Experiment set1IT050 for Caulobacter crescentus NA1000

Compare to:

Beta-Lactose carbon source

200 most detrimental genes:

  gene name fitness t score description  
CCNA_01851 +3.7 27.8 quinol cytochrome oxidase polypeptide II compare
CCNA_02028 +3.7 5.5 NTF2 superfamily protein compare
CCNA_01848 +3.6 22.1 quinol cytochrome oxidase polypeptide IV compare
CCNA_03280 +3.6 27.2 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_02026 +3.6 16.0 hypothetical protein compare
CCNA_02030 +3.5 14.2 hypothetical protein compare
CCNA_00769 +3.3 12.7 TetR family transcriptional regulator compare
CCNA_01850 +3.3 22.6 quinol cytochrome oxidase polypeptide I compare
CCNA_01849 +3.2 15.7 quinol cytochrome oxidase polypeptide III compare
CCNA_00264 +3.2 20.7 C4-dicarboxylate transport protein compare
CCNA_00699 +3.2 14.2 LSU ribosomal protein L28P compare
CCNA_02646 +3.1 4.2 cell division protein MraZ compare
CCNA_02021 +3.0 9.3 hypothetical protein compare
CCNA_01593 +3.0 17.2 Xaa-pro aminopeptidase compare
CCNA_03961 +3.0 9.3 hypothetical protein compare
CCNA_R0037 +2.9 11.6 tRNA-Glu compare
CCNA_01780 +2.9 20.0 exopolyphosphatase compare
CCNA_01840 +2.9 23.8 MerR-family transcriptional regulator compare
CCNA_03936 +2.9 7.3 hypothetical protein compare
CCNA_03064 +2.9 16.8 PadR-family transcriptional regulator compare
CCNA_03524 +2.8 16.9 di-/tripeptide transporter compare
CCNA_01526 +2.8 9.5 flagellar biosynthesis regulatory protein flaF compare
CCNA_01684 +2.8 12.7 phenylalanine-4-hydroxylase compare
CCNA_01712 +2.8 18.4 CopY/TcrY family transcriptional repressor compare
CCNA_00518 +2.8 17.7 LSU ribosomal protein L25P compare
CCNA_03271 +2.8 16.8 methionine gamma-lyase compare
CCNA_02025 +2.8 6.7 hypothetical protein compare
CCNA_00161 +2.7 20.2 hypothetical protein compare
CCNA_02066 +2.7 17.8 phytoene/squalene synthase family protein compare
CCNA_03289 +2.7 18.1 HicB-family RNA-binding protein compare
CCNA_02644 +2.7 7.5 cell division protein FtsL compare
CCNA_00939 +2.7 8.6 MarR-family transcriptional regulator compare
CCNA_03012 +2.7 13.0 peroxiredoxin compare
CCNA_00296 +2.7 14.4 phosphate regulon response regulator PhoB compare
CCNA_01742 +2.7 10.9 hypothetical protein compare
CCNA_02103 +2.6 17.5 hypothetical protein compare
CCNA_01979 +2.6 7.5 LexA repressor compare
CCNA_03252 +2.6 20.3 CopY/TcrY-family transcriptional regulator compare
CCNA_00846 +2.6 20.5 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_02447 +2.6 15.8 PspA/IM30 family regulatory protein compare
CCNA_01573 +2.6 12.8 ArsR-family transcriptional regulator compare
CCNA_02980 +2.6 15.5 tryptophan 2,3-dioxygenase compare
CCNA_03287 +2.5 13.2 PadR-family transcriptional regulator compare
CCNA_01913 +2.5 15.2 MarR-family transcriptional regulator compare
CCNA_02619 +2.5 18.6 stomatin/prohibitin-related protein compare
CCNA_02957 +2.5 8.3 ArsR-family transcriptional regulator compare
CCNA_01094 +2.5 5.1 hypothetical protein compare
CCNA_01420 +2.5 15.2 NrdR family transcriptional regulator compare
