Experiment set1IT071 for Caulobacter crescentus NA1000

Compare to:

L-Citrulline nitrogen source

200 most detrimental genes:

  gene name fitness t score description  
CCNA_01242 +9.8 81.7 amino acid permease compare
CCNA_R0048 +4.9 14.5 tRNA-Leu compare
CCNA_03604 +3.0 13.5 hypothetical protein compare
CCNA_00296 +2.4 11.6 phosphate regulon response regulator PhoB compare
CCNA_02132 +1.8 6.8 LacI-family transcriptional regulator compare
CCNA_03281 +1.7 14.7 AsnC-family transcriptional regulator compare
CCNA_02250 +1.7 3.4 methylcrotonyl-CoA carboxylase biotin-containing subunit compare
CCNA_01583 +1.6 2.8 phosphate-binding protein compare
CCNA_02252 +1.6 3.9 methylcrotonyl-CoA carboxylase carboxyl transferase subunit compare
CCNA_00517 +1.5 3.3 peptidyl-tRNA hydrolase compare
CCNA_02028 +1.5 2.4 NTF2 superfamily protein compare
CCNA_02646 +1.4 2.5 cell division protein MraZ compare
CCNA_00429 +1.3 2.6 hypothetical protein compare
CCNA_02534 +1.3 2.1 hypothetical protein compare
CCNA_03829 +1.2 2.4 hypothetical protein compare
CCNA_03944 +1.2 1.2 hypothetical protein compare
CCNA_01964 +1.2 2.4 NADH dehydrogenase compare
CCNA_00255 +1.2 2.3 esterase compare
CCNA_01526 +1.2 4.9 flagellar biosynthesis regulatory protein flaF compare
CCNA_03136 +1.2 3.4 flagellar export protein FliJ compare
CCNA_03811 +1.2 7.2 LysR-family transcriptional regulator compare
CCNA_00292 +1.1 2.5 phosphate transport system permease protein pstC compare
CCNA_01173 +1.1 5.3 chorismate mutase compare
CCNA_01195 +1.1 7.6 LacI-family transcriptional regulator compare
CCNA_01129 +1.1 4.2 flagellar biosynthesis protein FliQ compare
CCNA_03824 +1.1 4.8 2-polyprenylphenol 6-hydroxylase accessory protein UbiB compare
CCNA_02376 +1.0 1.6 hypothetical protein compare
CCNA_02004 +1.0 2.1 SOS-induced inhibitor of cell division SidA compare
CCNA_00684 +1.0 4.3 anti-sigma factor, ChrR-family compare
CCNA_00264 +1.0 4.8 C4-dicarboxylate transport protein compare
CCNA_01037 +1.0 6.4 GntR-family transcriptional regulator compare
CCNA_01505 +0.9 2.3 hypothetical protein compare
CCNA_03400 +0.9 1.4 hypothetical protein compare
CCNA_00027 +0.9 1.8 2OG-Fe(II) oxygenase compare
CCNA_02103 +0.9 3.3 hypothetical protein compare
CCNA_02416 +0.9 4.8 DNA-binding protein HU compare
CCNA_00731 +0.9 5.4 DNA mismatch repair protein mutL compare
CCNA_00028 +0.9 2.5 TonB-dependent receptor compare
CCNA_03635 +0.9 1.2 hypothetical protein compare
CCNA_00765 +0.9 3.5 hypothetical protein compare
CCNA_02217 +0.9 1.3 hypothetical protein compare
CCNA_01848 +0.9 5.2 quinol cytochrome oxidase polypeptide IV compare
CCNA_00964 +0.9 1.9 gluconate kinase compare
CCNA_00362 +0.9 3.0 zinc uptake regulation protein compare
CCNA_02138 +0.9 5.3 hypothetical protein compare
CCNA_00872 +0.9 3.5 glutaredoxin compare
CCNA_01780 +0.9 5.8 exopolyphosphatase compare
CCNA_02843 +0.9 2.9 toxin protein parE-3 compare
CCNA_03964 +0.8 2.5 hypothetical protein compare
