Experiment set1IT071 for Pantoea sp. MT58

Compare to:

Potassium dichromate 5 uM, aerobic

200 most detrimental genes:

  gene name fitness t score description  
IAI47_02895 +2.2 19.4 DedA family protein compare
IAI47_16420 +2.0 17.3 LacI family DNA-binding transcriptional regulator compare
IAI47_06455 +1.8 10.1 ribonucleoside-diphosphate reductase subunit alpha compare
IAI47_05875 +1.7 12.5 lysozyme compare
IAI47_05870 +1.7 9.1 lysis protein compare
IAI47_05865 +1.6 9.3 hypothetical protein compare
IAI47_17235 +1.5 11.8 stringent starvation protein A compare
IAI47_08470 +1.4 12.3 murein DD-endopeptidase MepM compare
IAI47_05860 +1.4 7.2 YlcG family protein compare
IAI47_06320 +1.4 9.1 phosphate acetyltransferase compare
IAI47_17900 +1.4 2.5 glycerol-3-phosphate 1-O-acyltransferase PlsB compare
IAI47_05385 +1.3 11.3 sulfate ABC transporter substrate-binding protein compare
IAI47_14470 +1.3 3.7 YbaB/EbfC family nucleoid-associated protein compare
IAI47_16995 +1.3 2.5 protein YrbN compare
IAI47_05390 +1.3 8.6 sulfate/thiosulfate ABC transporter permease CysT compare
IAI47_06450 +1.3 5.9 ribonucleotide-diphosphate reductase subunit beta compare
IAI47_14075 +1.3 4.9 transcription antiterminator/RNA stability regulator CspE compare
IAI47_08465 +1.2 8.0 zinc ABC transporter substrate-binding protein ZnuA compare
IAI47_12060 +1.2 6.1 beta-ketoacyl-ACP synthase II compare
IAI47_10320 +1.2 2.1 Rrf2 family transcriptional regulator compare
IAI47_15815 +1.2 5.8 pyruvate dehydrogenase complex transcriptional repressor PdhR compare
IAI47_17560 +1.2 2.4 ROK family transcriptional regulator compare
IAI47_07965 +1.2 6.5 transcriptional regulator RcsA compare
IAI47_05880 +1.1 6.2 lysis protein compare
IAI47_12945 +1.1 8.9 ATP-dependent Clp protease ATP-binding subunit ClpA compare
IAI47_05400 +1.1 7.0 sulfate/thiosulfate ABC transporter ATP-binding protein CysA compare
IAI47_01825 +1.0 7.1 two-component system sensor histidine kinase EnvZ compare
IAI47_05395 +1.0 8.6 sulfate/thiosulfate ABC transporter permease CysW compare
IAI47_06655 +1.0 3.5 1-phosphofructokinase compare
IAI47_13070 +1.0 4.6 GrxA family glutaredoxin compare
IAI47_02400 +1.0 2.3 YhdT family protein compare
IAI47_09235 +1.0 1.7 type I DNA topoisomerase compare
IAI47_00710 +1.0 8.6 glycosyltransferase compare
IAI47_15345 +1.0 8.9 murein transglycosylase D compare
IAI47_00835 +1.0 3.0 cell division protein ZapB compare
IAI47_17875 +1.0 7.8 zinc uptake transcriptional repressor Zur compare
IAI47_07000 +1.0 7.3 UDP-glucose 4-epimerase GalE compare
IAI47_12775 +0.9 7.1 YcbK family protein compare
IAI47_06475 +0.9 5.0 transcriptional regulator RcsB compare
IAI47_06625 +0.9 6.8 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
IAI47_17080 +0.9 5.1 transcription elongation factor GreA compare
IAI47_18415 +0.9 2.7 lipoprotein compare
IAI47_06385 +0.9 3.2 NADH-quinone oxidoreductase subunit NuoG compare
IAI47_02465 +0.9 8.0 metalloprotease TldD compare
IAI47_02765 +0.9 7.4 metalloprotease PmbA compare
IAI47_06325 +0.9 4.4 acetate kinase compare
IAI47_05985 +0.8 3.8 hypothetical protein compare
