Experiment set1IT056 for Methanococcus maripaludis JJ

Compare to:

Formate pooled triplicate planktonic cells

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS08870 +0.9 1.1 2-isopropylmalate synthase compare
MMJJ_RS01210 +0.7 1.7 hypothetical protein compare
MMJJ_RS06275 +0.5 1.7 hypothetical protein compare
MMJJ_RS09325 +0.5 2.7 hypothetical protein compare
MMJJ_RS06540 +0.5 1.8 DUF2120 domain-containing protein compare
MMJJ_RS06770 +0.5 4.3 hypothetical protein compare
MMJJ_RS06710 +0.5 4.1 TldD/PmbA family protein compare
MMJJ_RS06950 +0.5 3.2 4-demethylwyosine synthase TYW1 compare
MMJJ_RS06470 +0.5 3.1 tripartite tricarboxylate transporter permease compare
MMJJ_RS07225 +0.5 3.1 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS07610 +0.5 2.3 DUF2119 domain-containing protein compare
MMJJ_RS06475 +0.4 2.7 AAA family ATPase compare
MMJJ_RS06135 +0.4 3.2 50S ribosomal protein L11 methyltransferase compare
MMJJ_RS07205 +0.4 1.4 MTH895/ArsE family thioredoxin-like protein compare
MMJJ_RS07270 +0.4 2.8 ribonuclease HII compare
MMJJ_RS06460 +0.4 2.4 cytochrome c compare
MMJJ_RS06800 +0.4 2.2 prefoldin subunit alpha compare
MMJJ_RS06585 +0.4 2.7 alanine racemase compare
MMJJ_RS05115 +0.4 1.8 P-II family nitrogen regulator compare
MMJJ_RS07210 +0.4 2.9 AmmeMemoRadiSam system protein B compare
MMJJ_RS07420 +0.4 3.1 protease complex subunit PrcB family protein compare
MMJJ_RS07015 +0.4 0.5 PFL family protein compare
MMJJ_RS06280 +0.4 2.9 hypothetical protein compare
MMJJ_RS05510 +0.4 3.0 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS07690 +0.4 2.5 glycosyltransferase family 4 protein compare
MMJJ_RS06130 +0.4 2.4 hypothetical protein compare
MMJJ_RS07620 +0.4 2.7 class I SAM-dependent rRNA methyltransferase compare
MMJJ_RS07255 +0.4 3.4 hypothetical protein compare
MMJJ_RS06665 +0.4 1.6 DUF3236 domain-containing protein compare
MMJJ_RS06810 +0.4 2.9 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS06105 +0.4 2.7 DUF99 family protein compare
MMJJ_RS07215 +0.4 3.3 TIGR00341 family protein compare
MMJJ_RS02905 +0.4 1.3 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMJJ_RS04375 +0.4 1.8 hypothetical protein compare
MMJJ_RS06630 +0.4 2.7 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS06515 +0.4 2.8 ribonuclease III compare
MMJJ_RS07765 +0.4 1.7 DMT family protein compare
MMJJ_RS07200 +0.4 3.0 MFS transporter compare
MMJJ_RS07240 +0.4 3.1 MBL fold metallo-hydrolase compare
MMJJ_RS06450 +0.4 2.7 DUF3343 domain-containing protein compare
MMJJ_RS06765 +0.4 3.0 hypothetical protein compare
MMJJ_RS06550 +0.4 2.6 ABC transporter permease compare
MMJJ_RS07385 +0.3 2.5 ribosomal protein S18-alanine N-acetyltransferase compare
MMJJ_RS01615 +0.3 1.0 MoaD/ThiS family protein compare
MMJJ_RS06720 +0.3 2.5 mechanosensitive ion channel family protein compare
MMJJ_RS05505 +0.3 3.1 hypothetical protein compare
MMJJ_RS06075 +0.3 2.3 DNA-binding protein Alba compare
MMJJ_RS06445 +0.3 2.7 hypothetical protein compare
MMJJ_RS06685 +0.3 2.8 S-layer protein compare
