Experiment set1IT067 for Pedobacter sp. GW460-11-11-14-LB5
R2A with Sodium Chloride 300 mM
Group: stressMedia: R2A + Sodium Chloride (300 mM)
Culturing: Pedo557_ML3, 24-well transparent microplate; Multitron, Aerobic, at 30 (C), shaken=700 rpm
Growth: about 4.8 generations
By: Adam on 17-May-17
Media components: 0.5 g/L Bacto Peptone, 0.5 g/L casamino acids, 0.5 g/L Yeast Extract, 0.5 g/L D-Glucose, 0.5 g/L Starch, 0.3 g/L Potassium phosphate dibasic, 0.05 g/L Magnesium Sulfate Heptahydrate, 0.3 g/L Sodium pyruvate
Growth plate: 1756 D5
Specific Phenotypes
For 6 genes in this experiment
For stress Sodium Chloride in Pedobacter sp. GW460-11-11-14-LB5
For stress Sodium Chloride across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Trehalose Biosynthesis | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| trehalose biosynthesis I | 2 | 2 | 2 |
| trehalose biosynthesis III | 2 | 1 | 1 |
| trehalose biosynthesis II | 2 | 1 | 1 |
| glycogen biosynthesis III (from α-maltose 1-phosphate) | 8 | 3 | 1 |
| mycolate biosynthesis | 205 | 26 | 5 |
| superpathway of mycolate biosynthesis | 239 | 27 | 5 |