Experiment set1IT058 for Methanococcus maripaludis JJ

Compare to:

H2 pooled triplicate planktonic cells

200 most important genes:

  gene name fitness t score description  
MMJJ_RS01865 -5.9 -2.8 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS04200 -5.5 -6.9 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS02040 -5.1 -1.9 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS01935 -5.1 -2.6 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS04800 -4.9 -5.5 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS00210 -4.8 -1.7 DUF530 family protein compare
MMJJ_RS02055 -4.8 -16.3 GTP 3',8-cyclase MoaA compare
MMJJ_RS07995 -4.6 -6.7 molybdenum cofactor biosynthesis protein MoaE compare
MMJJ_RS08855 -4.6 -3.2 cyclic pyranopterin monophosphate synthase MoaC compare
MMJJ_RS02935 -4.6 -2.5 DNA-directed RNA polymerase subunit E'' compare
MMJJ_RS04155 -4.6 -6.3 hypothetical protein compare
MMJJ_RS04685 -4.6 -8.2 carbamoyltransferase HypF compare
MMJJ_RS08320 -4.4 -2.2 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS09135 -4.4 -9.1 archaeosine biosynthesis radical SAM protein RaSEA compare
MMJJ_RS02045 -4.4 -2.4 molybdenum cofactor guanylyltransferase compare
MMJJ_RS04970 -4.4 -1.4 DUF655 domain-containing protein compare
MMJJ_RS08850 -4.3 -1.7 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS03670 -4.3 -4.5 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS07360 -4.3 -1.2 TIGR00269 family protein compare
MMJJ_RS01870 -4.3 -1.5 methanogenesis marker 15 protein compare
MMJJ_RS06215 -4.2 -3.5 agmatinase compare
MMJJ_RS02275 -4.2 -3.5 nucleotidyltransferase domain-containing protein compare
MMJJ_RS06040 -4.2 -2.7 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS09375 -4.1 -1.5 hypothetical protein compare
MMJJ_RS00570 -4.1 -1.5 ribonuclease P compare
MMJJ_RS03620 -4.1 -6.2 DUF2097 domain-containing protein compare
MMJJ_RS07430 -4.1 -2.7 ribonuclease VapC compare
MMJJ_RS03055 -4.0 -2.4 hypothetical protein compare
MMJJ_RS07725 -4.0 -2.6 DNA primase DnaG compare
MMJJ_RS06725 -4.0 -14.2 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS02200 -4.0 -11.8 chorismate pyruvate-lyase family protein compare
MMJJ_RS05650 -4.0 -1.8 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS08340 -3.9 -5.0 archaeoflavoprotein AfpA compare
MMJJ_RS01880 -3.9 -2.7 RlmE family RNA methyltransferase compare
MMJJ_RS03760 -3.9 -3.0 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS06860 -3.9 -3.1 hypothetical protein compare
MMJJ_RS09190 -3.9 -1.0 tryptophan synthase subunit beta compare
MMJJ_RS04145 -3.9 -11.2 glutamate-1-semialdehyde 2,1-aminomutase compare
MMJJ_RS07720 -3.8 -1.6 UPF0058 family protein compare
MMJJ_RS03580 -3.8 -1.7 TIGR00303 family protein compare
MMJJ_RS08535 -3.8 -1.7 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS07785 -3.8 -1.6 fumarate reductase subunit A compare
MMJJ_RS08625 -3.8 -8.3 magnesium/cobalt transporter CorA compare
MMJJ_RS04650 -3.8 -5.1 nitrogenase iron protein compare
MMJJ_RS03840 -3.7 -3.1 DHH family phosphoesterase compare
MMJJ_RS08840 -3.7 -2.1 calcium/sodium antiporter compare
MMJJ_RS06695 -3.7 -1.6 amidohydrolase compare
MMJJ_RS03095 -3.6 -1.4 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS01350 -3.6 -6.3 sodium:proton antiporter compare
