Experiment set1IT065 for Bifidobacterium breve UCC2003
reconstituted MRS with D-Ribose 67 mM
Group: carbon sourceMedia: reconstituted MRS + D-Ribose (67 mM), pH=6.8
Culturing: Bifido_ML2, 96 deep-well microplate; 1.2 mL volume, Anaerobic, at 37 (C), shaken=0 rpm
By: Anthony Shiver on 5/20/2019
Specific Phenotypes
For 4 genes in this experiment
For carbon source D-Ribose in Bifidobacterium breve UCC2003
For carbon source D-Ribose across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| D-ribose utilization | 4 |
| Deoxyribose and Deoxynucleoside Catabolism | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Pentose phosphate pathway
- Pentose and glucuronate interconversions
- Biosynthesis of steroids
- Lipopolysaccharide biosynthesis
- Carotenoid biosynthesis - General
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| ribose phosphorylation | 2 | 1 | 1 |
| 2-deoxy-D-ribose degradation I | 3 | 2 | 1 |