CCNA_01847 +2.5 16.2 cytochrome c oxidase assembly protein Surf1 compare
CCNA_03479 +2.5 11.9 MarR-family transcriptional regulator compare
CCNA_01801 +2.5 10.4 hypothetical protein compare
CCNA_03951 +2.5 11.0 hypothetical protein compare
CCNA_03612 +2.4 12.1 HTH XRE-family transcriptional regulator compare
CCNA_03824 +2.4 15.9 2-polyprenylphenol 6-hydroxylase accessory protein UbiB compare
CCNA_02448 +2.4 14.4 hypothetical protein compare
CCNA_03989 +2.4 17.5 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_03043 +2.4 7.1 type IV pilin protein pilA compare
CCNA_01453 +2.4 6.0 electron transport complex I subunit, NADH-ubiquinone oxidoreductase compare
CCNA_02617 +2.4 15.9 histidinol-phosphate aminotransferase compare
CCNA_00527 +2.4 11.5 hypothetical protein compare
CCNA_01931 +2.4 13.3 TetR-family transcriptional regulator compare
CCNA_00028 +2.3 9.5 TonB-dependent receptor compare
CCNA_03689 +2.3 14.8 alanine dehydrogenase compare
CCNA_01541 +2.3 14.5 LysR-family transcriptional regulator compare
CCNA_01681 +2.3 7.5 RimI-like acetyltransferase compare
CCNA_02416 +2.3 10.7 DNA-binding protein HU compare
CCNA_02616 +2.3 13.7 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_00756 +2.3 5.1 hypothetical protein compare
CCNA_03123 +2.3 13.8 ArsR-family transcriptional regulator compare
CCNA_03959 +2.3 1.7 hypothetical protein compare
CCNA_03030 +2.3 9.3 cytochrome c2 compare
CCNA_01059 +2.3 17.6 S-layer protein rsaA compare
CCNA_01186 +2.2 10.2 hypothetical protein compare
CCNA_01804 +2.2 12.1 glutathione peroxidase compare
CCNA_03762 +2.2 6.1 acetolactate synthase-related protein compare
CCNA_03643 +2.2 2.8 succinate dehydrogenase membrane anchor subunit compare
CCNA_03808 +2.2 12.3 organic solvent resistance transport system Ttg2C protein compare
CCNA_00847 +2.2 10.0 leucine-responsive regulatory protein compare
CCNA_03325 +2.2 7.5 hypothetical protein compare
CCNA_01525 +2.2 10.0 flagellar biosynthesis repressor flbT compare
CCNA_03108 +2.2 15.7 TonB-dependent outer membrane receptor compare
CCNA_03062 +2.2 12.4 cell wall hydrolase family protein compare
CCNA_01752 +2.2 10.8 YicC-family protein compare
CCNA_02000 +2.2 1.8 SSU ribosomal protein S2P compare
CCNA_00998 +2.2 9.9 ROS/MUCR transcriptional regulator compare
CCNA_01528 +2.2 11.8 flagellin fljK compare
CCNA_01790 +2.2 7.0 protein translocase subunit secG compare
CCNA_01699 +2.2 10.3 LacI-family transcriptional regulator compare
CCNA_03281 +2.1 18.2 AsnC-family transcriptional regulator compare
CCNA_01802 +2.1 3.9 hypothetical protein compare
CCNA_01655 +2.1 9.9 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_01242 +2.1 18.2 amino acid permease compare
CCNA_02576 +2.1 11.6 phosphoribosylamidoimidazole-succinocarboxamide synthase compare
CCNA_01942 +2.1 8.1 Rrf2 family protein compare
CCNA_00162 +2.1 9.2 hypothetical protein compare
CCNA_00207 +2.1 9.4 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B compare
CCNA_03214 +2.1 8.7 hypothetical protein compare
CCNA_03372 +2.1 5.6 bacterioferritin-associated ferredoxin compare
