Experiment set1IT070 for Pantoea sp. MT58

Compare to:

Potassium dichromate 5 uM, aerobic

200 most important genes:

  gene name fitness t score description  
IAI47_16015 -6.1 -4.2 3-isopropylmalate dehydratase small subunit compare
IAI47_15635 -5.7 -5.5 RNA polymerase-binding protein DksA compare
IAI47_17220 -5.5 -27.1 glutamate synthase large subunit compare
IAI47_05275 -5.4 -6.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
IAI47_18015 -5.3 -16.0 homoserine O-succinyltransferase compare
IAI47_09185 -5.3 -5.1 glutamine amidotransferase compare
IAI47_17225 -5.2 -21.3 sulfite reductase subunit alpha compare
IAI47_13050 -5.1 -5.0 YbjN domain-containing protein compare
IAI47_00905 -5.1 -16.9 N-acetyl-gamma-glutamyl-phosphate reductase compare
IAI47_09175 -5.1 -10.3 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
IAI47_07085 -4.9 -15.9 histidinol-phosphate transaminase compare
IAI47_00880 -4.9 -17.7 cystathionine gamma-synthase compare
IAI47_15605 -4.9 -3.4 Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC compare
IAI47_07090 -4.9 -12.7 histidinol dehydrogenase compare
IAI47_09190 -4.9 -10.9 anthranilate synthase component 1 compare
IAI47_16205 -4.8 -11.3 threonine synthase compare
IAI47_07060 -4.8 -14.0 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
IAI47_04155 -4.8 -15.4 assimilatory sulfite reductase (NADPH) hemoprotein subunit compare
IAI47_09165 -4.8 -5.7 tryptophan synthase subunit alpha compare
IAI47_09180 -4.7 -11.8 anthranilate phosphoribosyltransferase compare
IAI47_05440 -4.7 -14.2 cysteine synthase A compare
IAI47_04190 -4.7 -10.5 adenylyl-sulfate kinase compare
IAI47_07080 -4.7 -10.9 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
IAI47_04180 -4.7 -15.8 sulfate adenylyltransferase subunit CysD compare
IAI47_00900 -4.7 -18.1 acetylornithine deacetylase compare
IAI47_04150 -4.6 -17.2 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit compare
IAI47_07065 -4.6 -13.6 imidazole glycerol phosphate synthase subunit HisF compare
IAI47_16830 -4.6 -18.4 ornithine carbamoyltransferase compare
IAI47_04175 -4.6 -13.8 uroporphyrinogen-III C-methyltransferase compare
IAI47_16005 -4.6 -13.5 3-isopropylmalate dehydrogenase compare
IAI47_00895 -4.5 -23.3 phosphoenolpyruvate carboxylase compare
IAI47_01035 -4.5 -23.4 dihydroxy-acid dehydratase compare
IAI47_06235 -4.5 -10.4 4-phosphoerythronate dehydrogenase PdxB compare
IAI47_16010 -4.5 -18.9 3-isopropylmalate dehydratase large subunit compare
IAI47_09170 -4.4 -11.1 tryptophan synthase subunit beta compare
IAI47_16115 -4.4 -23.9 carbamoyl-phosphate synthase large subunit compare
IAI47_03975 -4.4 -18.5 amino-acid N-acetyltransferase compare
IAI47_03860 -4.4 -16.5 diaminopimelate decarboxylase compare
IAI47_00915 -4.4 -17.8 argininosuccinate synthase compare
IAI47_16215 -4.4 -21.4 bifunctional aspartate kinase/homoserine dehydrogenase I compare
IAI47_16000 -4.4 -22.0 2-isopropylmalate synthase compare
IAI47_01050 -4.3 -22.0 ketol-acid reductoisomerase compare
IAI47_13770 -4.3 -10.9 citrate synthase compare
IAI47_05405 -4.3 -10.5 cysteine synthase CysM compare
IAI47_01030 -4.3 -18.9 branched-chain amino acid transaminase compare
IAI47_04895 -4.3 -5.9 pyridoxine 5'-phosphate synthase compare
IAI47_16080 -4.3 -11.4 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