CCNA_01849 +0.8 5.0 quinol cytochrome oxidase polypeptide III compare
CCNA_01716 +0.8 1.1 hypothetical protein compare
CCNA_01851 +0.8 6.4 quinol cytochrome oxidase polypeptide II compare
CCNA_02026 +0.8 1.4 hypothetical protein compare
CCNA_01823 +0.8 1.4 hypothetical protein compare
CCNA_03807 +0.8 4.6 organic solvent resistance transport system Ttg2D protein compare
CCNA_03135 +0.8 5.2 flagellum-specific ATP synthase fliL compare
CCNA_02926 +0.8 1.5 hypothetical protein compare
CCNA_02238 +0.8 2.2 hypothetical protein compare
CCNA_03762 +0.8 1.5 acetolactate synthase-related protein compare
CCNA_02631 +0.8 1.4 P-loop NTPase-related protein compare
CCNA_02619 +0.7 5.8 stomatin/prohibitin-related protein compare
CCNA_02467 +0.7 5.4 polyisoprenylphosphate hexose-1-phosphotransferase pssZ compare
CCNA_01272 +0.7 1.9 peptidyl-tRNA hydrolase family protein compare
CCNA_03078 +0.7 1.1 Arc/MetJ-family transcriptional regulator compare
CCNA_02737 +0.7 2.2 queuosine biosynthesis protein QueF compare
CCNA_03530 +0.7 2.0 hypothetical protein compare
CCNA_02012 +0.7 4.4 metal-dependent hydrolase compare
CCNA_01790 +0.7 2.7 protein translocase subunit secG compare
CCNA_01533 +0.7 3.3 hypothetical protein compare
CCNA_00012 +0.7 4.1 DNA mismatch repair protein MutS compare
CCNA_R0047 +0.7 1.1 tRNA-Val compare
CCNA_01405 +0.7 2.0 GIY-YIG domain protein compare
CCNA_03790 +0.7 2.7 hypothetical protein compare
CCNA_03353 +0.7 3.7 metallophosphatase domain protein compare
CCNA_03524 +0.7 2.6 di-/tripeptide transporter compare
CCNA_01850 +0.7 5.2 quinol cytochrome oxidase polypeptide I compare
CCNA_03849 +0.7 2.9 fructokinase compare
CCNA_02575 +0.7 2.6 hypothetical protein compare
CCNA_02345 +0.7 1.4 hypothetical protein compare
CCNA_02309 +0.7 2.3 EF hand domain protein compare
CCNA_02066 +0.7 2.9 phytoene/squalene synthase family protein compare
CCNA_02892 +0.7 1.3 hypothetical protein compare
CCNA_03740 +0.7 4.3 cysteine synthase compare
CCNA_02287 +0.7 4.2 TetR-family transcriptional regulator compare
CCNA_01289 +0.7 0.9 hypothetical protein compare
CCNA_01942 +0.7 2.9 Rrf2 family protein compare
CCNA_03590 +0.7 2.0 anti-sigma factor NepR compare
CCNA_01949 +0.7 2.6 bactofilin A BacA compare
CCNA_03810 +0.6 4.4 organic solvent resistance transport system ATP-binding protein compare
CCNA_00044 +0.6 2.0 ribosome maturation protein RimP compare
CCNA_01691 +0.6 3.2 tRNA/rRNA methyltransferase compare
CCNA_01939 +0.6 1.5 ADP-ribosylglycohydrolase compare
CCNA_00952 +0.6 3.7 flagellar assembly protein FlbE/FliH compare
CCNA_01220 +0.6 2.9 7-keto-8-aminopelargonate synthetase compare
CCNA_00953 +0.6 2.4 flagellar motor switch protein FliN compare
CCNA_03030 +0.6 3.0 cytochrome c2 compare
CCNA_03929 +0.6 1.1 hypothetical protein compare
CCNA_01712 +0.6 4.0 CopY/TcrY family transcriptional repressor compare
CCNA_03405 +0.6 1.9 rpsU-divergently transcribed protein compare
CCNA_02924 +0.6 1.3 hypothetical protein compare
CCNA_03319 +0.6 3.0 conserved hypothetical protein ImuA compare
