Experiment set1IT059 for Methanococcus maripaludis JJ

Compare to:

H2 pooled triplicate biofilm cells

200 most important genes:

  gene name fitness t score description  
MMJJ_RS04200 -5.5 -7.5 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS01810 -5.1 -1.9 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS04800 -4.7 -7.2 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS02045 -4.7 -3.2 molybdenum cofactor guanylyltransferase compare
MMJJ_RS01865 -4.6 -6.7 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS04970 -4.5 -2.0 DUF655 domain-containing protein compare
MMJJ_RS03670 -4.4 -6.0 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS00210 -4.3 -2.9 DUF530 family protein compare
MMJJ_RS04155 -4.3 -8.6 hypothetical protein compare
MMJJ_RS03620 -4.3 -7.1 DUF2097 domain-containing protein compare
MMJJ_RS06625 -4.2 -1.8 pyruvate synthase subunit PorB compare
MMJJ_RS00450 -4.1 -1.8 DUF126 domain-containing protein compare
MMJJ_RS04150 -4.1 -3.5 DUF5379 domain-containing protein compare
MMJJ_RS06695 -4.1 -2.3 amidohydrolase compare
MMJJ_RS08660 -4.0 -2.6 acetylornithine transaminase compare
MMJJ_RS03785 -4.0 -2.3 hypothetical protein compare
MMJJ_RS00425 -3.9 -4.7 hypothetical protein compare
MMJJ_RS06485 -3.9 -2.4 phosphoglycerate kinase compare
MMJJ_RS08095 -3.9 -4.6 cobyric acid synthase CobQ compare
MMJJ_RS08320 -3.9 -3.1 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS03310 -3.9 -2.6 hypothetical protein compare
MMJJ_RS05650 -3.9 -3.1 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS04685 -3.9 -11.7 carbamoyltransferase HypF compare
MMJJ_RS04050 -3.9 -1.9 dihydroneopterin aldolase family protein compare
MMJJ_RS06390 -3.9 -1.7 NADPH-dependent F420 reductase compare
MMJJ_RS03760 -3.8 -4.0 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS09135 -3.8 -10.6 archaeosine biosynthesis radical SAM protein RaSEA compare
MMJJ_RS06110 -3.7 -3.1 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS01690 -3.7 -4.0 methanogenesis marker 12 protein compare
MMJJ_RS03580 -3.7 -3.0 TIGR00303 family protein compare
MMJJ_RS03055 -3.7 -3.5 hypothetical protein compare
MMJJ_RS03615 -3.6 -3.6 cobalt-precorrin-8 methylmutase compare
MMJJ_RS01880 -3.6 -3.5 RlmE family RNA methyltransferase compare
MMJJ_RS05445 -3.6 -1.5 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS05415 -3.6 -1.7 hypothetical protein compare
MMJJ_RS07950 -3.6 -3.5 4Fe-4S binding protein compare
MMJJ_RS08840 -3.5 -4.2 calcium/sodium antiporter compare
MMJJ_RS07000 -3.5 -1.5 TrkH family potassium uptake protein compare
MMJJ_RS07725 -3.5 -6.9 DNA primase DnaG compare
MMJJ_RS03840 -3.4 -5.1 DHH family phosphoesterase compare
MMJJ_RS09190 -3.4 -1.8 tryptophan synthase subunit beta compare
MMJJ_RS00215 -3.4 -1.8 CCA tRNA nucleotidyltransferase compare
MMJJ_RS08850 -3.4 -3.2 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS01935 -3.4 -5.6 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS01750 -3.4 -1.8 ferrous iron transport protein A compare
MMJJ_RS06180 -3.4 -2.9 tryptophan--tRNA ligase compare
MMJJ_RS07785 -3.4 -2.7 fumarate reductase subunit A compare
MMJJ_RS03815 -3.4 -2.3 nascent polypeptide-associated complex protein compare
