Experiment set1IT064 for Pantoea sp. MT58

Compare to:

Nickel (II) chloride hexahydrate 40 uM, aerobic

200 most important genes:

  gene name fitness t score description  
IAI47_17225 -6.2 -18.0 sulfite reductase subunit alpha compare
IAI47_07060 -6.2 -9.5 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
IAI47_07070 -6.0 -7.2 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
IAI47_17220 -5.9 -28.3 glutamate synthase large subunit compare
IAI47_07085 -5.7 -16.0 histidinol-phosphate transaminase compare
IAI47_06235 -5.6 -8.5 4-phosphoerythronate dehydrogenase PdxB compare
IAI47_07065 -5.6 -12.4 imidazole glycerol phosphate synthase subunit HisF compare
IAI47_05275 -5.5 -8.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
IAI47_04190 -5.4 -11.0 adenylyl-sulfate kinase compare
IAI47_03725 -5.3 -12.9 phosphoglycerate dehydrogenase compare
IAI47_07080 -5.3 -11.2 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
IAI47_16350 -5.2 -12.7 phosphoserine phosphatase compare
IAI47_00895 -5.2 -23.8 phosphoenolpyruvate carboxylase compare
IAI47_01050 -5.1 -22.0 ketol-acid reductoisomerase compare
IAI47_00915 -5.1 -21.5 argininosuccinate synthase compare
IAI47_00760 -5.0 -6.9 envelope stress response regulator transcription factor CpxR compare
IAI47_16215 -5.0 -23.1 bifunctional aspartate kinase/homoserine dehydrogenase I compare
IAI47_13180 -5.0 -10.6 manganese-binding transcriptional regulator MntR compare
IAI47_07090 -4.9 -14.3 histidinol dehydrogenase compare
IAI47_12865 -4.9 -10.5 3-phosphoserine/phosphohydroxythreonine transaminase compare
IAI47_13900 -4.9 -20.0 asparagine synthase B compare
IAI47_04155 -4.9 -17.9 assimilatory sulfite reductase (NADPH) hemoprotein subunit compare
IAI47_18040 -4.9 -22.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
IAI47_07075 -4.8 -11.7 imidazole glycerol phosphate synthase subunit HisH compare
IAI47_16205 -4.8 -12.5 threonine synthase compare
IAI47_01030 -4.8 -20.5 branched-chain amino acid transaminase compare
IAI47_16015 -4.8 -9.1 3-isopropylmalate dehydratase small subunit compare
IAI47_03975 -4.8 -20.2 amino-acid N-acetyltransferase compare
IAI47_13770 -4.8 -11.9 citrate synthase compare
IAI47_09165 -4.7 -9.1 tryptophan synthase subunit alpha compare
IAI47_14350 -4.7 -9.5 5-(carboxyamino)imidazole ribonucleotide mutase compare
IAI47_00905 -4.6 -16.8 N-acetyl-gamma-glutamyl-phosphate reductase compare
IAI47_09190 -4.6 -15.1 anthranilate synthase component 1 compare
IAI47_16115 -4.6 -26.0 carbamoyl-phosphate synthase large subunit compare
IAI47_09180 -4.6 -14.4 anthranilate phosphoribosyltransferase compare
IAI47_16210 -4.6 -15.3 homoserine kinase compare
IAI47_16010 -4.6 -21.1 3-isopropylmalate dehydratase large subunit compare
IAI47_12215 -4.5 -16.3 dihydroorotase compare
IAI47_15115 -4.5 -12.0 glutamate-5-semialdehyde dehydrogenase compare
IAI47_14945 -4.5 -3.1 pyrroline-5-carboxylate reductase compare
IAI47_00910 -4.5 -13.4 acetylglutamate kinase compare
IAI47_09175 -4.5 -16.1 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
IAI47_01035 -4.5 -22.7 dihydroxy-acid dehydratase compare
IAI47_16120 -4.4 -14.4 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
IAI47_12705 -4.4 -16.5 quinone-dependent dihydroorotate dehydrogenase compare
IAI47_04150 -4.4 -19.3 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit compare
