Experiment set1IT069 for Caulobacter crescentus NA1000

Compare to:

L-Phenylalanine nitrogen source

200 most detrimental genes:

  gene name fitness t score description  
CCNA_03281 +10.3 58.1 AsnC-family transcriptional regulator compare
CCNA_01242 +7.5 58.0 amino acid permease compare
CCNA_03280 +3.9 31.1 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_01059 +3.5 28.4 S-layer protein rsaA compare
CCNA_02591 +3.0 8.7 glutaredoxin compare
CCNA_02957 +2.8 6.7 ArsR-family transcriptional regulator compare
CCNA_00389 +2.7 5.3 aminomethyltransferase family protein compare
CCNA_02103 +2.7 6.7 hypothetical protein compare
CCNA_02132 +2.7 9.6 LacI-family transcriptional regulator compare
CCNA_01851 +2.7 19.6 quinol cytochrome oxidase polypeptide II compare
CCNA_01712 +2.6 19.9 CopY/TcrY family transcriptional repressor compare
CCNA_03989 +2.6 19.3 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_01848 +2.6 13.7 quinol cytochrome oxidase polypeptide IV compare
CCNA_01849 +2.6 14.5 quinol cytochrome oxidase polypeptide III compare
CCNA_02026 +2.5 6.4 hypothetical protein compare
CCNA_03064 +2.4 12.5 PadR-family transcriptional regulator compare
CCNA_01850 +2.4 18.1 quinol cytochrome oxidase polypeptide I compare
CCNA_00028 +2.4 3.9 TonB-dependent receptor compare
CCNA_03287 +2.4 13.8 PadR-family transcriptional regulator compare
CCNA_01057 +2.3 13.5 hypothetical protein compare
CCNA_01060 +2.3 7.6 type I protein secretion ATP-binding protein RsaD compare
CCNA_03400 +2.3 3.0 hypothetical protein compare
CCNA_01526 +2.3 9.1 flagellar biosynthesis regulatory protein flaF compare
CCNA_03612 +2.2 8.5 HTH XRE-family transcriptional regulator compare
CCNA_03030 +2.2 11.7 cytochrome c2 compare
CCNA_01801 +2.2 11.5 hypothetical protein compare
CCNA_00756 +2.2 4.1 hypothetical protein compare
CCNA_02021 +2.2 7.9 hypothetical protein compare
CCNA_02980 +2.2 15.6 tryptophan 2,3-dioxygenase compare
CCNA_01840 +2.2 15.3 MerR-family transcriptional regulator compare
CCNA_00699 +2.2 6.4 LSU ribosomal protein L28P compare
CCNA_01942 +2.2 10.4 Rrf2 family protein compare
CCNA_01751 +2.1 6.8 aminodeoxychorismate lyase compare
CCNA_02576 +2.1 13.7 phosphoribosylamidoimidazole-succinocarboxamide synthase compare
CCNA_02250 +2.1 3.8 methylcrotonyl-CoA carboxylase biotin-containing subunit compare
CCNA_00161 +2.1 12.7 hypothetical protein compare
CCNA_01094 +2.1 4.6 hypothetical protein compare
CCNA_01790 +2.1 8.4 protein translocase subunit secG compare
CCNA_03325 +2.1 7.7 hypothetical protein compare
CCNA_03824 +2.1 12.1 2-polyprenylphenol 6-hydroxylase accessory protein UbiB compare
CCNA_01931 +2.1 11.5 TetR-family transcriptional regulator compare
CCNA_02025 +2.1 4.6 hypothetical protein compare
CCNA_03252 +2.0 16.1 CopY/TcrY-family transcriptional regulator compare
CCNA_01074 +2.0 7.2 entericidin B-like protein compare
CCNA_00505 +2.0 10.1 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_02000 +2.0 3.0 SSU ribosomal protein S2P compare