CCNA_00895 +2.1 10.6 hypothetical protein compare
CCNA_03519 +2.1 6.9 PadR-family transcriptional regulator compare
CCNA_00705 +2.1 6.9 hypothetical protein compare
CCNA_00255 +2.1 5.6 esterase compare
CCNA_02004 +2.0 3.3 SOS-induced inhibitor of cell division SidA compare
CCNA_03089 +2.0 9.2 hypothetical protein compare
CCNA_00447 +2.0 10.0 chemotaxis protein cheD compare
CCNA_01181 +2.0 9.4 hypothetical protein compare
CCNA_02942 +2.0 5.8 nucleoside-diphosphate-sugar epimerase compare
CCNA_01680 +2.0 11.5 succinylarginine dihydrolase compare
CCNA_02728 +2.0 9.2 hypothetical protein compare
CCNA_02339 +2.0 11.2 methyltransferase compare
CCNA_01926 +2.0 8.3 GGDEF diguanylate cyclase DgcB compare
CCNA_01679 +2.0 9.8 succinylglutamic semialdehyde dehydrogenase compare
CCNA_01008 +2.0 13.2 urocanate hydratase compare
CCNA_03964 +2.0 3.3 hypothetical protein compare
CCNA_01193 +2.0 14.0 amylosucrase compare
CCNA_00441 +2.0 8.5 chemotaxis receiver domain protein cheYI compare
CCNA_03379 +1.9 2.9 Cro/CI family transcriptional regulator compare
CCNA_03129 +1.9 10.3 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_03688 +1.9 9.7 AsnC-family transcriptional regulator compare
CCNA_01393 +1.9 12.6 soluble lytic murein transglycosylase compare
CCNA_02575 +1.9 5.7 hypothetical protein compare
CCNA_01677 +1.9 8.9 carboxypeptidase G2 precursor compare
CCNA_01011 +1.9 7.7 imidazolonepropionase compare
CCNA_01619 +1.9 9.1 NYN domain protein compare
CCNA_01678 +1.9 8.7 arginine N-succinyltransferase, beta chain compare
CCNA_01827 +1.9 8.3 cobyric acid synthase CobQ compare
CCNA_01505 +1.9 3.7 hypothetical protein compare
CCNA_02151 +1.9 6.9 exodeoxyribonuclease VII small subunit compare
CCNA_00834 +1.9 7.5 flagellin FljM compare
CCNA_00929 +1.9 12.4 Riboflavin-specific deaminase family protein compare
CCNA_00675 +1.9 6.9 VapC-like PIN domain ribonuclease compare
CCNA_00027 +1.8 3.9 2OG-Fe(II) oxygenase compare
CCNA_00931 +1.8 12.1 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase compare
CCNA_01266 +1.8 7.8 NTF2 superfamily protein compare
CCNA_00803 +1.8 7.6 chemotaxis protein cheW compare
CCNA_02330 +1.8 7.0 hypothetical protein compare
CCNA_00947 +1.8 13.2 flagellar hook protein FlgE compare
CCNA_01964 +1.8 5.3 NADH dehydrogenase compare
CCNA_00400 +1.8 7.7 MarR/EmrR-family transcriptional regulator compare
CCNA_02805 +1.8 7.2 hypothetical protein compare
CCNA_01949 +1.8 4.9 bactofilin A BacA compare
CCNA_03215 +1.8 10.6 ARO8 family aminotransferase/HTH DNA-binding protein compare
CCNA_03740 +1.8 8.2 cysteine synthase compare
CCNA_03805 +1.8 11.4 PadR-family transcriptional regulator compare
CCNA_02467 +1.8 9.7 polyisoprenylphosphate hexose-1-phosphotransferase pssZ compare
CCNA_02614 +1.8 10.1 fumarylacetoacetase superfamily protein compare
CCNA_02073 +1.8 4.8 cupin domain transcriptional regulator compare
CCNA_01690 +1.8 4.8 MAPEG family membrane protein compare
CCNA_02729 +1.8 13.0 oligopeptide transporter compare
CCNA_02273 +1.8 5.7 glutathione peroxidase compare