MMJJ_RS03150 -3.6 -3.4 2-phospho-L-lactate transferase compare
MMJJ_RS05620 -3.6 -4.1 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS03110 -3.5 -3.0 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS07950 -3.5 -2.4 4Fe-4S binding protein compare
MMJJ_RS07265 -3.5 -13.7 tRNA (adenine-N1)-methyltransferase compare
MMJJ_RS00275 -3.5 -1.2 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS03125 -3.5 -3.6 GMC oxidoreductase compare
MMJJ_RS07705 -3.5 -1.7 GTP-binding protein EngB compare
MMJJ_RS04980 -3.5 -4.9 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS05810 -3.5 -6.5 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS08095 -3.5 -3.7 cobyric acid synthase CobQ compare
MMJJ_RS06485 -3.5 -1.6 phosphoglycerate kinase compare
MMJJ_RS08155 -3.5 -4.3 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS04790 -3.5 -2.8 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS03785 -3.5 -2.0 hypothetical protein compare
MMJJ_RS00125 -3.5 -1.5 KEOPS complex subunit Cgi121 compare
MMJJ_RS05995 -3.4 -1.7 ATP-binding cassette domain-containing protein compare
MMJJ_RS07470 -3.4 -1.1 50S ribosome-binding GTPase compare
MMJJ_RS04700 -3.4 -5.9 deoxyhypusine synthase compare
MMJJ_RS06390 -3.4 -1.1 NADPH-dependent F420 reductase compare
MMJJ_RS01860 -3.4 -14.4 tRNA guanosine(15) transglycosylase TgtA compare
MMJJ_RS05065 -3.4 -2.8 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS03190 -3.4 -1.5 phosphopyruvate hydratase compare
MMJJ_RS04995 -3.4 -5.0 Tfx family DNA-binding protein compare
MMJJ_RS04565 -3.4 -3.4 sirohydrochlorin nickelochelatase compare
MMJJ_RS01815 -3.4 -3.4 DUF134 domain-containing protein compare
MMJJ_RS05445 -3.4 -1.1 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS05415 -3.4 -1.2 hypothetical protein compare
MMJJ_RS05770 -3.3 -1.6 flagellar protein D compare
MMJJ_RS06110 -3.3 -2.2 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS00560 -3.3 -2.6 homoisocitrate dehydrogenase compare
MMJJ_RS06225 -3.3 -1.2 adenosylmethionine decarboxylase compare
MMJJ_RS04050 -3.3 -1.5 dihydroneopterin aldolase family protein compare
MMJJ_RS04110 -3.3 -5.9 hypothetical protein compare
MMJJ_RS08620 -3.3 -5.1 DUF373 family protein compare
MMJJ_RS08080 -3.3 -8.8 TIGR00300 family protein compare
MMJJ_RS07715 -3.3 -2.3 UbiD family decarboxylase compare
MMJJ_RS02920 -3.3 -1.7 30S ribosomal protein S27ae compare
MMJJ_RS03815 -3.3 -1.8 nascent polypeptide-associated complex protein compare
MMJJ_RS03310 -3.2 -2.7 hypothetical protein compare
MMJJ_RS00270 -3.2 -2.3 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS01810 -3.2 -1.4 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS00550 -3.2 -8.4 AIR synthase-related protein compare
MMJJ_RS00475 -3.2 -1.4 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS07000 -3.2 -1.0 TrkH family potassium uptake protein compare
MMJJ_RS00215 -3.2 -1.2 CCA tRNA nucleotidyltransferase compare
MMJJ_RS03865 -3.2 -1.2 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS06910 -3.2 -2.4 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS01755 -3.2 -1.3 ferrous iron transport protein B compare
MMJJ_RS05490 -3.2 -1.4 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS05655 -3.2 -6.6 HisA/HisF family protein compare
