Experiment set1IT055 for Azospirillum brasilense Sp245

Compare to:

LB with Benzethonium chloride 0.003 mM

200 most detrimental genes:

  gene name fitness t score description  
AZOBR_RS23890 +2.7 17.7 sugar ABC transporter permease compare
AZOBR_RS23885 +2.7 10.6 multidrug ABC transporter ATP-binding protein compare
AZOBR_RS02170 +2.4 9.7 glutathione synthetase compare
AZOBR_RS03705 +2.4 6.1 glutathione S-transferase compare
AZOBR_RS06425 +2.3 11.7 NAD(P) transhydrogenase subunit alpha compare
AZOBR_RS06435 +2.3 6.3 NAD synthetase compare
AZOBR_RS08460 +2.3 9.2 enoyl-CoA hydratase compare
AZOBR_RS00450 +2.1 5.0 GCN5 family acetyltransferase compare
AZOBR_RS07455 +2.0 3.4 anthranilate phosphoribosyltransferase compare
AZOBR_RS10140 +2.0 3.2 siroheme synthase compare
AZOBR_RS07450 +2.0 5.0 indole-3-glycerol-phosphate synthase compare
AZOBR_RS01260 +2.0 13.1 enoyl-CoA hydratase compare
AZOBR_RS22055 +2.0 1.9 pyridoxine 5'-phosphate synthase compare
AZOBR_RS01915 +1.9 10.5 beta-lactamase compare
AZOBR_RS09745 +1.9 14.8 glutathione reductase compare
AZOBR_RS20445 +1.9 2.7 glutathione S-transferase compare
AZOBR_RS17315 +1.8 1.8 tRNA-Val compare
AZOBR_RS03215 +1.8 1.7 hypothetical protein compare
AZOBR_RS33940 +1.7 14.8 putative Glycosyl transferase group 1 compare
AZOBR_RS21760 +1.7 7.5 peptide ABC transporter substrate-binding protein compare
AZOBR_RS02295 +1.7 2.3 aspartate aminotransferase compare
AZOBR_RS02435 +1.7 9.6 mechanosensitive ion channel protein compare
AZOBR_RS00140 +1.6 4.1 peptidase S16 compare
AZOBR_RS12950 +1.6 2.7 chemotaxis protein compare
AZOBR_RS33935 +1.6 7.7 hypothetical protein compare
AZOBR_RS19110 +1.6 1.1 PadR family transcripitonal regulator compare
AZOBR_RS30470 +1.6 4.8 phosphoenolpyruvate-protein phosphotransferase compare
AZOBR_RS33825 +1.5 4.8 hypothetical protein compare
AZOBR_RS30475 +1.5 1.9 HPr kinase compare
AZOBR_RS14300 +1.5 5.5 hypothetical protein compare
AZOBR_RS09935 +1.5 1.8 hypothetical protein compare
AZOBR_RS20625 +1.5 1.9 Holliday junction resolvase compare
AZOBR_RS33925 +1.4 5.1 ABC transporter compare
AZOBR_RS29240 +1.4 2.0 hypothetical protein compare
AZOBR_RS26660 +1.4 1.9 signal peptidase II compare
AZOBR_RS03445 +1.4 5.1 phosphoglycerate mutase compare
AZOBR_RS03270 +1.4 1.4 exported protein of unknown function compare
AZOBR_RS28005 +1.4 1.4 hypothetical protein compare
AZOBR_RS01720 +1.4 4.9 preprotein translocase subunit SecB compare
AZOBR_RS07050 +1.4 4.3 transcriptional regulator compare
AZOBR_RS14335 +1.4 0.7 hypothetical protein compare
AZOBR_RS24655 +1.3 1.6 hypothetical protein compare
AZOBR_RS32000 +1.3 1.6 hypothetical protein compare
AZOBR_RS28125 +1.3 0.9 3-carboxy-cis cis-muconate cycloisomerase compare
AZOBR_RS22865 +1.3 1.1 hypothetical protein compare
AZOBR_RS21710 +1.3 2.3 conserved membrane protein of unknown function compare
AZOBR_RS11640 +1.3 1.3 MarR family transcriptional regulator compare