CCNA_00162 +2.0 8.3 hypothetical protein compare
CCNA_00518 +2.0 11.1 LSU ribosomal protein L25P compare
CCNA_03519 +2.0 9.4 PadR-family transcriptional regulator compare
CCNA_03479 +1.9 10.3 MarR-family transcriptional regulator compare
CCNA_00846 +1.9 16.9 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_03951 +1.9 6.2 hypothetical protein compare
CCNA_03893 +1.9 5.2 hypothetical protein compare
CCNA_R0047 +1.9 2.3 tRNA-Val compare
CCNA_03123 +1.9 13.1 ArsR-family transcriptional regulator compare
CCNA_02028 +1.9 2.6 NTF2 superfamily protein compare
CCNA_01954 +1.9 3.7 ribonuclease E compare
CCNA_01979 +1.9 5.1 LexA repressor compare
CCNA_R0054 +1.9 2.7 tRNA-Gly compare
CCNA_02066 +1.9 6.3 phytoene/squalene synthase family protein compare
CCNA_02368 +1.9 14.3 alpha-glucosidase compare
CCNA_00684 +1.9 5.6 anti-sigma factor, ChrR-family compare
CCNA_01802 +1.9 6.2 hypothetical protein compare
CCNA_00264 +1.9 11.6 C4-dicarboxylate transport protein compare
CCNA_02367 +1.8 12.1 CelR-family transcriptional regulator compare
CCNA_02732 +1.8 5.2 hypothetical protein compare
CCNA_02447 +1.8 12.5 PspA/IM30 family regulatory protein compare
CCNA_01361 +1.8 3.9 PepSY superfamily protein compare
CCNA_01001 +1.8 9.0 ribokinase compare
CCNA_02448 +1.8 12.0 hypothetical protein compare
CCNA_01608 +1.8 8.2 TetR-family transcriptional regulator compare
CCNA_R0026 +1.8 2.9 tRNA-Gly compare
CCNA_03271 +1.8 12.8 methionine gamma-lyase compare
CCNA_02030 +1.8 7.1 hypothetical protein compare
CCNA_R0037 +1.8 6.6 tRNA-Glu compare
CCNA_03043 +1.8 6.8 type IV pilin protein pilA compare
CCNA_02151 +1.8 4.9 exodeoxyribonuclease VII small subunit compare
CCNA_01913 +1.7 10.9 MarR-family transcriptional regulator compare
CCNA_00072 +1.7 11.0 hypothetical protein compare
CCNA_03689 +1.7 12.4 alanine dehydrogenase compare
CCNA_00705 +1.7 5.6 hypothetical protein compare
CCNA_01011 +1.7 8.0 imidazolonepropionase compare
CCNA_00930 +1.7 11.8 riboflavin synthase alpha chain compare
CCNA_03379 +1.7 4.0 Cro/CI family transcriptional regulator compare
CCNA_01596 +1.7 6.7 DNA helicase II compare
CCNA_01728 +1.7 9.5 short chain dehydrogenase compare
CCNA_00998 +1.7 8.6 ROS/MUCR transcriptional regulator compare
CCNA_01681 +1.7 7.3 RimI-like acetyltransferase compare
CCNA_00032 +1.7 6.0 antitoxin protein VapB compare
CCNA_00929 +1.7 11.2 Riboflavin-specific deaminase family protein compare
CCNA_00807 +1.7 2.7 ribonuclease P protein component compare
CCNA_02004 +1.7 3.2 SOS-induced inhibitor of cell division SidA compare
CCNA_01573 +1.7 8.7 ArsR-family transcriptional regulator compare
CCNA_03762 +1.7 5.3 acetolactate synthase-related protein compare
CCNA_01722 +1.7 4.1 hypothetical protein compare
CCNA_02843 +1.7 4.2 toxin protein parE-3 compare
CCNA_01655 +1.7 7.8 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_00527 +1.7 9.9 hypothetical protein compare
CCNA_00044 +1.7 4.3 ribosome maturation protein RimP compare
CCNA_02619 +1.7 13.0 stomatin/prohibitin-related protein compare