MMJJ_RS08660 -3.2 -2.5 acetylornithine transaminase compare
MMJJ_RS00425 -3.2 -3.5 hypothetical protein compare
MMJJ_RS01600 -3.1 -1.3 radical SAM protein compare
MMJJ_RS05155 -3.1 -4.4 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS05295 -3.1 -14.8 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS06155 -3.1 -5.3 phosphatidylglycerophosphatase A compare
MMJJ_RS01750 -3.1 -1.2 ferrous iron transport protein A compare
MMJJ_RS07245 -3.1 -4.7 amidohydrolase family protein compare
MMJJ_RS01200 -3.1 -1.5 PRC-barrel domain-containing protein compare
MMJJ_RS03200 -3.1 -1.1 uroporphyrinogen-III synthase compare
MMJJ_RS06855 -3.1 -1.2 DUF2104 domain-containing protein compare
MMJJ_RS03155 -3.1 -10.2 hypothetical protein compare
MMJJ_RS06510 -3.1 -1.2 LL-diaminopimelate aminotransferase compare
MMJJ_RS01820 -3.1 -4.4 MJ1244 family protein compare
MMJJ_RS00205 -3.1 -5.0 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS05950 -3.1 -2.8 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS05330 -3.1 -1.8 DNA polymerase II large subunit compare
MMJJ_RS06150 -3.0 -4.3 DUF483 domain-containing protein compare
MMJJ_RS03820 -3.0 -1.7 hydrogenase formation protein HypD compare
MMJJ_RS04675 -3.0 -7.0 thiamine pyrophosphate-binding protein compare
MMJJ_RS01355 -3.0 -2.1 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS03615 -3.0 -2.8 cobalt-precorrin-8 methylmutase compare
MMJJ_RS06700 -3.0 -4.9 L-seryl-tRNA(Sec) kinase compare
MMJJ_RS08795 -3.0 -1.2 phosphoglucosamine mutase compare
MMJJ_RS06625 -3.0 -1.3 pyruvate synthase subunit PorB compare
MMJJ_RS05260 -3.0 -5.6 ATP-grasp domain-containing protein compare
MMJJ_RS06600 -3.0 -1.8 DUF555 domain-containing protein compare
MMJJ_RS04150 -2.9 -3.0 DUF5379 domain-containing protein compare
MMJJ_RS05590 -2.9 -0.9 homoserine dehydrogenase compare
MMJJ_RS06930 -2.9 -1.6 type II methionyl aminopeptidase compare
MMJJ_RS08170 -2.9 -1.4 diaminopimelate decarboxylase compare
MMJJ_RS05930 -2.9 -1.4 cell division protein SepF compare
MMJJ_RS05160 -2.9 -2.6 RNA-binding protein compare
MMJJ_RS02090 -2.9 -3.9 tyramine--L-glutamate ligase compare
MMJJ_RS06250 -2.9 -1.2 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS08000 -2.9 -8.3 HesA/MoeB/ThiF family protein compare
MMJJ_RS06220 -2.9 -4.2 polyamine aminopropyltransferase compare
MMJJ_RS05610 -2.9 -3.3 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS03895 -2.8 -2.2 hydrogenase expression/formation protein HypE compare
MMJJ_RS01415 -2.8 -1.5 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS05575 -2.8 -3.2 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS08925 -2.8 -11.7 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS07350 -2.8 -3.8 4Fe-4S binding protein compare
MMJJ_RS03225 -2.8 -1.5 4Fe-4S binding protein compare
MMJJ_RS08010 -2.7 -6.2 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS07945 -2.7 -1.6 4Fe-4S binding protein compare
MMJJ_RS06750 -2.7 -1.0 homoaconitase large subunit compare
MMJJ_RS03170 -2.7 -7.2 DUF5612 domain-containing protein compare
MMJJ_RS07165 -2.7 -14.5 chromosome segregation protein SMC compare
MMJJ_RS00580 -2.7 -0.7 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS02190 -2.7 -11.5 molybdopterin biosynthesis protein compare