AZOBR_RS11900 +1.3 4.5 hypothetical protein compare
AZOBR_RS17540 +1.3 2.3 hypothetical protein compare
AZOBR_RS30410 +1.3 1.7 ABC transporter ATP-binding protein compare
AZOBR_RS08305 +1.3 3.1 oxidoreductase compare
AZOBR_RS16240 +1.3 2.1 phosphohistidine phosphatase compare
AZOBR_RS21260 +1.2 2.5 hypothetical protein compare
AZOBR_RS00050 +1.2 1.8 transposase compare
AZOBR_RS33930 +1.2 3.8 sugar ABC transporter ATP-binding protein compare
AZOBR_RS19260 +1.2 2.4 hypothetical protein compare
AZOBR_RS07920 +1.2 0.9 NAD synthetase compare
AZOBR_RS29090 +1.2 1.9 hypothetical protein compare
AZOBR_RS05800 +1.2 5.8 membrane protein compare
AZOBR_RS33465 +1.2 2.3 GDP-mannose 4 6-dehydratase compare
AZOBR_RS10605 +1.2 1.9 amino acid-binding protein compare
AZOBR_RS09625 +1.2 1.1 hypothetical protein compare
AZOBR_RS01955 +1.2 1.1 glycosyltransferase 28 domain protein compare
AZOBR_RS30530 +1.2 6.9 peptidase M23 compare
AZOBR_RS17470 +1.2 1.0 hypothetical protein compare
AZOBR_RS21770 +1.1 5.0 peptide ABC transporter compare
AZOBR_RS23955 +1.1 1.5 potassium transporter TrkH compare
AZOBR_RS13820 +1.1 1.6 hypothetical protein compare
AZOBR_RS06150 +1.1 1.6 small protein containing a coiled-coil domain containing protein compare
AZOBR_RS14130 +1.1 3.8 3-isopropylmalate dehydrogenase compare
AZOBR_RS05320 +1.1 4.1 electron transporter SenC compare
AZOBR_RS13805 +1.1 1.6 hypothetical protein compare
AZOBR_RS00690 +1.1 1.0 ATP-binding protein compare
AZOBR_RS01480 +1.1 5.2 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
AZOBR_RS26485 +1.1 1.3 enoyl-CoA hydratase compare
AZOBR_RS06940 +1.1 1.6 glycine cleavage system protein T compare
AZOBR_RS02135 +1.1 1.7 hypothetical protein compare
AZOBR_RS08630 +1.1 1.0 putative NADH-ubiquinone oxidoreductase compare
AZOBR_RS16905 +1.1 2.4 cob(I)yrinic acid a c-diamide adenosyltransferase compare
AZOBR_RS31555 +1.1 4.1 2-methylcitrate dehydratase compare
AZOBR_RS16450 +1.1 3.3 ATPase compare
AZOBR_RS00520 +1.1 2.9 tryptophan synthase subunit alpha compare
AZOBR_RS33810 +1.1 7.3 hypothetical protein compare
AZOBR_RS19020 +1.1 3.7 multidrug ABC transporter permease compare
AZOBR_RS10945 +1.1 1.4 arsenate reductase compare
AZOBR_RS07060 +1.1 0.8 hypothetical protein compare
AZOBR_RS17600 +1.0 2.1 membrane protein compare
AZOBR_RS26550 +1.0 0.9 putative enoyl-CoA hydratase/isomerase compare
AZOBR_RS05830 +1.0 1.6 Rrf2 family transcriptional regulator compare
AZOBR_RS07470 +1.0 1.5 hypothetical protein compare
AZOBR_RS01540 +1.0 5.5 hypothetical protein compare
AZOBR_RS00190 +1.0 6.6 L-glutamate dehydrogenase (NAD+) (EC 1.4.1.2) (from data) compare
AZOBR_RS08660 +1.0 3.2 ABC transporter permease compare
AZOBR_RS22215 +1.0 2.0 alpha/beta hydrolase compare
AZOBR_RS03695 +1.0 1.5 NAD synthetase compare
AZOBR_RS23610 +1.0 0.9 hypothetical protein compare
AZOBR_RS25095 +1.0 1.4 hypothetical protein compare
AZOBR_RS19870 +1.0 0.6 hypothetical protein compare