MMJJ_RS07965 +0.3 1.2 hypothetical protein compare
MMJJ_RS04525 +0.3 1.1 hypothetical protein compare
MMJJ_RS01060 +0.3 1.2 ABC transporter ATP-binding protein compare
MMJJ_RS06465 +0.3 2.0 hypothetical protein compare
MMJJ_RS06495 +0.3 1.1 hypothetical protein compare
MMJJ_RS06960 +0.3 2.8 CAP domain-containing protein compare
MMJJ_RS06120 +0.3 1.9 DUF4013 domain-containing protein compare
MMJJ_RS06575 +0.3 0.4 prephenate dehydrogenase compare
MMJJ_RS08165 +0.3 1.5 thermonuclease family protein compare
MMJJ_RS00305 +0.3 1.9 chemotaxis protein CheC compare
MMJJ_RS07685 +0.3 2.5 glycogen/starch synthase compare
MMJJ_RS06205 +0.3 2.1 EamA family transporter compare
MMJJ_RS05980 +0.3 1.9 DUF5400 domain-containing protein compare
MMJJ_RS02285 +0.3 1.5 class III signal peptide-containing protein compare
MMJJ_RS06555 +0.3 2.5 ATP-binding cassette domain-containing protein compare
MMJJ_RS06640 +0.3 2.0 YfcE family phosphodiesterase compare
MMJJ_RS06430 +0.3 1.8 haloacid dehalogenase compare
MMJJ_RS06580 +0.3 2.3 alanine dehydrogenase compare
MMJJ_RS07825 +0.3 1.8 YciI family protein compare
MMJJ_RS07230 +0.3 1.8 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS07365 +0.3 2.2 CatB-related O-acetyltransferase compare
MMJJ_RS07495 +0.3 2.2 4Fe-4S binding protein compare
MMJJ_RS06055 +0.3 2.1 S-methyl-5-thioribose-1-phosphate isomerase compare
MMJJ_RS07235 +0.3 2.3 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS07450 +0.3 1.5 hypothetical protein compare
MMJJ_RS05400 +0.3 1.0 CoA-binding protein compare
MMJJ_RS03955 +0.3 1.7 hypothetical protein compare
MMJJ_RS07695 +0.3 2.3 glycoside hydrolase family 15 protein compare
MMJJ_RS07445 +0.3 2.1 RlmF-related methyltransferase compare
MMJJ_RS08310 +0.3 1.5 ZIP family metal transporter compare
MMJJ_RS08390 +0.3 1.2 carboxymuconolactone decarboxylase family protein compare
MMJJ_RS01970 +0.3 1.6 hypothetical protein compare
MMJJ_RS08380 +0.3 1.0 hypothetical protein compare
MMJJ_RS07500 +0.3 1.8 hypothetical protein compare
MMJJ_RS04585 +0.3 1.8 phenylacetate--CoA ligase compare
MMJJ_RS02365 +0.3 0.9 DUF2540 domain-containing protein compare
MMJJ_RS06455 +0.3 1.8 YeeE/YedE family protein compare
MMJJ_RS06790 +0.3 2.2 nucleotidyltransferase family protein compare
MMJJ_RS06520 +0.3 2.0 TldD/PmbA family protein compare
MMJJ_RS08630 +0.2 1.4 signal recognition particle subunit SRP19/SEC65 family protein compare
MMJJ_RS06125 +0.2 1.9 methanogenesis marker 16 metalloprotein compare
MMJJ_RS08385 +0.2 1.6 class II SORL domain-containing protein compare
MMJJ_RS04120 +0.2 1.3 amino acid ABC transporter ATP-binding protein compare
MMJJ_RS05985 +0.2 1.7 ABC transporter substrate-binding protein compare
MMJJ_RS08350 +0.2 2.0 heavy metal translocating P-type ATPase compare
MMJJ_RS06235 +0.2 2.1 IGHMBP2 family helicase compare
MMJJ_RS06680 +0.2 1.5 DUF366 family protein compare
MMJJ_RS09360 +0.2 1.7 hypothetical protein compare
MMJJ_RS07700 +0.2 1.9 glycoside hydrolase family 57 protein compare
MMJJ_RS02075 +0.2 0.9 acyl-CoA thioesterase compare