IAI47_16210 -4.3 -15.7 homoserine kinase compare
IAI47_14350 -4.3 -9.1 5-(carboxyamino)imidazole ribonucleotide mutase compare
IAI47_10520 -4.2 -4.1 pyridoxamine 5'-phosphate oxidase compare
IAI47_16350 -4.2 -12.8 phosphoserine phosphatase compare
IAI47_13685 -4.2 -3.3 Tol-Pal system protein TolB compare
IAI47_18040 -4.2 -21.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
IAI47_07095 -4.2 -12.9 ATP phosphoribosyltransferase compare
IAI47_04185 -4.2 -20.1 sulfate adenylyltransferase subunit CysN compare
IAI47_00920 -4.2 -19.6 argininosuccinate lyase compare
IAI47_13745 -4.1 -2.8 2-oxoglutarate dehydrogenase E1 component compare
IAI47_07075 -4.1 -11.5 imidazole glycerol phosphate synthase subunit HisH compare
IAI47_12865 -4.1 -11.5 3-phosphoserine/phosphohydroxythreonine transaminase compare
IAI47_16120 -4.1 -13.1 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
IAI47_12915 -4.1 -11.7 leucine-responsive transcriptional regulator Lrp compare
IAI47_04930 -4.0 -22.6 phosphoribosylformylglycinamidine synthase compare
IAI47_07070 -4.0 -9.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
IAI47_06275 -4.0 -20.2 amidophosphoribosyltransferase compare
IAI47_03725 -4.0 -13.2 phosphoglycerate dehydrogenase compare
IAI47_00785 -4.0 -21.0 sulfate ABC transporter substrate-binding protein compare
IAI47_14355 -4.0 -13.6 5-(carboxyamino)imidazole ribonucleotide synthase compare
IAI47_05180 -3.9 -16.6 phosphoribosylformylglycinamidine cyclo-ligase compare
IAI47_07010 -3.9 -3.9 ABC transporter permease compare
IAI47_03820 -3.9 -4.6 site-specific tyrosine recombinase XerD compare
IAI47_00780 -3.9 -6.4 6-phosphofructokinase compare
IAI47_01040 -3.8 -14.0 threonine ammonia-lyase, biosynthetic compare
IAI47_17185 -3.8 -4.5 RNA polymerase factor sigma-54 compare
IAI47_15595 -3.8 -2.6 Fe(3+)-hydroxamate ABC transporter permease FhuB compare
IAI47_12215 -3.7 -13.3 dihydroorotase compare
IAI47_05420 -3.7 -2.5 PTS glucose transporter subunit IIA compare
IAI47_00910 -3.7 -12.8 acetylglutamate kinase compare
IAI47_13900 -3.7 -19.6 asparagine synthase B compare
IAI47_05465 -3.7 -7.8 bile acid:sodium symporter compare
IAI47_05070 -3.7 -1.5 outer membrane protein assembly factor BamB compare
IAI47_15810 -3.7 -3.6 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
IAI47_13695 -3.6 -1.4 colicin uptake protein TolR compare
IAI47_06135 -3.6 -4.9 phosphohistidine phosphatase SixA compare
IAI47_04160 -3.6 -13.7 phosphoadenylyl-sulfate reductase compare
IAI47_00455 -3.5 -13.1 nitrogen regulation protein NR(II) compare
IAI47_16870 -3.5 -8.2 2-iminobutanoate/2-iminopropanoate deaminase compare
IAI47_07475 -3.4 -1.9 hypothetical protein compare
IAI47_02695 -3.4 -14.3 3'(2'),5'-bisphosphate nucleotidase CysQ compare
IAI47_18045 -3.4 -13.3 phosphoribosylamine--glycine ligase compare
IAI47_11760 -3.3 -2.3 TonB-dependent siderophore receptor compare
IAI47_15115 -3.3 -12.4 glutamate-5-semialdehyde dehydrogenase compare
IAI47_01955 -3.3 -14.1 aspartate aminotransferase family protein compare
IAI47_14945 -3.3 -4.4 pyrroline-5-carboxylate reductase compare
IAI47_21690 -3.2 -12.2 TetR/AcrR family transcriptional regulator compare
IAI47_12705 -3.2 -12.8 quinone-dependent dihydroorotate dehydrogenase compare
IAI47_06245 -3.1 -5.6 tRNA pseudouridine(38-40) synthase TruA compare