AZOBR_RS20655 +1.0 3.7 histidine kinase compare
AZOBR_RS14855 +1.0 1.8 hypothetical protein compare
AZOBR_RS18785 +1.0 1.5 conserved hypothetical protein; putative signal peptide compare
AZOBR_RS02165 +1.0 2.9 hypothetical protein compare
AZOBR_RS22120 +1.0 2.8 hypothetical protein compare
AZOBR_RS32910 +1.0 2.8 membrane protein of unknown function compare
AZOBR_RS08715 +1.0 1.9 serine protease compare
AZOBR_RS10235 +1.0 0.9 cobalamin biosynthesis protein CobD compare
AZOBR_RS33460 +0.9 3.6 glycosyl transferase group 1 compare
AZOBR_RS15085 +0.9 1.4 exported protein of unknown function compare
AZOBR_RS21880 +0.9 2.9 TPR repeat-containing protein compare
AZOBR_RS06370 +0.9 1.0 hypothetical protein compare
AZOBR_RS00430 +0.9 3.8 ABC transporter ATP-binding protein compare
AZOBR_RS31235 +0.9 0.8 transcriptional regulator compare
AZOBR_RS03895 +0.9 1.8 hypothetical protein compare
AZOBR_RS11710 +0.9 1.2 urea ABC transporter ATP-binding protein compare
AZOBR_RS25575 +0.9 6.3 phosphatidylethanolamine N-methyltransferase compare
AZOBR_RS14765 +0.9 2.0 hypothetical protein compare
AZOBR_RS01545 +0.9 3.1 permease compare
AZOBR_RS31715 +0.9 1.1 hypothetical protein compare
AZOBR_RS12825 +0.9 4.4 cytochrome B561 compare
AZOBR_RS28895 +0.9 0.7 hypothetical protein compare
AZOBR_RS28095 +0.9 1.1 transporter compare
AZOBR_RS32320 +0.9 1.6 LacI family transcriptional regulator compare
AZOBR_RS25240 +0.9 0.9 hypothetical protein compare
AZOBR_RS01325 +0.9 1.2 2-hydroxyacid dehydrogenase compare
AZOBR_RS15730 +0.9 1.9 enoyl-CoA hydratase compare
AZOBR_RS27285 +0.9 2.7 sugar ABC transporter substrate-binding protein compare
AZOBR_RS04950 +0.9 2.6 polyketide cyclase compare
AZOBR_RS07685 +0.9 1.0 hypothetical protein compare
AZOBR_RS15910 +0.9 3.4 hypothetical protein compare
AZOBR_RS21285 +0.9 1.4 hypothetical protein compare
AZOBR_RS14235 +0.9 1.6 chemotaxis protein CheA compare
AZOBR_RS08795 +0.9 2.3 LuxR family transcriptional regulator compare
AZOBR_RS24975 +0.9 0.6 hypothetical protein compare
AZOBR_RS08535 +0.9 3.3 xanthine dehydrogenase compare
AZOBR_RS16725 +0.9 1.6 cobalt-precorrin-6A synthase compare
AZOBR_RS10755 +0.9 2.2 hypothetical protein compare
AZOBR_RS11685 +0.9 2.2 hypothetical protein compare
AZOBR_RS22185 +0.9 2.4 hypothetical protein compare
AZOBR_RS26985 +0.9 2.5 hemerythrin compare
AZOBR_RS14070 +0.9 2.5 succinyl-CoA synthetase subsunit alpha compare
AZOBR_RS01635 +0.9 0.7 XRE family transcriptional regulator compare
AZOBR_RS33060 +0.9 1.2 hypothetical protein compare
AZOBR_RS02995 +0.9 1.5 transcriptional regulator compare
AZOBR_RS18810 +0.9 1.5 acetyltransferase compare
AZOBR_RS22860 +0.9 3.1 metallo-beta-lactamase compare
AZOBR_RS09910 +0.8 0.9 hypothetical protein compare
AZOBR_RS00030 +0.8 0.7 6S compare
AZOBR_RS17575 +0.8 0.7 tRNA-Asn compare
AZOBR_RS21040 +0.8 1.8 hypothetical protein compare
AZOBR_RS31580 +0.8 1.3 3-oxoacyl-ACP reductase compare