IAI47_04930 -4.4 -25.4 phosphoribosylformylglycinamidine synthase compare
IAI47_06275 -4.3 -22.8 amidophosphoribosyltransferase compare
IAI47_09170 -4.3 -14.6 tryptophan synthase subunit beta compare
IAI47_07095 -4.3 -11.9 ATP phosphoribosyltransferase compare
IAI47_13690 -4.3 -1.7 cell envelope integrity protein TolA compare
IAI47_16005 -4.3 -14.1 3-isopropylmalate dehydrogenase compare
IAI47_10520 -4.3 -5.0 pyridoxamine 5'-phosphate oxidase compare
IAI47_15810 -4.3 -2.9 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
IAI47_16830 -4.2 -20.2 ornithine carbamoyltransferase compare
IAI47_18015 -4.2 -19.0 homoserine O-succinyltransferase compare
IAI47_00920 -4.2 -20.1 argininosuccinate lyase compare
IAI47_13740 -4.1 -2.8 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
IAI47_00900 -4.1 -17.6 acetylornithine deacetylase compare
IAI47_17185 -4.1 -4.8 RNA polymerase factor sigma-54 compare
IAI47_15120 -4.0 -9.3 glutamate 5-kinase compare
IAI47_00455 -4.0 -15.1 nitrogen regulation protein NR(II) compare
IAI47_00780 -4.0 -5.5 6-phosphofructokinase compare
IAI47_04895 -4.0 -5.6 pyridoxine 5'-phosphate synthase compare
IAI47_04180 -3.9 -15.4 sulfate adenylyltransferase subunit CysD compare
IAI47_05070 -3.9 -1.5 outer membrane protein assembly factor BamB compare
IAI47_01040 -3.9 -13.6 threonine ammonia-lyase, biosynthetic compare
IAI47_18045 -3.9 -13.5 phosphoribosylamine--glycine ligase compare
IAI47_04410 -3.9 -17.6 bifunctional chorismate mutase/prephenate dehydratase compare
IAI47_13695 -3.9 -1.5 colicin uptake protein TolR compare
IAI47_04185 -3.8 -19.9 sulfate adenylyltransferase subunit CysN compare
IAI47_05180 -3.8 -16.0 phosphoribosylformylglycinamidine cyclo-ligase compare
IAI47_00880 -3.8 -18.1 cystathionine gamma-synthase compare
IAI47_04175 -3.8 -16.3 uroporphyrinogen-III C-methyltransferase compare
IAI47_14355 -3.7 -12.7 5-(carboxyamino)imidazole ribonucleotide synthase compare
IAI47_08085 -3.7 -10.7 helix-turn-helix domain-containing protein compare
IAI47_09040 -3.7 -3.8 NAD-dependent epimerase compare
IAI47_16860 -3.7 -16.7 aspartate carbamoyltransferase compare
IAI47_09275 -3.7 -12.0 orotidine-5'-phosphate decarboxylase compare
IAI47_00600 -3.6 -14.9 orotate phosphoribosyltransferase compare
IAI47_16000 -3.6 -18.2 2-isopropylmalate synthase compare
IAI47_13745 -3.6 -4.9 2-oxoglutarate dehydrogenase E1 component compare
IAI47_16080 -3.5 -9.0 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
IAI47_12645 -3.4 -8.2 porin OmpA compare
IAI47_00655 -3.4 -6.1 glycosyltransferase family 4 protein compare
IAI47_09240 -3.3 -2.3 HTH-type transcriptional regulator CysB compare
IAI47_09185 -3.3 -7.9 glutamine amidotransferase compare
IAI47_07165 -3.3 -3.8 exodeoxyribonuclease I compare
IAI47_13685 -3.2 -2.9 Tol-Pal system protein TolB compare
IAI47_00450 -3.2 -16.4 nitrogen regulation protein NR(I) compare
IAI47_03860 -3.2 -14.5 diaminopimelate decarboxylase compare
IAI47_02695 -3.0 -12.0 3'(2'),5'-bisphosphate nucleotidase CysQ compare
IAI47_15635 -3.0 -4.9 RNA polymerase-binding protein DksA compare
IAI47_15605 -2.9 -2.2 Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC compare
IAI47_04160 -2.8 -14.5 phosphoadenylyl-sulfate reductase compare
IAI47_00460 -2.7 -1.9 glutamate--ammonia ligase compare
IAI47_17020 -2.7 -5.8 30S ribosome-binding factor RbfA compare