MMJJ_RS08250 -2.7 -5.7 hydrogenase maturation peptidase HycI compare
MMJJ_RS08055 -2.7 -6.5 methanogenesis marker 14 protein compare
MMJJ_RS06805 -2.7 -2.4 monovalent cation/H+ antiporter subunit E compare
MMJJ_RS09085 -2.7 -13.7 minichromosome maintenance protein MCM compare
MMJJ_RS09055 -2.7 -8.8 NFACT family protein compare
MMJJ_RS08335 -2.7 -1.8 ABC transporter ATP-binding protein compare
MMJJ_RS04520 -2.7 -4.6 coenzyme F430 synthase compare
MMJJ_RS04670 -2.7 -4.4 DUF2117 domain-containing protein compare
MMJJ_RS07980 -2.6 -10.3 biotin synthase BioB compare
MMJJ_RS06240 -2.6 -1.4 dihydropteroate synthase-like protein compare
MMJJ_RS06255 -2.6 -5.4 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS03875 -2.6 -2.7 CBS domain-containing protein compare
MMJJ_RS07375 -2.6 -8.4 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMJJ_RS04730 -2.6 -2.2 tyrosine decarboxylase MfnA compare
MMJJ_RS06840 -2.6 -2.4 nickel-dependent hydrogenase large subunit compare
MMJJ_RS00520 -2.6 -7.1 PDGLE domain-containing protein compare
MMJJ_RS06170 -2.6 -9.8 hypothetical protein compare
MMJJ_RS01830 -2.5 -3.0 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS05720 -2.5 -1.1 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS07410 -2.5 -2.8 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS08575 -2.5 -2.9 hypothetical protein compare
MMJJ_RS05725 -2.5 -12.4 UPF0179 family protein compare
MMJJ_RS01345 -2.5 -3.9 (5-formylfuran-3-yl)methyl phosphate synthase compare
MMJJ_RS03060 -2.5 -2.7 methanogenesis marker 7 protein compare
MMJJ_RS07190 -2.5 -2.4 RtcB family protein compare
MMJJ_RS04505 -2.5 -6.2 CDC48 family AAA ATPase compare
MMJJ_RS03540 -2.5 -4.6 TIGR00289 family protein compare
MMJJ_RS03005 -2.5 -2.1 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS00450 -2.5 -1.2 DUF126 domain-containing protein compare
MMJJ_RS01405 -2.5 -0.8 proline--tRNA ligase compare
MMJJ_RS08020 -2.5 -9.2 nucleotidyltransferase domain-containing protein compare
MMJJ_RS07455 -2.5 -7.0 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS07370 -2.5 -4.6 tRNA 4-thiouridine(8) synthase ThiI compare
MMJJ_RS09300 -2.5 -2.2 hypothetical protein compare
MMJJ_RS07415 -2.4 -1.3 polyprenyl diphosphate synthase compare
MMJJ_RS06730 -2.4 -6.6 ATP-binding cassette domain-containing protein compare
MMJJ_RS03230 -2.4 -2.9 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS06050 -2.4 -7.4 molybdopterin molybdotransferase MoeA compare
MMJJ_RS00530 -2.4 -14.2 cobalt ECF transporter T component CbiQ compare
MMJJ_RS05070 -2.4 -1.4 DNA primase catalytic subunit PriS compare
MMJJ_RS06760 -2.4 -3.3 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS06180 -2.4 -1.9 tryptophan--tRNA ligase compare
MMJJ_RS08035 -2.3 -6.2 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMJJ_RS01825 -2.3 -5.9 DNA repair and recombination protein RadB compare
MMJJ_RS01690 -2.3 -2.5 methanogenesis marker 12 protein compare
MMJJ_RS00370 -2.3 -1.0 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS01475 -2.3 -1.1 signal recognition particle-docking protein FtsY compare
MMJJ_RS00600 -2.3 -1.8 hydroxymethylbilane synthase compare
MMJJ_RS03240 -2.3 -2.1 histone family protein compare


Specific Phenotypes

For 2 genes in this experiment