MMJJ_RS04980 -3.4 -5.7 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS03895 -3.3 -3.3 hydrogenase expression/formation protein HypE compare
MMJJ_RS06155 -3.3 -6.9 phosphatidylglycerophosphatase A compare
MMJJ_RS01350 -3.3 -7.8 sodium:proton antiporter compare
MMJJ_RS06220 -3.3 -6.5 polyamine aminopropyltransferase compare
MMJJ_RS02920 -3.3 -2.3 30S ribosomal protein S27ae compare
MMJJ_RS06905 -3.2 -2.0 hypothetical protein compare
MMJJ_RS06725 -3.2 -13.7 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS05330 -3.2 -2.5 DNA polymerase II large subunit compare
MMJJ_RS08080 -3.2 -8.8 TIGR00300 family protein compare
MMJJ_RS01755 -3.2 -2.4 ferrous iron transport protein B compare
MMJJ_RS08795 -3.2 -1.8 phosphoglucosamine mutase compare
MMJJ_RS00270 -3.2 -3.1 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS03155 -3.2 -11.5 hypothetical protein compare
MMJJ_RS06880 -3.2 -1.9 EhaG family protein compare
MMJJ_RS09375 -3.2 -2.0 hypothetical protein compare
MMJJ_RS05260 -3.2 -6.6 ATP-grasp domain-containing protein compare
MMJJ_RS07705 -3.2 -3.2 GTP-binding protein EngB compare
MMJJ_RS04790 -3.1 -4.6 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS03875 -3.1 -4.5 CBS domain-containing protein compare
MMJJ_RS04145 -3.1 -8.7 glutamate-1-semialdehyde 2,1-aminomutase compare
MMJJ_RS07875 -3.1 -2.3 FAD-dependent oxidoreductase compare
MMJJ_RS00560 -3.1 -3.8 homoisocitrate dehydrogenase compare
MMJJ_RS04700 -3.1 -7.2 deoxyhypusine synthase compare
MMJJ_RS02090 -3.1 -4.6 tyramine--L-glutamate ligase compare
MMJJ_RS06040 -3.1 -4.3 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS05620 -3.1 -5.4 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS01360 -3.1 -1.6 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS05810 -3.1 -7.9 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS02055 -3.1 -11.9 GTP 3',8-cyclase MoaA compare
MMJJ_RS01355 -3.1 -2.9 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS07265 -3.0 -12.6 tRNA (adenine-N1)-methyltransferase compare
MMJJ_RS00205 -3.0 -6.5 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS09175 -3.0 -0.9 anthranilate synthase component I compare
MMJJ_RS06255 -3.0 -6.9 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS08155 -3.0 -5.1 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS03190 -3.0 -3.0 phosphopyruvate hydratase compare
MMJJ_RS01870 -3.0 -2.9 methanogenesis marker 15 protein compare
MMJJ_RS07430 -3.0 -3.5 ribonuclease VapC compare
MMJJ_RS09055 -3.0 -9.5 NFACT family protein compare
MMJJ_RS00550 -3.0 -7.5 AIR synthase-related protein compare
MMJJ_RS00275 -3.0 -2.4 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS03150 -3.0 -6.0 2-phospho-L-lactate transferase compare
MMJJ_RS00570 -3.0 -2.0 ribonuclease P compare
MMJJ_RS04730 -2.9 -3.0 tyrosine decarboxylase MfnA compare
MMJJ_RS05070 -2.9 -1.9 DNA primase catalytic subunit PriS compare
MMJJ_RS07720 -2.9 -2.2 UPF0058 family protein compare
MMJJ_RS01475 -2.9 -1.4 signal recognition particle-docking protein FtsY compare
MMJJ_RS03820 -2.9 -3.4 hydrogenase formation protein HypD compare
MMJJ_RS04565 -2.9 -4.2 sirohydrochlorin nickelochelatase compare
MMJJ_RS07245 -2.9 -6.3 amidohydrolase family protein compare
MMJJ_RS02275 -2.9 -4.4 nucleotidyltransferase domain-containing protein compare