IAI47_17965 -2.7 -12.3 glucose-6-phosphate isomerase compare
IAI47_00870 -2.5 -1.4 50S ribosomal protein L31 compare
IAI47_05390 -2.4 -8.0 sulfate/thiosulfate ABC transporter permease CysT compare
IAI47_12915 -2.3 -9.3 leucine-responsive transcriptional regulator Lrp compare
IAI47_05395 -2.3 -12.3 sulfate/thiosulfate ABC transporter permease CysW compare
IAI47_05465 -2.3 -6.9 bile acid:sodium symporter compare
IAI47_18270 -2.3 -5.3 twin-arginine translocase TatA/TatE family subunit compare
IAI47_16870 -2.2 -6.4 2-iminobutanoate/2-iminopropanoate deaminase compare
IAI47_12930 -2.2 -5.6 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC compare
IAI47_12925 -2.2 -5.1 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
IAI47_05155 -2.2 -15.3 polyphosphate kinase 1 compare
IAI47_10320 -2.1 -1.4 Rrf2 family transcriptional regulator compare
IAI47_04120 -2.1 -14.3 GTP diphosphokinase compare
IAI47_18145 -2.1 -2.5 elongation factor Tu compare
IAI47_11760 -2.1 -2.4 TonB-dependent siderophore receptor compare
IAI47_15595 -2.0 -2.3 Fe(3+)-hydroxamate ABC transporter permease FhuB compare
IAI47_17235 -1.9 -10.3 stringent starvation protein A compare
IAI47_21880 -1.9 -1.3 ParA family protein compare
IAI47_07885 -1.9 -2.0 tRNA-Asn compare
IAI47_09360 -1.9 -1.7 peptide ABC transporter ATP-binding protein SapF compare
IAI47_15700 -1.9 -10.3 multicopper oxidase CueO compare
IAI47_05385 -1.9 -12.2 sulfate ABC transporter substrate-binding protein compare
IAI47_07020 -1.9 -1.6 hypothetical protein compare
IAI47_01955 -1.9 -9.8 aspartate aminotransferase family protein compare
IAI47_07905 -1.9 -1.4 Arc family DNA-binding protein compare
IAI47_13635 -1.8 -8.5 quinolinate synthase NadA compare
IAI47_01365 -1.8 -1.7 inorganic phosphate transporter PitA compare
IAI47_05400 -1.8 -7.7 sulfate/thiosulfate ABC transporter ATP-binding protein CysA compare
IAI47_03855 -1.8 -5.6 LysR family transcriptional regulator compare
IAI47_18315 -1.7 -6.7 HTH-type transcriptional regulator MetR compare
IAI47_03240 -1.6 -3.6 TonB system transport protein ExbD compare
IAI47_15845 -1.6 -8.3 carboxylating nicotinate-nucleotide diphosphorylase compare
IAI47_16220 -1.5 -4.4 thr operon leader peptide compare
IAI47_14395 -1.5 -6.3 Cu(I)-responsive transcriptional regulator compare
IAI47_16085 -1.5 -2.5 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA compare
IAI47_03375 -1.5 -7.8 peptide chain release factor 3 compare
IAI47_02585 -1.5 -4.5 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
IAI47_13720 -1.5 -3.9 cytochrome d ubiquinol oxidase subunit II compare
IAI47_06980 -1.5 -4.2 colanic acid biosynthesis pyruvyl transferase WcaK compare
IAI47_17910 -1.5 -3.1 chorismate lyase compare
IAI47_03235 -1.4 -4.5 tol-pal system-associated acyl-CoA thioesterase compare
IAI47_05440 -1.4 -7.4 cysteine synthase A compare
IAI47_05425 -1.4 -3.9 phosphoenolpyruvate-protein phosphotransferase PtsI compare
IAI47_17900 -1.4 -1.3 glycerol-3-phosphate 1-O-acyltransferase PlsB compare
IAI47_21335 -1.4 -2.9 RepB family plasmid replication initiator protein compare
IAI47_06750 -1.3 -8.0 outer membrane permeability protein SanA compare
IAI47_17005 -1.3 -6.2 polyribonucleotide nucleotidyltransferase compare
IAI47_15660 -1.3 -5.0 pantoate--beta-alanine ligase compare
IAI47_13725 -1.3 -4.9 cytochrome ubiquinol oxidase subunit I compare
IAI47_11450 -1.3 -5.1 ankyrin repeat domain-containing protein compare