AZOBR_RS04220 +0.8 1.5 hypothetical protein compare
AZOBR_RS21810 +0.8 1.9 nucleotide-binding protein compare
AZOBR_RS20230 +0.8 3.4 acyl-CoA dehydrogenase compare
AZOBR_RS09280 +0.8 2.4 Fur family transcriptional regulator compare
AZOBR_RS10000 +0.8 1.5 hypothetical protein compare
AZOBR_RS13075 +0.8 2.2 sulfonate ABC transporter ATP-binding protein compare
AZOBR_RS00625 +0.8 1.6 IclR family transcriptional regulator compare
AZOBR_RS14755 +0.8 1.2 RNA polymerase sigma-70 factor compare
AZOBR_RS17140 +0.8 1.0 putative low-affinity phosphate transport accessory protein compare
AZOBR_RS21765 +0.8 1.9 peptide ABC transporter permease compare
AZOBR_RS02360 +0.8 2.3 hypothetical protein compare
AZOBR_RS09300 +0.8 0.9 phosphoesterase compare
AZOBR_RS01485 +0.8 3.1 hemolysin-like protein compare
AZOBR_RS25805 +0.8 1.2 hypothetical protein compare
AZOBR_RS28970 +0.8 0.8 hypothetical protein compare
AZOBR_RS13175 +0.8 2.9 1 2-oxophytodienoate reductase compare
AZOBR_RS11055 +0.8 1.4 phosphohydrolase compare
AZOBR_RS33885 +0.8 2.2 hypothetical protein compare
AZOBR_RS01550 +0.8 3.0 carbohydrate kinase compare
AZOBR_RS17115 +0.8 1.0 hypothetical protein compare
AZOBR_RS19550 +0.8 1.2 tRNA-Phe compare
AZOBR_RS21480 +0.8 3.0 adenine phosphoribosyltransferase compare
AZOBR_RS21735 +0.8 2.2 hypothetical protein compare
AZOBR_RS08880 +0.8 0.7 hypothetical protein compare
AZOBR_RS19525 +0.8 1.7 hypothetical protein compare
AZOBR_RS01670 +0.8 2.7 imidazole glycerol phosphate synthase compare
AZOBR_RS33655 +0.8 2.4 uridine kinase compare
AZOBR_RS20560 +0.8 2.5 hypothetical protein compare
AZOBR_RS31410 +0.8 4.3 aldo/keto reductase compare
AZOBR_RS21665 +0.8 1.3 hypothetical protein compare
AZOBR_RS01280 +0.8 1.2 hypothetical protein compare
AZOBR_RS31925 +0.8 0.9 MerR family transcriptional regulator compare
AZOBR_RS06120 +0.8 2.4 fumarate hydratase compare
AZOBR_RS15645 +0.8 1.2 short-chain dehydrogenase compare
AZOBR_RS16030 +0.8 1.6 ABC transporter permease compare
AZOBR_RS08325 +0.8 1.3 methionine aminopeptidase compare
AZOBR_RS27855 +0.8 1.5 transcriptional regulator compare
AZOBR_RS03400 +0.8 1.8 membrane protein compare
AZOBR_RS31675 +0.8 2.7 uracil transporter compare
AZOBR_RS18690 +0.8 2.3 quinolinate synthetase compare
AZOBR_RS08025 +0.8 1.6 hypothetical protein compare
AZOBR_RS32170 +0.8 1.7 hypothetical protein compare
AZOBR_RS12495 +0.8 3.4 acetate kinase compare
AZOBR_RS11790 +0.8 1.4 hypothetical protein compare
AZOBR_RS01315 +0.8 2.3 GCN5 family N-acetyltransferase compare
AZOBR_RS07975 +0.8 1.6 GntR family transcriptional regulator compare
AZOBR_RS08765 +0.8 1.5 membrane protein compare
AZOBR_RS25440 +0.8 1.2 hypothetical protein compare
AZOBR_RS29380 +0.8 1.1 ATPase AAA compare
AZOBR_RS33300 +0.8 0.7 hypothetical protein compare


Specific Phenotypes

For 7 genes in this experiment

For stress Benzethonium chloride in Azospirillum brasilense Sp245

For stress Benzethonium chloride across organisms