3.0 Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD compare
IAI47_07015 -2.5 -6.3 ABC transporter ATP-binding protein compare
IAI47_00460 -2.5 -1.7 glutamate--ammonia ligase compare
IAI47_11760 -2.4 -2.3 TonB-dependent siderophore receptor compare
IAI47_09010 -2.4 -8.2 formyltetrahydrofolate deformylase compare
IAI47_18530 -2.4 -2.7 thioredoxin TrxA compare
IAI47_15595 -2.3 -2.5 Fe(3+)-hydroxamate ABC transporter permease FhuB compare
IAI47_09350 -2.3 -10.0 oxidoreductase compare
IAI47_01365 -2.2 -1.5 inorganic phosphate transporter PitA compare
IAI47_21690 -2.2 -10.5 TetR/AcrR family transcriptional regulator compare
IAI47_07165 -2.2 -2.2 exodeoxyribonuclease I compare
IAI47_06680 -2.1 -5.4 LysR family transcriptional regulator compare
IAI47_21880 -2.1 -1.1 ParA family protein compare
IAI47_17965 -2.1 -11.1 glucose-6-phosphate isomerase compare
IAI47_09360 -2.0 -1.9 peptide ABC transporter ATP-binding protein SapF compare
IAI47_11450 -2.0 -6.9 ankyrin repeat domain-containing protein compare
IAI47_00760 -1.9 -4.4 envelope stress response regulator transcription factor CpxR compare
IAI47_17120 -1.9 -3.9 BolA family iron metabolism protein IbaG compare
IAI47_08450 -1.9 -3.9 Holliday junction branch migration DNA helicase RuvB compare
IAI47_07350 -1.9 -1.2 hypothetical protein compare
IAI47_13760 -1.8 -3.1 succinate dehydrogenase membrane anchor subunit compare
IAI47_14555 -1.8 -3.0 hemolysin expression modulator Hha compare
IAI47_18315 -1.8 -5.9 HTH-type transcriptional regulator MetR compare
IAI47_05425 -1.8 -5.3 phosphoenolpyruvate-protein phosphotransferase PtsI compare
IAI47_08445 -1.8 -1.7 Holliday junction branch migration protein RuvA compare
IAI47_18145 -1.8 -2.7 elongation factor Tu compare
IAI47_17020 -1.8 -3.9 30S ribosome-binding factor RbfA compare
IAI47_18240 -1.7 -2.7 NAD(P)H-flavin reductase compare
IAI47_11830 -1.7 -7.3 muramoyltetrapeptide carboxypeptidase compare
IAI47_06135 -1.7 -3.3 phosphohistidine phosphatase SixA compare
IAI47_18410 -1.6 -4.7 diaminopimelate epimerase compare
IAI47_18400 -1.6 -2.1 tyrosine recombinase XerC compare
IAI47_17035 -1.5 -2.8 ribosome maturation factor RimP compare
IAI47_18520 -1.5 -12.1 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
IAI47_14775 -1.5 -2.7 transcriptional regulator NrdR compare
IAI47_07905 -1.5 -1.1 Arc family DNA-binding protein compare
IAI47_04400 -1.5 -5.7 3-deoxy-7-phosphoheptulonate synthase compare
IAI47_06405 -1.5 -3.1 NADH-quinone oxidoreductase subunit NuoK compare
IAI47_03685 -1.5 -7.2 erythrose-4-phosphate dehydrogenase compare
IAI47_02090 -1.5 -3.1 elongation factor Tu compare
IAI47_15970 -1.5 -1.8 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
IAI47_17000 -1.4 -8.2 lipoprotein NlpI compare
IAI47_02585 -1.4 -2.8 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
IAI47_05155 -1.4 -10.4 polyphosphate kinase 1 compare
IAI47_13690 -1.4 -0.9 cell envelope integrity protein TolA compare
IAI47_06055 -1.3 -4.2 tRNA-Arg compare