CCNA_00675 +1.7 5.5 VapC-like PIN domain ribonuclease compare
CCNA_01505 +1.7 4.1 hypothetical protein compare
CCNA_01583 +1.7 2.8 phosphate-binding protein compare
CCNA_00939 +1.7 7.0 MarR-family transcriptional regulator compare
CCNA_00517 +1.7 1.8 peptidyl-tRNA hydrolase compare
CCNA_02289 +1.7 9.2 MarR/EmrR family transcriptional regulator compare
CCNA_00027 +1.6 4.1 2OG-Fe(II) oxygenase compare
CCNA_02164 +1.6 4.8 glutamate dehydrogenase/leucine dehydrogenase compare
CCNA_02575 +1.6 6.4 hypothetical protein compare
CCNA_01405 +1.6 4.1 GIY-YIG domain protein compare
CCNA_01752 +1.6 8.2 YicC-family protein compare
CCNA_02073 +1.6 5.9 cupin domain transcriptional regulator compare
CCNA_02728 +1.6 9.1 hypothetical protein compare
CCNA_01061 +1.6 5.6 type I secretion adaptor protein RsaE compare
CCNA_01406 +1.6 7.2 metal-dependent hydrolase compare
CCNA_02976 +1.6 8.6 MCP-signal associated domain protein compare
CCNA_00895 +1.6 6.8 hypothetical protein compare
CCNA_03961 +1.6 6.5 hypothetical protein compare
CCNA_03514 +1.6 7.9 cytochrome c oxidase assembly protein ctaG compare
CCNA_00429 +1.6 2.6 hypothetical protein compare
CCNA_01804 +1.6 8.6 glutathione peroxidase compare
CCNA_00931 +1.6 11.3 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase compare
CCNA_01847 +1.6 11.2 cytochrome c oxidase assembly protein Surf1 compare
CCNA_03108 +1.6 12.3 TonB-dependent outer membrane receptor compare
CCNA_02287 +1.6 9.0 TetR-family transcriptional regulator compare
CCNA_02475 +1.6 11.5 transcriptional regulator vanR compare
CCNA_00438 +1.6 4.8 hypothetical protein compare
CCNA_02010 +1.6 2.8 hypothetical protein compare
CCNA_01742 +1.6 7.9 hypothetical protein compare
CCNA_00441 +1.6 7.8 chemotaxis receiver domain protein cheYI compare
CCNA_01926 +1.6 8.1 GGDEF diguanylate cyclase DgcB compare
CCNA_01593 +1.6 8.9 Xaa-pro aminopeptidase compare
CCNA_03524 +1.6 7.3 di-/tripeptide transporter compare
CCNA_03832 +1.6 7.7 TetR-family transcriptional regulator compare
CCNA_01541 +1.6 10.8 LysR-family transcriptional regulator compare
CCNA_02805 +1.6 8.3 hypothetical protein compare
CCNA_03688 +1.6 7.2 AsnC-family transcriptional regulator compare
CCNA_00945 +1.6 8.0 chemotaxis protein MotD compare
CCNA_01453 +1.6 3.7 electron transport complex I subunit, NADH-ubiquinone oxidoreductase compare
CCNA_02338 +1.5 7.9 hypothetical protein compare
CCNA_00073 +1.5 11.4 HemY domain membrane protein compare
CCNA_01528 +1.5 9.2 flagellin fljK compare
CCNA_03807 +1.5 7.1 organic solvent resistance transport system Ttg2D protein compare
CCNA_02534 +1.5 2.4 hypothetical protein compare
CCNA_03740 +1.5 8.3 cysteine synthase compare
CCNA_03062 +1.5 9.3 cell wall hydrolase family protein compare
CCNA_00947 +1.5 11.2 flagellar hook protein FlgE compare
CCNA_01690 +1.5 4.7 MAPEG family membrane protein compare
CCNA_02330 +1.5 6.7 hypothetical protein compare
CCNA_00781 +1.5 11.7 two-component receiver protein CpdR compare