IAI47_16415 +0.8 6.1 nucleoside hydrolase compare
IAI47_13850 +0.8 2.7 LexA regulated protein compare
IAI47_05970 +0.8 4.0 hypothetical protein compare
IAI47_02835 +0.8 5.7 DnaA initiator-associating protein DiaA compare
IAI47_02395 +0.8 7.0 sodium/pantothenate symporter compare
IAI47_05715 +0.8 5.5 hypothetical protein compare
IAI47_05510 +0.8 6.1 putative DNA-binding transcriptional regulator compare
IAI47_17780 +0.8 7.2 hypothetical protein compare
IAI47_05855 +0.8 4.3 recombination protein NinG compare
IAI47_02590 +0.8 3.5 RNA chaperone Hfq compare
IAI47_05915 +0.8 3.9 minor capsid protein compare
IAI47_05955 +0.8 4.1 hypothetical protein compare
IAI47_05710 +0.7 3.2 hypothetical protein compare
IAI47_12305 +0.7 4.4 hypothetical protein compare
IAI47_08010 +0.7 4.5 flagella biosynthesis chaperone FliJ compare
IAI47_03730 +0.7 4.8 5-formyltetrahydrofolate cyclo-ligase compare
IAI47_18580 +0.7 5.7 insulinase family protein compare
IAI47_08015 +0.7 4.5 flagellum-specific ATP synthase FliI compare
IAI47_17170 +0.7 4.0 LPS export ABC transporter periplasmic protein LptC compare
IAI47_08030 +0.7 5.2 flagellar M-ring protein FliF compare
IAI47_03740 +0.7 4.7 cell division protein ZapA compare
IAI47_06170 +0.7 2.2 YfcL family protein compare
IAI47_08000 +0.7 4.4 flagellar basal body-associated protein FliL compare
IAI47_16425 +0.7 4.7 MHS family MFS transporter compare
IAI47_05850 +0.7 2.7 NinF family protein compare
IAI47_02385 +0.7 4.8 tRNA dihydrouridine synthase DusB compare
IAI47_21450 +0.7 0.8 general stress protein compare
IAI47_08005 +0.7 3.7 flagellar hook-length control protein FliK compare
IAI47_19035 +0.7 1.5 transcriptional regulator compare
IAI47_04350 +0.7 5.8 glutamate--cysteine ligase compare
IAI47_14910 +0.7 3.4 recombination-associated protein RdgC compare
IAI47_05980 +0.7 5.8 transglycosylase SLT domain-containing protein compare
IAI47_06250 +0.7 5.0 DedA family protein compare
IAI47_10430 +0.7 1.5 hypothetical protein compare
IAI47_05840 +0.7 4.2 recombination protein NinB compare
IAI47_05995 +0.7 5.8 hypothetical protein compare
IAI47_08190 +0.7 5.0 acyltransferase family protein compare
IAI47_11975 +0.6 5.5 transcription-repair coupling factor compare
IAI47_05930 +0.6 3.8 DUF2184 domain-containing protein compare
IAI47_08840 +0.6 4.0 ribonuclease D compare
IAI47_06750 +0.6 4.8 outer membrane permeability protein SanA compare
IAI47_01545 +0.6 3.7 cell division ATP-binding protein FtsE compare
IAI47_02605 +0.6 4.9 protease modulator HflC compare
IAI47_05760 +0.6 2.8 hypothetical protein compare
IAI47_05900 +0.6 4.5 terminase small subunit compare
IAI47_05815 +0.6 2.8 hypothetical protein compare
IAI47_10675 +0.6 2.7 hypothetical protein compare
IAI47_13845 +0.6 4.3 esterase compare
IAI47_06000 +0.6 4.2 hypothetical protein compare
IAI47_06005 +0.6 4.2 translation initiation factor IF-2 compare
IAI47_05990 +0.6 4.3 hypothetical protein compare
IAI47_05905 +0.6 4.6 PBSX family phage terminase large subunit compare
IAI47_05735 +0.6 2.0 hypothetical protein compare
IAI47_12480 +0.6 4.8 autoinducer synthase compare
IAI47_08285 +0.6 4.7 flagellar transcriptional regulator FlhC compare