IAI47_07010 -1.3 -2.3 ABC transporter permease compare
IAI47_14690 -1.3 -4.7 cytochrome o ubiquinol oxidase subunit III compare
IAI47_03375 -1.3 -6.0 peptide chain release factor 3 compare
IAI47_09245 -1.3 -3.6 YmiA family putative membrane protein compare
IAI47_04865 -1.3 -1.9 SoxR-reducing system protein RseC compare
IAI47_06355 -1.3 -7.1 transcriptional regulator LrhA compare
IAI47_04835 -1.2 -5.7 ATP-dependent RNA helicase SrmB compare
IAI47_00870 -1.2 -0.8 50S ribosomal protein L31 compare
IAI47_04870 -1.2 -4.8 elongation factor 4 compare
IAI47_14685 -1.2 -7.1 cytochrome o ubiquinol oxidase subunit I compare
IAI47_10890 -1.2 -9.1 FAD-binding oxidoreductase compare
IAI47_01100 -1.2 -7.8 malate dehydrogenase (quinone) compare
IAI47_12410 -1.2 -3.8 MarR family transcriptional regulator compare
IAI47_08705 -1.1 -7.6 carboxy terminal-processing peptidase compare
IAI47_00875 -1.1 -1.2 met regulon transcriptional regulator MetJ compare
IAI47_18215 -1.1 -0.8 Trk system potassium transporter TrkH compare
IAI47_06400 -1.1 -2.1 NADH-quinone oxidoreductase subunit J compare
IAI47_00755 -1.1 -6.7 envelope stress sensor histidine kinase CpxA compare
IAI47_06270 -1.0 -5.4 colicin V production protein compare
IAI47_12790 -1.0 -0.8 chromosome partition protein MukE compare
IAI47_16405 -1.0 -3.0 siderophore-iron reductase FhuF compare
IAI47_11420 -1.0 -1.6 hypothetical protein compare
IAI47_03610 -1.0 -3.0 YqgE/AlgH family protein compare
IAI47_07020 -1.0 -1.1 hypothetical protein compare
IAI47_13155 -1.0 -2.2 H-NS histone family protein compare
IAI47_17005 -1.0 -4.9 polyribonucleotide nucleotidyltransferase compare
IAI47_18060 -1.0 -5.6 YjaG family protein compare
IAI47_12175 -1.0 -1.7 anti-sigma-28 factor FlgM compare
IAI47_15840 -1.0 -5.6 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
IAI47_06395 -1.0 -1.1 NADH-quinone oxidoreductase subunit NuoI compare
IAI47_06115 -1.0 -7.0 long-chain fatty acid transporter FadL compare
IAI47_01000 -1.0 -7.1 HTH-type transcriptional regulator HdfR compare
IAI47_07040 -1.0 -3.0 acyltransferase compare
IAI47_04805 -0.9 -3.2 outer membrane protein assembly factor BamE compare
IAI47_02515 -0.9 -2.8 transcriptional regulator ArgR compare
IAI47_15540 -0.9 -4.9 bifunctional uridylyltransferase/uridylyl-removing protein GlnD compare
IAI47_12930 -0.9 -2.6 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC compare
IAI47_13635 -0.9 -4.1 quinolinate synthase NadA compare
IAI47_02685 -0.9 -3.8 FKBP-type peptidyl-prolyl cis-trans isomerase compare
IAI47_18735 -0.9 -3.7 DeoR/GlpR transcriptional regulator compare
IAI47_06420 -0.9 -2.5 NADH-quinone oxidoreductase subunit NuoN compare
IAI47_12030 -0.9 -6.2 PTS glucose transporter subunit IIBC compare
IAI47_05490 -0.9 -2.6 tRNA-Val compare
IAI47_00465 -0.9 -2.1 ribosome-dependent GTPase TypA compare


Specific Phenotypes

For 10 genes in this experiment

For stress Potassium dichromate in Pantoea sp. MT58

For stress Potassium dichromate across organisms