CCNA_02164 +1.8 5.2 glutamate dehydrogenase/leucine dehydrogenase compare
CCNA_01020 +1.8 7.2 LacI-family transcriptional regulator compare
CCNA_03391 +1.8 9.9 Cro/CI family transcriptional regulator compare
CCNA_00930 +1.8 11.8 riboflavin synthase alpha chain compare
CCNA_03893 +1.8 3.9 hypothetical protein compare
CCNA_01339 +1.8 7.1 ArsR-family transcriptional regulator compare
CCNA_00210 +1.8 13.0 TonB-dependent receptor compare
CCNA_01173 +1.8 7.4 chorismate mutase compare
CCNA_00443 +1.7 7.9 chemotaxis protein cheW compare
CCNA_00448 +1.7 9.6 cheU protein compare
CCNA_01406 +1.7 7.3 metal-dependent hydrolase compare
CCNA_02338 +1.7 9.7 hypothetical protein compare
CCNA_00129 +1.7 7.0 hypothetical protein compare
CCNA_03107 +1.7 7.8 cytidine deaminase compare
CCNA_01728 +1.7 8.3 short chain dehydrogenase compare
CCNA_00440 +1.7 4.2 STAS domain protein compare
CCNA_02324 +1.7 9.1 heat shock protein 33 hsp33 compare
CCNA_00768 +1.7 3.5 hypothetical protein compare
CCNA_03622 +1.7 8.9 beta-lactamase repressor compare
CCNA_02534 +1.7 2.3 hypothetical protein compare
CCNA_01414 +1.7 10.5 3-hydroxyisobutyryl-CoA hydrolase compare
CCNA_02732 +1.7 3.3 hypothetical protein compare
CCNA_00944 +1.7 8.0 flagellar hook length determination protein compare
CCNA_02287 +1.7 9.2 TetR-family transcriptional regulator compare
CCNA_00919 +1.7 3.6 hypothetical protein compare
CCNA_02341 +1.7 8.0 small heat shock protein compare
CCNA_03954 +1.7 1.9 hypothetical protein compare
CCNA_01361 +1.7 3.5 PepSY superfamily protein compare
CCNA_00147 +1.7 1.8 hypothetical protein compare
CCNA_02976 +1.7 7.7 MCP-signal associated domain protein compare
CCNA_01583 +1.7 3.4 phosphate-binding protein compare
CCNA_02063 +1.7 7.5 beta-barrel assembly machine (BAM) protein BamD compare
CCNA_02171 +1.7 10.9 nucleoside permease nupC compare
CCNA_02379 +1.7 8.6 hypothetical protein compare
CCNA_00945 +1.7 8.0 chemotaxis protein MotD compare
CCNA_00954 +1.7 11.2 AAA-family response regulator flbD compare
CCNA_01533 +1.7 6.7 hypothetical protein compare
CCNA_01608 +1.7 7.4 TetR-family transcriptional regulator compare
CCNA_03810 +1.6 8.7 organic solvent resistance transport system ATP-binding protein compare
CCNA_01006 +1.6 5.1 flagellar hook-basal body complex protein FliE compare
CCNA_01415 +1.6 11.7 methyltransferase compare
CCNA_00031 +1.6 8.1 toxin protein VapC compare
CCNA_01025 +1.6 9.3 hypothetical protein compare
CCNA_01057 +1.6 9.9 hypothetical protein compare
CCNA_01163 +1.6 15.1 ice nucleation protein compare
CCNA_02297 +1.6 6.9 hypoxanthine-guanine phosphoribosyltransferase compare
CCNA_00163 +1.6 9.1 exopolysaccharide transport family protein compare
CCNA_00946 +1.6 8.0 Basal-body rod modification protein FlgD compare
CCNA_00992 +1.6 10.9 hypothetical protein compare
CCNA_01412 +1.6 9.9 acyl-CoA dehydrogenase, short-chain specific compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source Beta-Lactose in Caulobacter crescentus NA1000

For carbon source Beta-Lactose across organisms