CCNA_01193 +1.5 11.1 amylosucrase compare
CCNA_01020 +1.5 9.2 LacI-family transcriptional regulator compare
CCNA_03129 +1.5 9.3 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_01679 +1.5 9.1 succinylglutamic semialdehyde dehydrogenase compare
CCNA_03215 +1.5 9.4 ARO8 family aminotransferase/HTH DNA-binding protein compare
CCNA_01525 +1.5 6.9 flagellar biosynthesis repressor flbT compare
CCNA_03622 +1.5 8.2 beta-lactamase repressor compare
CCNA_03806 +1.5 9.2 outer membrane lipoprotein compare
CCNA_00031 +1.5 7.8 toxin protein VapC compare
CCNA_03863 +1.5 5.3 hypothetical protein compare
CCNA_02339 +1.5 9.0 methyltransferase compare
CCNA_03604 +1.5 6.6 hypothetical protein compare
CCNA_03420 +1.5 9.3 hypothetical protein compare
CCNA_02324 +1.5 8.2 heat shock protein 33 hsp33 compare
CCNA_03352 +1.5 7.5 YebC/PmpR transcriptional regulator compare
CCNA_01008 +1.5 10.7 urocanate hydratase compare
CCNA_03214 +1.5 7.7 hypothetical protein compare
CCNA_00447 +1.5 6.4 chemotaxis protein cheD compare
CCNA_01102 +1.5 6.5 hypothetical protein compare
CCNA_00885 +1.5 8.0 MazE-like antitoxin protein compare
CCNA_01220 +1.5 6.5 7-keto-8-aminopelargonate synthetase compare
CCNA_03808 +1.4 7.0 organic solvent resistance transport system Ttg2C protein compare
CCNA_00448 +1.4 8.9 cheU protein compare
CCNA_03371 +1.4 6.6 bacterioferritin compare
CCNA_02273 +1.4 5.2 glutathione peroxidase compare
CCNA_01619 +1.4 6.3 NYN domain protein compare
CCNA_03496 +1.4 6.7 hypothetical protein compare
CCNA_00163 +1.4 9.3 exopolysaccharide transport family protein compare
CCNA_02379 +1.4 8.5 hypothetical protein compare
CCNA_00168 +1.4 9.5 polysaccharide export protein compare
CCNA_00803 +1.4 6.2 chemotaxis protein cheW compare
CCNA_01393 +1.4 10.4 soluble lytic murein transglycosylase compare
CCNA_01968 +1.4 3.9 pentapeptide repeats containing protein compare
CCNA_03464 +1.4 4.6 glycine cleavage system H protein compare
CCNA_00834 +1.4 6.4 flagellin FljM compare
CCNA_01181 +1.4 6.8 hypothetical protein compare
CCNA_01184 +1.4 8.0 MutT/nudix family hydrolase compare
CCNA_00847 +1.4 6.6 leucine-responsive regulatory protein compare
CCNA_00107 +1.4 3.7 Trm112p-like protein compare
CCNA_00920 +1.4 3.2 hypothetical protein compare
CCNA_01680 +1.4 6.7 succinylarginine dihydrolase compare
CCNA_03260 +1.4 4.9 queuosine biosynthesis protein QueD compare
CCNA_02416 +1.4 6.8 DNA-binding protein HU compare
CCNA_03805 +1.4 9.0 PadR-family transcriptional regulator compare
CCNA_01186 +1.4 6.9 hypothetical protein compare
CCNA_03369 +1.4 6.7 hypothetical protein compare
CCNA_03012 +1.4 7.8 peroxiredoxin compare
CCNA_02081 +1.4 3.5 Sec-independent protein translocase protein tatB compare
CCNA_02180 +1.4 1.8 iron-sulfur cluster assembly/repair protein ApbC compare
CCNA_01731 +1.3 4.8 colicin V production protein CvpA compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source L-Phenylalanine in Caulobacter crescentus NA1000

For nitrogen source L-Phenylalanine across organisms