MMJJ_RS07390 +0.2 1.9 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMJJ_RS07220 +0.2 1.7 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS00715 +0.2 1.3 DUF1847 domain-containing protein compare
MMJJ_RS07260 +0.2 1.7 PspC domain-containing protein compare
MMJJ_RS06190 +0.2 1.7 7-cyano-7-deazaguanine synthase compare
MMJJ_RS06340 +0.2 0.5 coenzyme-B sulfoethylthiotransferase subunit alpha compare
MMJJ_RS07480 +0.2 1.8 FAD-dependent oxidoreductase compare
MMJJ_RS09010 +0.2 1.4 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMJJ_RS07800 +0.2 1.8 AMP-binding protein compare
MMJJ_RS09355 +0.2 1.5 hypothetical protein compare
MMJJ_RS04350 +0.2 0.9 hypothetical protein compare
MMJJ_RS04190 +0.2 1.5 hypothetical protein compare
MMJJ_RS09225 +0.2 1.0 hypothetical protein compare
MMJJ_RS03380 +0.2 1.0 hypothetical protein compare
MMJJ_RS08195 +0.2 1.2 DUF4186 domain-containing protein compare
MMJJ_RS02950 +0.2 1.5 epoxyqueuosine reductase compare
MMJJ_RS06080 +0.2 1.5 serine/threonine protein kinase compare
MMJJ_RS03510 +0.2 1.3 acyl-CoA dehydratase activase compare
MMJJ_RS07025 +0.2 1.1 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS03575 +0.2 1.0 NUDIX hydrolase compare
MMJJ_RS08930 +0.2 1.3 5'/3'-nucleotidase SurE compare
MMJJ_RS02875 +0.2 1.5 site-2 protease family protein compare
MMJJ_RS06440 +0.2 1.2 DUF4870 domain-containing protein compare
MMJJ_RS08395 +0.2 1.6 CoB--CoM heterodisulfide reductase subunit B compare
MMJJ_RS01260 +0.2 1.5 hypothetical protein compare
MMJJ_RS06500 +0.2 1.4 class I SAM-dependent methyltransferase compare
MMJJ_RS03450 +0.2 1.3 hypothetical protein compare
MMJJ_RS08400 +0.2 0.8 CoB--CoM heterodisulfide reductase subunit C compare
MMJJ_RS06115 +0.2 1.4 pyruvate kinase compare
MMJJ_RS07795 +0.2 1.4 cupin domain-containing protein compare
MMJJ_RS09020 +0.2 0.9 hypothetical protein compare
MMJJ_RS05700 +0.2 1.5 metallophosphoesterase compare
MMJJ_RS05965 +0.2 1.6 MFS transporter compare
MMJJ_RS09205 +0.2 0.8 hypothetical protein compare
MMJJ_RS05105 +0.2 0.9 P-II family nitrogen regulator compare
MMJJ_RS05875 +0.2 1.7 hypothetical protein compare
MMJJ_RS06140 +0.2 1.5 RimK family alpha-L-glutamate ligase compare
MMJJ_RS05525 +0.2 1.0 GTP-binding protein compare
MMJJ_RS04100 +0.2 1.4 class III signal peptide-containing protein compare
MMJJ_RS00135 +0.2 1.2 FmdE family protein compare
MMJJ_RS02185 +0.2 1.0 TIGR00296 family protein compare
MMJJ_RS04530 +0.2 1.4 iron export ABC transporter permease subunit FetB compare
MMJJ_RS07855 +0.2 1.3 YkgJ family cysteine cluster protein compare
MMJJ_RS08735 +0.2 1.5 hypothetical protein compare
MMJJ_RS01035 +0.2 1.0 hypothetical protein compare
MMJJ_RS00140 +0.2 0.7 hypothetical protein compare
MMJJ_RS05095 +0.2 1.5 ammonium transporter compare
MMJJ_RS01425 +0.2 1.3 cell wall-binding protein compare
MMJJ_RS02355 +0.2 1.3 DUF2798 domain-containing protein compare
MMJJ_RS03770 +0.2 1.4 hypothetical protein compare
MMJJ_RS06160 +0.2 1.4 stage II sporulation protein M compare
MMJJ_RS08365 +0.2 0.6 DsrE family protein compare