IAI47_12030 -1.2 -8.3 PTS glucose transporter subunit IIBC compare
IAI47_06320 -1.2 -5.6 phosphate acetyltransferase compare
IAI47_06325 -1.2 -4.7 acetate kinase compare
IAI47_06245 -1.2 -2.8 tRNA pseudouridine(38-40) synthase TruA compare
IAI47_13155 -1.2 -2.7 H-NS histone family protein compare
IAI47_03640 -1.2 -9.7 glycosyltransferase compare
IAI47_00675 -1.1 -9.9 glycosyltransferase family 9 protein compare
IAI47_06355 -1.1 -6.9 transcriptional regulator LrhA compare
IAI47_05195 -1.1 -2.1 DnaA inactivator Hda compare
IAI47_12055 -1.1 -6.1 aminodeoxychorismate lyase compare
IAI47_18520 -1.1 -9.8 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
IAI47_14040 -1.1 -8.6 D-alanyl-D-alanine carboxypeptidase DacA compare
IAI47_15540 -1.1 -6.3 bifunctional uridylyltransferase/uridylyl-removing protein GlnD compare
IAI47_03135 -1.1 -4.5 outer membrane channel protein TolC compare
IAI47_18240 -1.1 -2.0 NAD(P)H-flavin reductase compare
IAI47_15345 -1.1 -8.5 murein transglycosylase D compare
IAI47_09010 -1.1 -4.4 formyltetrahydrofolate deformylase compare
IAI47_15995 -1.1 -1.1 leu operon leader peptide compare
IAI47_00465 -1.0 -2.7 ribosome-dependent GTPase TypA compare
IAI47_17120 -1.0 -1.9 BolA family iron metabolism protein IbaG compare
IAI47_02350 -1.0 -1.0 tRNA-Thr compare
IAI47_03615 -1.0 -4.9 glutathione synthase compare
IAI47_18480 -1.0 -6.7 lipid III flippase WzxE compare
IAI47_13545 -1.0 -5.9 6-phosphogluconolactonase compare
IAI47_12050 -1.0 -6.3 cell division protein YceG compare
IAI47_04845 -1.0 -7.9 L-aspartate oxidase compare
IAI47_09580 -1.0 -3.0 FNR family transcription factor compare
IAI47_07010 -1.0 -1.4 ABC transporter permease compare
IAI47_00670 -1.0 -8.7 sugar glycosyltransferase compare
IAI47_00515 -1.0 -2.5 DNA-directed RNA polymerase subunit omega compare
IAI47_06270 -1.0 -5.4 colicin V production protein compare
IAI47_18410 -1.0 -3.0 diaminopimelate epimerase compare
IAI47_05175 -1.0 -5.4 phosphoribosylglycinamide formyltransferase compare
IAI47_10925 -1.0 -2.3 EAL domain-containing protein compare
IAI47_07550 -0.9 -1.2 tRNA-Asn compare
IAI47_05520 -0.9 -1.3 tRNA-Ala compare
IAI47_02090 -0.9 -2.7 elongation factor Tu compare
IAI47_01120 -0.9 -5.2 manganese efflux pump MntP compare
IAI47_19945 -0.9 -0.9 hypothetical protein compare
IAI47_18400 -0.9 -1.7 tyrosine recombinase XerC compare
IAI47_03645 -0.9 -7.6 O-antigen ligase family protein compare
IAI47_03555 -0.9 -4.7 oxidative damage protection protein compare
IAI47_00875 -0.9 -1.1 met regulon transcriptional regulator MetJ compare
IAI47_11550 -0.9 -2.5 hypothetical protein compare
IAI47_12880 -0.9 -7.6 formate C-acetyltransferase compare
IAI47_04350 -0.9 -6.6 glutamate--cysteine ligase compare
IAI47_18470 -0.9 -7.1 ECA oligosaccharide polymerase compare
IAI47_04705 -0.9 -1.2 hypothetical protein compare
IAI47_10775 -0.9 -3.7 ribonuclease T compare
IAI47_20595 -0.8 -3.5 GhoT/OrtT family toxin compare
IAI47_13885 -0.8 -1.2 N-acetylglucosamine-6-phosphate deacetylase compare
IAI47_18215 -0.8 -1.5 Trk system potassium transporter TrkH compare
IAI47_12885 -0.8 -4.7 pyruvate formate lyase 1-activating protein compare


Specific Phenotypes

For 4 genes in this experiment

For stress Nickel (II) chloride hexahydrate in Pantoea sp. MT58

For stress Nickel (II) chloride hexahydrate across organisms