IAI47_15690 +0.6 2.5 hypoxanthine phosphoribosyltransferase compare
IAI47_12935 +0.6 3.5 leucyl/phenylalanyl-tRNA--protein transferase compare
IAI47_04490 +0.6 3.4 tRNA/rRNA methyltransferase compare
IAI47_21730 +0.6 2.0 hypothetical protein compare
IAI47_17785 +0.6 5.1 oligosaccharide flippase family protein compare
IAI47_05910 +0.6 4.5 DUF1073 domain-containing protein compare
IAI47_11415 +0.6 0.5 hypothetical protein compare
IAI47_06010 +0.6 2.9 hypothetical protein compare
IAI47_05960 +0.6 4.5 DUF3383 family protein compare
IAI47_10265 +0.6 2.3 helix-turn-helix domain-containing protein compare
IAI47_05845 +0.6 2.4 hypothetical protein compare
IAI47_07975 +0.6 2.4 flagellar biosynthesis protein FliQ compare
IAI47_12470 +0.6 4.9 UvrY/SirA/GacA family response regulator transcription factor compare
IAI47_04335 +0.6 1.9 tRNA-Arg compare
IAI47_05780 +0.6 3.5 hypothetical protein compare
IAI47_04110 +0.6 5.4 two-component sensor histidine kinase BarA compare
IAI47_14510 +0.6 4.8 efflux RND transporter periplasmic adaptor subunit compare
IAI47_01820 +0.6 3.1 two-component system response regulator OmpR compare
IAI47_17385 +0.6 1.5 CDP-alcohol phosphatidyltransferase family protein compare
IAI47_19350 +0.6 1.8 DUF305 domain-containing protein compare
IAI47_05820 +0.6 3.9 DUF3850 domain-containing protein compare
IAI47_13645 +0.6 2.8 helix-turn-helix domain-containing protein compare
IAI47_12140 +0.6 3.7 flagellar basal-body rod protein FlgG compare
IAI47_16955 +0.6 2.9 N-acetyltransferase compare
IAI47_08460 +0.6 3.4 zinc ABC transporter ATP-binding protein ZnuC compare
IAI47_08455 +0.5 3.0 zinc ABC transporter permease subunit ZnuB compare
IAI47_09125 +0.5 1.7 YciI family protein compare
IAI47_11700 +0.5 3.3 SH3 domain-containing protein compare
IAI47_06390 +0.5 1.4 NADH-quinone oxidoreductase subunit NuoH compare
IAI47_05920 +0.5 3.9 DUF2213 domain-containing protein compare
IAI47_05700 +0.5 2.3 hypothetical protein compare
IAI47_08745 +0.5 1.7 transcription antiterminator/RNA stability regulator CspE compare
IAI47_06925 +0.5 3.6 undecaprenyl-phosphate galactose phosphotransferase WbaP compare
IAI47_08020 +0.5 3.1 flagellar assembly protein FliH compare
IAI47_21780 +0.5 1.7 hypothetical protein compare
IAI47_17230 +0.5 3.5 ClpXP protease specificity-enhancing factor compare
IAI47_16825 +0.5 3.4 ribonuclease E inhibitor RraB compare
IAI47_09840 +0.5 2.7 glycosyltransferase family 4 protein compare
IAI47_06445 +0.5 1.8 2Fe-2S ferredoxin-like protein compare
IAI47_19550 +0.5 1.8 DUF1471 domain-containing protein compare
IAI47_09635 +0.5 2.2 hypothetical protein compare
IAI47_05965 +0.5 2.9 DUF3277 family protein compare
IAI47_05680 +0.5 2.5 hypothetical protein compare
IAI47_12950 +0.5 4.2 ATP-dependent Clp protease adapter ClpS compare
IAI47_05835 +0.5 2.9 hypothetical protein compare
IAI47_06025 +0.5 4.3 hypothetical protein compare
IAI47_05705 +0.5 2.4 DNA polymerase III subunit theta compare
IAI47_08025 +0.5 3.3 flagellar motor switch protein FliG compare
IAI47_05935 +0.5 3.1 hypothetical protein compare
IAI47_02600 +0.5 3.7 FtsH protease activity modulator HflK compare
