Experiment set1IT047 for Phocaeicola vulgatus CL09T03C04

Compare to:

Polygalacturonic acid 5 mg/ml carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
HMPREF1058_RS07330 -3.4 -14.7 efflux RND transporter permease subunit compare
HMPREF1058_RS07325 -2.5 -7.4 efflux RND transporter periplasmic adaptor subunit compare
HMPREF1058_RS07320 -2.0 -5.5 AraC family transcriptional regulator compare
HMPREF1058_RS00400 -1.9 -7.2 GntR family transcriptional regulator compare
HMPREF1058_RS11565 -1.5 -7.8 murein L,D-transpeptidase catalytic domain family protein compare
HMPREF1058_RS15385 -1.4 -5.5 metallophosphoesterase compare
HMPREF1058_RS12120 -1.3 -5.4 RNA polymerase sigma factor compare
HMPREF1058_RS15510 +1.1 6.8 xanthan lyase compare
HMPREF1058_RS11410 +1.3 7.4 PD40 domain-containing protein compare
HMPREF1058_RS01920 +1.5 5.4 hypothetical protein compare
HMPREF1058_RS18775 +1.6 6.6 S9 family peptidase compare
HMPREF1058_RS06765 +1.7 7.3 glycosyltransferase family 1 protein compare
HMPREF1058_RS09175 +1.7 5.1 RNA polymerase sigma factor compare
HMPREF1058_RS11830 +1.8 10.6 hypothetical protein compare
HMPREF1058_RS01225 +2.2 8.6 HAD family phosphatase compare
HMPREF1058_RS06735 +2.3 6.9 ABC transporter permease compare
HMPREF1058_RS06715 +2.4 8.0 glycosyltransferase compare
HMPREF1058_RS06725 +2.7 13.4 glycosyl transferase compare
HMPREF1058_RS06710 +2.7 8.1 DUF4422 domain-containing protein compare
HMPREF1058_RS06740 +2.9 10.7 glycosyltransferase compare
HMPREF1058_RS17655 +3.8 7.7 AbgT family transporter compare


Specific phenotypes for carbon source polygalacturonic acid across organisms