MMJJ_RS01200 -2.9 -3.0 PRC-barrel domain-containing protein compare
MMJJ_RS03230 -2.9 -3.9 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS05655 -2.8 -7.6 HisA/HisF family protein compare
MMJJ_RS04110 -2.8 -6.9 hypothetical protein compare
MMJJ_RS05930 -2.8 -2.0 cell division protein SepF compare
MMJJ_RS00355 -2.8 -1.6 ribonuclease P protein component 4 compare
MMJJ_RS03005 -2.8 -2.6 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS06805 -2.8 -3.6 monovalent cation/H+ antiporter subunit E compare
MMJJ_RS07350 -2.8 -4.3 4Fe-4S binding protein compare
MMJJ_RS08855 -2.8 -3.8 cyclic pyranopterin monophosphate synthase MoaC compare
MMJJ_RS02200 -2.8 -11.7 chorismate pyruvate-lyase family protein compare
MMJJ_RS07505 -2.8 -1.0 DNA-directed RNA polymerase subunit K compare
MMJJ_RS01860 -2.8 -13.6 tRNA guanosine(15) transglycosylase TgtA compare
MMJJ_RS04505 -2.8 -7.3 CDC48 family AAA ATPase compare
MMJJ_RS04995 -2.7 -5.7 Tfx family DNA-binding protein compare
MMJJ_RS06240 -2.7 -2.2 dihydropteroate synthase-like protein compare
MMJJ_RS08055 -2.7 -8.4 methanogenesis marker 14 protein compare
MMJJ_RS00600 -2.7 -2.4 hydroxymethylbilane synthase compare
MMJJ_RS01415 -2.7 -2.3 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS03170 -2.7 -9.1 DUF5612 domain-containing protein compare
MMJJ_RS05610 -2.7 -4.4 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS07275 -2.7 -2.4 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS03865 -2.7 -1.9 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS00195 -2.7 -4.1 precorrin-3B C(17)-methyltransferase compare
MMJJ_RS08340 -2.7 -5.3 archaeoflavoprotein AfpA compare
MMJJ_RS05950 -2.7 -3.4 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS04670 -2.7 -4.8 DUF2117 domain-containing protein compare
MMJJ_RS05155 -2.7 -6.4 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS00125 -2.6 -2.6 KEOPS complex subunit Cgi121 compare
MMJJ_RS03125 -2.6 -5.2 GMC oxidoreductase compare
MMJJ_RS00265 -2.6 -7.7 TIGR02253 family HAD-type hydrolase compare
MMJJ_RS08335 -2.6 -2.5 ABC transporter ATP-binding protein compare
MMJJ_RS06930 -2.6 -2.3 type II methionyl aminopeptidase compare
MMJJ_RS07995 -2.6 -6.1 molybdenum cofactor biosynthesis protein MoaE compare
MMJJ_RS06490 -2.6 -2.2 methanogenesis marker 2 protein compare
MMJJ_RS07375 -2.6 -8.7 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMJJ_RS08620 -2.6 -4.4 DUF373 family protein compare
MMJJ_RS05490 -2.6 -2.6 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS03110 -2.6 -3.8 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS05595 -2.6 -3.5 hypothetical protein compare
MMJJ_RS06215 -2.6 -5.1 agmatinase compare
MMJJ_RS03065 -2.5 -12.3 CBS domain-containing protein compare
MMJJ_RS07410 -2.5 -3.6 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS06150 -2.5 -4.7 DUF483 domain-containing protein compare
MMJJ_RS05065 -2.5 -2.9 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS04650 -2.5 -6.3 nitrogenase iron protein compare
MMJJ_RS06910 -2.5 -3.3 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS06705 -2.5 -4.5 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS06225 -2.5 -1.9 adenosylmethionine decarboxylase compare
MMJJ_RS00360 -2.5 -2.7 adenosylhomocysteinase compare