IAI47_05925 +0.5 3.1 hypothetical protein compare
IAI47_19315 +0.5 1.9 type II toxin-antitoxin system Phd/YefM family antitoxin compare
IAI47_09895 +0.5 1.9 GNAT family N-acetyltransferase compare
IAI47_12985 +0.5 1.8 heavy metal-binding domain-containing protein compare
IAI47_17710 +0.5 3.6 glutamate/aspartate:proton symporter GltP compare
IAI47_03815 +0.5 3.1 flavodoxin FldB compare
IAI47_11205 +0.5 2.8 type VI secretion system membrane subunit TssM compare
IAI47_14515 +0.5 4.4 multidrug efflux RND transporter permease subunit compare
IAI47_21015 +0.5 1.5 helix-turn-helix transcriptional regulator compare
IAI47_14040 +0.5 4.2 D-alanyl-D-alanine carboxypeptidase DacA compare
IAI47_05940 +0.5 3.3 DUF4054 domain-containing protein compare
IAI47_05380 +0.5 3.4 RpoE-regulated lipoprotein compare
IAI47_11375 +0.5 1.1 hypothetical protein compare
IAI47_19245 +0.5 1.7 SIS domain-containing protein compare
IAI47_05945 +0.5 2.8 hypothetical protein compare
IAI47_18765 +0.5 1.3 damage-inducible protein J compare
IAI47_07970 +0.5 2.6 flagellar type III secretion system protein FliR compare
IAI47_07930 +0.5 0.9 DUF2158 domain-containing protein compare
IAI47_09210 +0.5 2.4 23S rRNA pseudouridine(2605) synthase RluB compare
IAI47_13840 +0.5 1.6 replication initiation negative regulator SeqA compare
IAI47_14930 +0.5 1.3 shikimate kinase AroL compare
IAI47_20000 +0.4 2.2 PTS sugar transporter subunit IIB compare
IAI47_10545 +0.4 0.9 hypothetical protein compare
IAI47_08955 +0.4 2.2 DUF1315 family protein compare
IAI47_05885 +0.4 3.1 hypothetical protein compare
IAI47_07895 +0.4 2.9 hypothetical protein compare
IAI47_00290 +0.4 1.6 F0F1 ATP synthase subunit I compare
IAI47_20440 +0.4 2.0 SDR family oxidoreductase compare
IAI47_09490 +0.4 2.0 DUF333 domain-containing protein compare
IAI47_05695 +0.4 3.5 hypothetical protein compare
IAI47_05825 +0.4 1.9 hypothetical protein compare
IAI47_06045 +0.4 2.4 phage repressor protein compare
IAI47_00725 +0.4 1.7 rhodanese-like domain-containing protein compare
IAI47_17685 +0.4 2.1 AraC family transcriptional regulator compare
IAI47_05730 +0.4 3.0 ATP-binding protein compare
IAI47_06015 +0.4 3.6 baseplate J/gp47 family protein compare
IAI47_05750 +0.4 2.8 hypothetical protein compare
IAI47_05675 +0.4 2.6 class I SAM-dependent methyltransferase compare
IAI47_14190 +0.4 0.8 DUF2171 domain-containing protein compare
IAI47_06030 +0.4 1.8 hypothetical protein compare
IAI47_17205 +0.4 0.9 PTS phosphocarrier protein NPr compare
IAI47_02790 +0.4 1.6 DUF4311 domain-containing protein compare
IAI47_07515 +0.4 1.3 hypothetical protein compare
IAI47_06965 +0.4 0.9 glycosyltransferase family 2 protein compare
IAI47_06020 +0.4 3.2 DUF2612 domain-containing protein compare
IAI47_05685 +0.4 2.5 hypothetical protein compare
IAI47_16990 +0.4 0.9 DEAD/DEAH family ATP-dependent RNA helicase compare
IAI47_10455 +0.4 1.2 electron transport complex subunit RsxC compare


Specific Phenotypes

For 10 genes in this experiment

For stress Potassium dichromate in Pantoea sp. MT58

For stress Potassium dichromate across organisms