IAI47_15600 -3.1 -3.3 Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD compare
IAI47_00655 -3.1 -6.8 glycosyltransferase family 4 protein compare
IAI47_04410 -3.1 -13.1 bifunctional chorismate mutase/prephenate dehydratase compare
IAI47_10835 -3.1 -1.7 tRNA-Val compare
IAI47_16860 -3.0 -15.3 aspartate carbamoyltransferase compare
IAI47_04300 -3.0 -8.6 recombinase RecA compare
IAI47_18830 -3.0 -2.0 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
IAI47_09275 -3.0 -8.3 orotidine-5'-phosphate decarboxylase compare
IAI47_08445 -3.0 -2.0 Holliday junction branch migration protein RuvA compare
IAI47_03855 -3.0 -9.6 LysR family transcriptional regulator compare
IAI47_00600 -3.0 -10.6 orotate phosphoribosyltransferase compare
IAI47_15120 -2.9 -9.2 glutamate 5-kinase compare
IAI47_09010 -2.9 -8.6 formyltetrahydrofolate deformylase compare
IAI47_15970 -2.9 -3.4 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
IAI47_08085 -2.8 -7.0 helix-turn-helix domain-containing protein compare
IAI47_13180 -2.8 -7.7 manganese-binding transcriptional regulator MntR compare
IAI47_09040 -2.8 -2.0 NAD-dependent epimerase compare
IAI47_00450 -2.7 -12.1 nitrogen regulation protein NR(I) compare
IAI47_13290 -2.6 -11.8 DNA-binding protein YbiB compare
IAI47_09245 -2.6 -6.6 YmiA family putative membrane protein compare
IAI47_00875 -2.6 -2.0 met regulon transcriptional regulator MetJ compare
IAI47_09240 -2.6 -3.0 HTH-type transcriptional regulator CysB compare
IAI47_18400 -2.5 -3.4 tyrosine recombinase XerC compare
IAI47_05520 -2.5 -1.6 tRNA-Ala compare
IAI47_00460 -2.5 -1.7 glutamate--ammonia ligase compare
IAI47_17020 -2.5 -5.0 30S ribosome-binding factor RbfA compare
IAI47_05525 -2.5 -1.8 tRNA-Ala compare
IAI47_04120 -2.5 -15.2 GTP diphosphokinase compare
IAI47_13740 -2.5 -2.2 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
IAI47_11475 -2.4 -1.9 hypothetical protein compare
IAI47_04400 -2.4 -7.0 3-deoxy-7-phosphoheptulonate synthase compare
IAI47_17965 -2.4 -12.9 glucose-6-phosphate isomerase compare
IAI47_02090 -2.2 -4.6 elongation factor Tu compare
IAI47_00760 -2.2 -4.7 envelope stress response regulator transcription factor CpxR compare
IAI47_01365 -2.2 -1.5 inorganic phosphate transporter PitA compare
IAI47_07015 -2.2 -7.9 ABC transporter ATP-binding protein compare
IAI47_08450 -2.2 -4.8 Holliday junction branch migration DNA helicase RuvB compare
IAI47_18530 -2.2 -2.7 thioredoxin TrxA compare
IAI47_02350 -2.1 -1.5 tRNA-Thr compare
IAI47_07165 -2.1 -2.9 exodeoxyribonuclease I compare
IAI47_03685 -2.1 -9.4 erythrose-4-phosphate dehydrogenase compare
IAI47_17000 -2.0 -10.1 lipoprotein NlpI compare
IAI47_06395 -1.9 -1.8 NADH-quinone oxidoreductase subunit NuoI compare
IAI47_11310 -1.8 -4.6 redox-regulated ATPase YchF compare
IAI47_12645 -1.8 -4.5 porin OmpA compare
IAI47_03610 -1.8 -4.7 YqgE/AlgH family protein compare
IAI47_17035 -1.8 -2.9 ribosome maturation factor RimP compare
IAI47_04870 -1.7 -6.3 elongation factor 4 compare
IAI47_12175 -1.7 -3.9 anti-sigma-28 factor FlgM compare
IAI47_11450 -1.7 -5.7 ankyrin repeat domain-containing protein compare
IAI47_09305 -1.7 -3.6 cyclic di-GMP phosphodiesterase compare
IAI47_04335 -1.6 -2.7 tRNA-Arg compare
IAI47_11830 -1.6 -6.1 muramoyltetrapeptide carboxypeptidase compare
