Experiment set1IT059 for Azospirillum brasilense Sp245

Compare to:

LB with Bacitracin 0.25 mg/ml

Group: stress
Media: LB + Bacitracin (0.25 mg/ml)
Culturing: AzoBra_ML2a, 48 well microplate; Tecan Infinite F200, Aerobic, at 25 (C), shaken=orbital
By: Mark on 3/5/2015
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: 1178 E3,E4

Specific Phenotypes

For 15 genes in this experiment

For stress Bacitracin in Azospirillum brasilense Sp245

For stress Bacitracin across organisms

SEED Subsystems

Subsystem #Specific
ABC transporter oligopeptide (TC 3.A.1.5.1) 2
Carotenoids 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
epoxysqualene biosynthesis 3 2 2
neurosporene biosynthesis 5 2 2
trans-lycopene biosynthesis I 6 2 2
trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) 8 3 2
β-carotene biosynthesis (engineered) 8 2 2
lycopadiene biosynthesis 7 1 1
cholesterol biosynthesis II (via 24,25-dihydrolanosterol) 16 2 2
cholesterol biosynthesis III (via desmosterol) 16 2 2
cholesterol biosynthesis I 16 2 2
4,4'-diapolycopenedioate biosynthesis 9 1 1
botryococcenes and methylated squalene biosynthesis 9 1 1
staphyloxanthin biosynthesis 9 1 1
superpathway of carotenoid biosynthesis in plants 22 3 2
superpathway of ergosterol biosynthesis II 26 10 2
superpathway of ergosterol biosynthesis I 26 5 2
hopanoid biosynthesis (bacteria) 14 5 1
superpathway of cholesterol biosynthesis 38 5 2