MMJJ_RS07010 +0.2 1.0 preprotein translocase subunit Sec61beta compare
MMJJ_RS06285 +0.2 1.1 YchF/TatD family DNA exonuclease compare
MMJJ_RS01510 +0.2 1.1 ATP-binding protein compare
MMJJ_RS03220 +0.2 1.3 inosine/xanthosine triphosphatase compare
MMJJ_RS08635 +0.2 1.1 hypothetical protein compare
MMJJ_RS04780 +0.2 0.7 nucleic acid-binding protein compare
MMJJ_RS02140 +0.2 0.8 preflagellin peptidase FlaK compare
MMJJ_RS04810 +0.2 0.9 nitroreductase family protein compare
MMJJ_RS05990 +0.2 1.1 phosphatase PAP2 family protein compare
MMJJ_RS00555 +0.2 1.0 hypothetical protein compare
MMJJ_RS08490 +0.2 0.7 rubrerythrin family protein compare
MMJJ_RS08885 +0.2 1.2 cysteine--tRNA ligase compare
MMJJ_RS08745 +0.2 1.2 glycosyltransferase family 9 protein compare
MMJJ_RS09065 +0.2 0.8 hypothetical protein compare
MMJJ_RS07885 +0.2 1.2 NERD domain-containing protein compare
MMJJ_RS09245 +0.2 0.7 hypothetical protein compare
MMJJ_RS04720 +0.2 0.2 IMP dehydrogenase compare
MMJJ_RS04855 +0.2 1.1 ECF transporter S component compare
MMJJ_RS05895 +0.1 1.2 ABC transporter permease compare
MMJJ_RS08050 +0.1 1.2 ABC transporter substrate-binding protein compare
MMJJ_RS06085 +0.1 0.7 proteasome assembly chaperone family protein compare
MMJJ_RS08375 +0.1 1.1 ferritin compare
MMJJ_RS05390 +0.1 1.1 tRNA pseudouridine(13) synthase TruD compare
MMJJ_RS08455 +0.1 0.7 tetratricopeptide repeat protein compare
MMJJ_RS05890 +0.1 1.1 molybdate ABC transporter substrate-binding protein compare
MMJJ_RS05880 +0.1 1.3 hypothetical protein compare
MMJJ_RS08345 +0.1 1.2 flavodoxin family protein compare
MMJJ_RS07630 +0.1 1.1 hypothetical protein compare
MMJJ_RS01310 +0.1 1.1 phenylacetate--CoA ligase compare
MMJJ_RS01250 +0.1 0.7 hypothetical protein compare
MMJJ_RS05100 +0.1 1.0 P-II family nitrogen regulator compare
MMJJ_RS01505 +0.1 0.9 DUF2124 domain-containing protein compare
MMJJ_RS00885 +0.1 0.5 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS08215 +0.1 1.0 radical SAM protein compare
MMJJ_RS05975 +0.1 1.0 sulfurtransferase TusA family protein compare
MMJJ_RS07740 +0.1 1.0 DUF2334 domain-containing protein compare
MMJJ_RS05200 +0.1 1.1 TIGR04013 family B12-binding domain/radical SAM domain-containing protein compare
MMJJ_RS05350 +0.1 0.9 DUF192 domain-containing protein compare
MMJJ_RS07645 +0.1 0.9 selenium-binding protein compare
MMJJ_RS01280 +0.1 1.0 hydroxylamine reductase compare
MMJJ_RS04295 +0.1 1.1 DUF2202 domain-containing protein compare
MMJJ_RS08045 +0.1 1.0 transporter substrate-binding domain-containing protein compare
MMJJ_RS04560 +0.1 0.9 ABC transporter permease compare
MMJJ_RS05955 +0.1 1.0 radical SAM protein compare
MMJJ_RS06100 +0.1 1.1 rubrerythrin compare
MMJJ_RS04070 +0.1 1.1 DUF2341 domain-containing protein compare
MMJJ_RS09145 +0.1 0.8 exodeoxyribonuclease III compare
MMJJ_RS05695 +0.1 0.5 class III signal peptide-containing protein compare
MMJJ_RS04945 +0.1 0.8 PLP-dependent aminotransferase family protein compare


Specific Phenotypes

For 2 genes in this experiment