IAI47_05150 -1.6 -6.6 exopolyphosphatase compare
IAI47_06680 -1.5 -5.2 LysR family transcriptional regulator compare
IAI47_09350 -1.5 -6.9 oxidoreductase compare
IAI47_08440 -1.5 -2.0 crossover junction endodeoxyribonuclease RuvC compare
IAI47_06115 -1.5 -10.8 long-chain fatty acid transporter FadL compare
IAI47_10925 -1.5 -3.0 EAL domain-containing protein compare
IAI47_05425 -1.5 -4.0 phosphoenolpyruvate-protein phosphotransferase PtsI compare
IAI47_12920 -1.5 -3.3 thioredoxin-disulfide reductase compare
IAI47_18520 -1.5 -11.7 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
IAI47_21035 -1.5 -2.5 TetR/AcrR family transcriptional regulator compare
IAI47_16390 -1.5 -0.8 tRNA-Leu compare
IAI47_08705 -1.4 -9.7 carboxy terminal-processing peptidase compare
IAI47_18410 -1.4 -3.5 diaminopimelate epimerase compare
IAI47_14775 -1.4 -2.5 transcriptional regulator NrdR compare
IAI47_14695 -1.4 -3.8 cytochrome o ubiquinol oxidase subunit IV compare
IAI47_13690 -1.3 -0.9 cell envelope integrity protein TolA compare
IAI47_06240 -1.3 -5.7 aspartate-semialdehyde dehydrogenase compare
IAI47_11515 -1.3 -1.1 hypothetical protein compare
IAI47_03595 -1.3 -3.4 YggS family pyridoxal phosphate-dependent enzyme compare
IAI47_03680 -1.3 -7.8 transketolase compare
IAI47_18240 -1.3 -2.7 NAD(P)H-flavin reductase compare
IAI47_14555 -1.3 -4.4 hemolysin expression modulator Hha compare
IAI47_17120 -1.3 -2.5 BolA family iron metabolism protein IbaG compare
IAI47_15540 -1.2 -6.4 bifunctional uridylyltransferase/uridylyl-removing protein GlnD compare
IAI47_03375 -1.2 -6.3 peptide chain release factor 3 compare
IAI47_21665 -1.2 -1.7 DUF333 domain-containing protein compare
IAI47_01135 -1.2 -0.8 hypothetical protein compare
IAI47_01100 -1.2 -7.7 malate dehydrogenase (quinone) compare
IAI47_18540 -1.2 -3.5 guanosine-5'-triphosphate,3'-diphosphate diphosphatase compare
IAI47_12085 -1.1 -5.5 phosphate acyltransferase PlsX compare
IAI47_06055 -1.1 -3.1 tRNA-Arg compare
IAI47_08355 -1.1 -3.2 flagellar protein FlhE compare
IAI47_18315 -1.1 -3.7 HTH-type transcriptional regulator MetR compare
IAI47_05035 -1.1 -1.8 nucleoside-diphosphate kinase compare
IAI47_07020 -1.1 -1.4 hypothetical protein compare
IAI47_00300 -1.1 -0.9 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
IAI47_13635 -1.0 -5.4 quinolinate synthase NadA compare
IAI47_05155 -1.0 -7.8 polyphosphate kinase 1 compare
IAI47_13950 -1.0 -1.2 PhoH family protein compare
IAI47_10775 -1.0 -3.3 ribonuclease T compare
IAI47_01000 -1.0 -7.2 HTH-type transcriptional regulator HdfR compare
IAI47_17580 -1.0 -5.1 hypothetical protein compare
IAI47_04835 -1.0 -4.6 ATP-dependent RNA helicase SrmB compare
IAI47_21310 -1.0 -6.1 helix-turn-helix domain-containing protein compare
IAI47_21390 -1.0 -3.3 hypothetical protein compare
IAI47_01765 -1.0 -5.4 DeoR/GlpR family transcriptional regulator compare
IAI47_13935 -1.0 -1.2 tRNA-Gln compare
IAI47_12180 -1.0 -3.5 flagellar export chaperone FlgN compare
IAI47_11540 -1.0 -2.3 type VI secretion system tip protein VgrG compare
IAI47_17255 -1.0 -1.8 DUF1043 family protein compare
IAI47_12280 -1.0 -6.5 glucan biosynthesis protein G compare


Specific Phenotypes

For 13 genes in this experiment

For stress Potassium dichromate in Pantoea sp. MT58

For stress Potassium dichromate across organisms