CCNA_01730 +0.6 3.3 amidophosphoribosyltransferase compare
CCNA_01721 +0.6 2.5 RNA polymerase ECF sigma factor compare
CCNA_02303 +0.6 2.0 cation transport protein chaC compare
CCNA_02589 +0.6 1.2 BolA-related transcriptional regulator compare
CCNA_01437 +0.6 1.7 transglycosylase associated protein compare
CCNA_01804 +0.6 3.3 glutathione peroxidase compare
CCNA_02367 +0.6 4.1 CelR-family transcriptional regulator compare
CCNA_00047 +0.6 3.1 tRNA m7-G46 methyltransferase compare
CCNA_01375 +0.6 2.4 lactoylglutathione lyase compare
CCNA_03587 +0.6 2.3 entericidin B-like protein compare
CCNA_01722 +0.6 1.5 hypothetical protein compare
CCNA_01406 +0.6 3.0 metal-dependent hydrolase compare
CCNA_02151 +0.6 1.9 exodeoxyribonuclease VII small subunit compare
CCNA_03118 +0.6 1.5 hypothetical protein compare
CCNA_01414 +0.6 3.4 3-hydroxyisobutyryl-CoA hydrolase compare
CCNA_01074 +0.6 1.2 entericidin B-like protein compare
CCNA_02171 +0.6 4.2 nucleoside permease nupC compare
CCNA_01754 +0.6 1.3 transglycosylase associated protein compare
CCNA_03806 +0.6 4.0 outer membrane lipoprotein compare
CCNA_02040 +0.6 1.2 phosphoserine phosphatase compare
CCNA_01367 +0.6 2.6 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
CCNA_03918 +0.6 0.8 hypothetical protein compare
CCNA_03893 +0.6 1.7 hypothetical protein compare
CCNA_03809 +0.6 2.8 organic solvent resistance transport system permease compare
CCNA_01003 +0.6 2.6 flagellar biosynthesis protein FliO compare
CCNA_00950 +0.6 4.5 flagellar M-ring protein FliF compare
CCNA_03998 +0.6 3.8 GT1/WbuB-like N-acetyl-L-fucosamine transferase compare
CCNA_01086 +0.6 3.1 GTP-binding protein lepA compare
CCNA_02687 +0.6 2.9 serine-pyruvate aminotransferase compare
CCNA_01694 +0.6 3.1 CocE/NonD family hydrolase compare
CCNA_03832 +0.6 1.5 TetR-family transcriptional regulator compare
CCNA_00505 +0.6 2.0 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_00154 +0.6 2.4 hypothetical protein compare
CCNA_01931 +0.6 3.7 TetR-family transcriptional regulator compare
CCNA_02586 +0.6 2.9 phosphoribosylformylglycinamidine synthase II compare
CCNA_03062 +0.6 3.6 cell wall hydrolase family protein compare
CCNA_01006 +0.6 2.5 flagellar hook-basal body complex protein FliE compare
CCNA_03132 +0.6 2.6 transcriptional regulator, antitoxin protein higA compare
CCNA_03883 +0.6 1.8 hypothetical protein compare
CCNA_01793 +0.6 2.1 aspartate protease compare
CCNA_01801 +0.6 2.2 hypothetical protein compare
CCNA_01573 +0.5 2.9 ArsR-family transcriptional regulator compare
CCNA_00704 +0.5 1.0 hypothetical protein compare
CCNA_02021 +0.5 2.3 hypothetical protein compare
CCNA_02475 +0.5 3.4 transcriptional regulator vanR compare
CCNA_01002 +0.5 3.4 flagellar biosyntheis protein FliP compare
CCNA_02273 +0.5 2.3 glutathione peroxidase compare
CCNA_01237 +0.5 0.8 hypothetical protein compare
CCNA_02164 +0.5 1.6 glutamate dehydrogenase/leucine dehydrogenase compare
CCNA_03202 +0.5 3.8 lipid A 3-O-deacylase PagL compare