MMJJ_RS03200 -2.5 -2.1 uroporphyrinogen-III synthase compare
MMJJ_RS08000 -2.5 -9.1 HesA/MoeB/ThiF family protein compare
MMJJ_RS07455 -2.5 -7.3 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS05295 -2.5 -10.8 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS05720 -2.5 -1.8 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS04675 -2.4 -6.8 thiamine pyrophosphate-binding protein compare
MMJJ_RS00475 -2.4 -1.9 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS04615 -2.4 -4.0 methanogenesis marker 3 protein compare
MMJJ_RS07155 -2.4 -10.0 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS08625 -2.4 -7.8 magnesium/cobalt transporter CorA compare
MMJJ_RS06760 -2.4 -4.3 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS05575 -2.4 -3.3 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS07715 -2.4 -2.9 UbiD family decarboxylase compare
MMJJ_RS09035 -2.3 -6.0 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS06860 -2.2 -4.4 hypothetical protein compare
MMJJ_RS07190 -2.2 -3.8 RtcB family protein compare
MMJJ_RS01785 -2.2 -1.4 50S ribosomal protein L14e compare
MMJJ_RS04520 -2.2 -5.0 coenzyme F430 synthase compare
MMJJ_RS01830 -2.2 -3.0 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS06840 -2.2 -3.5 nickel-dependent hydrogenase large subunit compare
MMJJ_RS07415 -2.1 -1.8 polyprenyl diphosphate synthase compare
MMJJ_RS08535 -2.1 -3.0 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS03060 -2.1 -2.7 methanogenesis marker 7 protein compare
MMJJ_RS06250 -2.1 -1.9 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS05160 -2.1 -2.5 RNA-binding protein compare
MMJJ_RS06700 -2.1 -4.1 L-seryl-tRNA(Sec) kinase compare
MMJJ_RS07165 -2.1 -11.4 chromosome segregation protein SMC compare
MMJJ_RS06170 -2.1 -7.8 hypothetical protein compare
MMJJ_RS06750 -2.1 -1.8 homoaconitase large subunit compare
MMJJ_RS04040 -2.1 -6.4 prefoldin subunit beta compare
MMJJ_RS07170 -2.1 -4.4 pyridoxal phosphate-dependent aminotransferase compare
MMJJ_RS05770 -2.1 -2.1 flagellar protein D compare
MMJJ_RS05995 -2.1 -2.1 ATP-binding cassette domain-containing protein compare
MMJJ_RS06885 -2.1 -2.1 EhaF family protein compare
MMJJ_RS01820 -2.0 -3.9 MJ1244 family protein compare
MMJJ_RS01600 -2.0 -2.3 radical SAM protein compare
MMJJ_RS04680 -2.0 -9.5 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMJJ_RS04010 -2.0 -5.1 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS06565 -2.0 -4.8 segregation/condensation protein A compare
MMJJ_RS07960 -2.0 -2.5 quinolinate synthase NadA compare
MMJJ_RS01815 -2.0 -3.7 DUF134 domain-containing protein compare
MMJJ_RS08035 -2.0 -5.1 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMJJ_RS01875 -2.0 -6.5 global nitrogen regulator NrpR compare
MMJJ_RS04655 -2.0 -3.8 FAD-dependent oxidoreductase compare
MMJJ_RS08725 -2.0 -11.3 flippase compare
MMJJ_RS06010 -2.0 -6.3 hypothetical protein compare
MMJJ_RS06375 -1.9 -3.9 UbiX family flavin prenyltransferase compare
MMJJ_RS02935 -1.9 -3.2 DNA-directed RNA polymerase subunit E'' compare
MMJJ_RS08020 -1.9 -8.2 nucleotidyltransferase domain-containing protein compare
MMJJ_RS07035 -1.9 -2.1 glycosyl transferase compare


Specific Phenotypes

For 1 genes in this experiment