CCNA_00521 +0.5 1.4 antitoxin protein compare
CCNA_02842 +0.5 3.5 two-component sensor histidine kinase compare
CCNA_01775 +0.5 1.9 phosphoribosylformylglycinamidine cyclo-ligase compare
CCNA_00951 +0.5 3.4 flagellar motor switch protein FliG compare
CCNA_02055 +0.5 2.3 conserved hypothetical protein, YnfA/UPF0060 family compare
CCNA_03940 +0.5 1.3 hypothetical protein compare
CCNA_00774 +0.5 3.5 ring hydroxylating diooxygenase compare
CCNA_00551 +0.5 2.2 hypothetical protein compare
CCNA_03605 +0.5 2.3 hypothetical protein compare
CCNA_02841 +0.5 1.3 hypothetical protein compare
CCNA_01592 +0.5 1.8 SN-glycerol-3-phosphate transport ATP-binding protein compare
CCNA_02025 +0.5 2.4 hypothetical protein compare
CCNA_03100 +0.5 1.5 alkylphosphonate utilization operon protein PhnA compare
CCNA_02404 +0.5 2.8 ABC transporter ATP-binding protein compare
CCNA_02644 +0.5 1.4 cell division protein FtsL compare
CCNA_02141 +0.5 2.1 flagellar fliL protein compare
CCNA_02408 +0.5 2.3 hypothetical protein compare
CCNA_00147 +0.5 0.8 hypothetical protein compare
CCNA_R0054 +0.5 0.8 tRNA-Gly compare
CCNA_01057 +0.5 3.5 hypothetical protein compare
CCNA_02315 +0.5 1.2 Cro/CI-family transcriptional regulator compare
CCNA_01041 +0.5 1.3 hypothetical protein compare
CCNA_01341 +0.5 3.2 DegP/HtrA-family serine protease compare
CCNA_01435 +0.5 2.4 hypothetical protein compare
CCNA_02279 +0.5 1.1 disulfide bond formation protein B compare
CCNA_03163 +0.5 2.8 peptidyl-prolyl cis-trans isomerase compare
CCNA_01728 +0.5 2.4 short chain dehydrogenase compare
CCNA_03846 +0.5 1.4 hypothetical protein compare
CCNA_02845 +0.5 2.6 two-component response regulator compare
CCNA_01007 +0.5 1.4 hypothetical protein compare
CCNA_01619 +0.5 2.5 NYN domain protein compare
CCNA_01556 +0.5 0.8 LacI-family transcriptional regulator compare
CCNA_02067 +0.5 2.9 conserved membrane spanning protein compare
CCNA_02297 +0.5 2.0 hypoxanthine-guanine phosphoribosyltransferase compare
CCNA_01141 +0.5 2.8 RecA protein compare
CCNA_01025 +0.5 2.3 hypothetical protein compare
CCNA_01840 +0.5 3.4 MerR-family transcriptional regulator compare
CCNA_03997 +0.5 2.3 amelogenin/CpxP-related protein compare
CCNA_01107 +0.5 1.5 toxin protein parE-2 compare
CCNA_00732 +0.5 3.0 GumN superfamily protein compare
CCNA_02338 +0.5 3.2 hypothetical protein compare
CCNA_02324 +0.5 2.7 heat shock protein 33 hsp33 compare
CCNA_02555 +0.5 2.3 adenosine 5'-monophosphoramidase compare
CCNA_00518 +0.5 1.9 LSU ribosomal protein L25P compare
CCNA_01193 +0.5 3.6 amylosucrase compare
CCNA_03367 +0.5 2.2 chemotaxis receiver domain protein CheYIII compare
CCNA_03808 +0.5 2.8 organic solvent resistance transport system Ttg2C protein compare
CCNA_03620 +0.5 1.8 hypothetical protein compare
CCNA_00770 +0.5 2.2 TetR family transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Caulobacter crescentus NA1000 in nitrogen source experiments

For nitrogen source L-Citrulline across organisms